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MC06g0568 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0568
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC06:4605473..4605650
RNA-Seq ExpressionMC06g0568
SyntenyMC06g0568
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR018188 - Ribonuclease T2, His active site 1
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152675.1 ribonuclease MC [Momordica charantia]2.70e-1251.52Show/hide
Query:  PKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKNTS--------FTIHGLWPRNRGTS
        PK ++ +  A  I+ L+A S  FDSFWFVQQWPP VC   K+ S        FTIHGLWP+  GTS
Subjt:  PKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKNTS--------FTIHGLWPRNRGTS

XP_022934270.1 ribonuclease MC-like [Cucurbita moschata]1.14e-1456.72Show/hide
Query:  PKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVC---------KSTKNTSFTIHGLWPRNRGTS
        P TQI L+FAF I   +A S  FD FWFVQQWPP VC         + TK  SFTIHGLWP+ RG S
Subjt:  PKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVC---------KSTKNTSFTIHGLWPRNRGTS

XP_022935695.1 ribonuclease MC-like [Cucurbita moschata]4.77e-1351.52Show/hide
Query:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKN-------TSFTIHGLWPRNRGTS
        TP TQI L+F F+    +A S  FD FWFVQQWPP VC             SFTIHGLWP+  G S
Subjt:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKN-------TSFTIHGLWPRNRGTS

XP_022983351.1 ribonuclease MC-like [Cucurbita maxima]2.92e-1556.06Show/hide
Query:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCK-------STKNTSFTIHGLWPRNRGTS
        TP TQI L+FAF I   +A S  FD FWFVQQWPP VC             SFTIHGLWP+ RG S
Subjt:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCK-------STKNTSFTIHGLWPRNRGTS

XP_023528964.1 ribonuclease MC-like [Cucurbita pepo subsp. pepo]3.63e-1251.52Show/hide
Query:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKN-------TSFTIHGLWPRNRGTS
        TP TQI L+F F I      S  FD FWFVQQWPP VC             SFTIHGLWP+  G S
Subjt:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKN-------TSFTIHGLWPRNRGTS

TrEMBL top hitse value%identityAlignment
A0A6J1DEL7 Ribonuclease T(2)1.31e-1251.52Show/hide
Query:  PKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKNTS--------FTIHGLWPRNRGTS
        PK ++ +  A  I+ L+A S  FDSFWFVQQWPP VC   K+ S        FTIHGLWP+  GTS
Subjt:  PKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKNTS--------FTIHGLWPRNRGTS

A0A6J1E0T7 Ribonuclease T(2)2.72e-1251.52Show/hide
Query:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCK-------STKNTSFTIHGLWPRNRGTS
        T +T IL +    + F +ANS TFDSFWFVQQWPP VC             SFTIHGLWP+   TS
Subjt:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCK-------STKNTSFTIHGLWPRNRGTS

A0A6J1F776 Ribonuclease T(2)5.51e-1556.72Show/hide
Query:  PKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVC---------KSTKNTSFTIHGLWPRNRGTS
        P TQI L+FAF I   +A S  FD FWFVQQWPP VC         + TK  SFTIHGLWP+ RG S
Subjt:  PKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVC---------KSTKNTSFTIHGLWPRNRGTS

A0A6J1FBD8 Ribonuclease T(2)2.31e-1351.52Show/hide
Query:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKN-------TSFTIHGLWPRNRGTS
        TP TQI L+F F+    +A S  FD FWFVQQWPP VC             SFTIHGLWP+  G S
Subjt:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKN-------TSFTIHGLWPRNRGTS

A0A6J1J1Y7 Ribonuclease T(2)1.41e-1556.06Show/hide
Query:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCK-------STKNTSFTIHGLWPRNRGTS
        TP TQI L+FAF I   +A S  FD FWFVQQWPP VC             SFTIHGLWP+ RG S
Subjt:  TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCK-------STKNTSFTIHGLWPRNRGTS

SwissProt top hitse value%identityAlignment
O80322 Ribonuclease S-14.3e-0437.5Show/hide
Query:  LIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKST-------KNTSFTIHGLWPRNR
        ++F+ I+  L +++  +D F F QQ+ P VC S         +  FT+HGLWP NR
Subjt:  LIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKST-------KNTSFTIHGLWPRNR

P23540 Ribonuclease MC1.7e-0861.36Show/hide
Query:  FDSFWFVQQWPPEVCKSTKNTS--------FTIHGLWPRNRGTS
        FDSFWFVQQWPP VC   K+ S        FTIHGLWP+  GTS
Subjt:  FDSFWFVQQWPPEVCKSTKNTS--------FTIHGLWPRNRGTS

Arabidopsis top hitse value%identityAlignment
AT2G02990.1 ribonuclease 15.8e-0436.84Show/hide
Query:  LLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKN----------TSFTIHGLWP
        LL+    ++   ++S  FD F+FVQQWP   C + K             F IHGLWP
Subjt:  LLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKN----------TSFTIHGLWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACACCAAAAACCCAAATTCTTCTCATCTTTGCTTTTATTATTTGGTTCCTCGTTGCTAACTCACACACTTTTGACAGCTTTTGGTTTGTTCAACAATGGCCACCCGAAGT
TTGCAAATCGACCAAGAATACATCTTTTACAATCCATGGTTTGTGGCCTCGAAATAGGGGGACCTCA
mRNA sequenceShow/hide mRNA sequence
ACACCAAAAACCCAAATTCTTCTCATCTTTGCTTTTATTATTTGGTTCCTCGTTGCTAACTCACACACTTTTGACAGCTTTTGGTTTGTTCAACAATGGCCACCCGAAGT
TTGCAAATCGACCAAGAATACATCTTTTACAATCCATGGTTTGTGGCCTCGAAATAGGGGGACCTCA
Protein sequenceShow/hide protein sequence
TPKTQILLIFAFIIWFLVANSHTFDSFWFVQQWPPEVCKSTKNTSFTIHGLWPRNRGTS