CuGenDBv2

Gene ID	MC06g0600
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Epidermal patterning factor-like protein
Genome location	MC06:4921726..4921989
RNA-Seq Expression	MC06g0600
Synteny	MC06g0600
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022145029.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Momordica charantia]

2.38e-60

100

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

XP_022933440.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X1 [Cucurbita moschata]

3.26e-37

70.45

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Query:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

XP_022933441.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata]

8.04e-37

71.26

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

XP_023531006.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita pepo subsp. pepo]

1.54e-36

70.45

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Query:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

XP_023531007.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo]

3.80e-36

71.26

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CU06 Epidermal patterning factor-like protein

1.15e-60

100

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

A0A6J1EZ19 Epidermal patterning factor-like protein

3.89e-37

71.26

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Query:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  SGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

A0A6J1F4W6 Epidermal patterning factor-like protein

1.58e-37

70.45

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Query:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +SG   SK+KEL IGSRPP+CFNKCLNC+PCVAALVISQRHK  GD  N    V    +NLEA ++P+DD+YYLLSWKCKCKDKYFQP
Subjt:  LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

A0A6J1HB97 Epidermal patterning factor-like protein

1.71e-33

69.51

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Query:  SKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        SK+KELVIGSRPP+CFNKCLNCRPCVAALVISQRHK   +    S    +P         PRDD+YYLLSWKCKCKDKYFQP
Subjt:  SKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

A0A6J1JFP8 Epidermal patterning factor-like protein

1.21e-33

72.29

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Query:  SKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATR-LPRDDSYYLLSWKCKCKDKYFQP
        S++KELVIGSRPP+CFNKCLNCRPCVAALVISQRHK    G++ +A      +NLEA    PRDD+YYLLSWKCKCKDKYFQP
Subjt:  SKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATR-LPRDDSYYLLSWKCKCKDKYFQP

SwissProt top hits

e value

%identity

Alignment

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 8

1.4e-06

32.5

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Query:  KELVIGSRPPQCFNKCLNCRPCVAALV-ISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        KE V+GS PP C  KC NC+PC+  L  I   H +  D                       + YY + W C+C+D+ F+P
Subjt:  KELVIGSRPPQCFNKCLNCRPCVAALV-ISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 1

1.4e-06

32.1

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Query:  EKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLN-YSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        E +  +GS PP C N+C NC PC+A  V +   +     +N +S     P ++L  T L +  +Y  + WKC C   ++ P
Subjt:  EKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLN-YSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 2

2.0e-05

32.47

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Query:  VIGSRPPQCFN-KCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +IGSRPP+C   +C +C  C A  V +    +    L  S++      +L+ TR     +Y  +SWKCKC +  + P
Subjt:  VIGSRPPQCFN-KCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

Arabidopsis top hits

e value

%identity

Alignment

AT1G80133.1 unknown protein

9.8e-08

32.5

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Query:  KELVIGSRPPQCFNKCLNCRPCVAALV-ISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        KE V+GS PP C  KC NC+PC+  L  I   H +  D                       + YY + W C+C+D+ F+P
Subjt:  KELVIGSRPPQCFNKCLNCRPCVAALV-ISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

AT4G37810.1 unknown protein

1.4e-06

32.47

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Query:  VIGSRPPQCFN-KCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        +IGSRPP+C   +C +C  C A  V +    +    L  S++      +L+ TR     +Y  +SWKCKC +  + P
Subjt:  VIGSRPPQCFN-KCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

AT5G10310.1 unknown protein

9.8e-08

32.1

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Query:  EKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLN-YSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP
        E +  +GS PP C N+C NC PC+A  V +   +     +N +S     P ++L  T L +  +Y  + WKC C   ++ P
Subjt:  EKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLN-YSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

Sequences

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CDS sequence

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CTCTCAGGTGTGGGTTATTCAAAGGAGAAGGAATTGGTAATTGGGTCAAGGCCACCACAGTGCTTCAACAAGTGCCTGAATTGCAGGCCATGTGTTGCTGCTTTGGTCAT
CTCTCAGCGCCATAAGGAATCAGGTGATGGTCTTAATTATAGTGCTGCTGTTCCTATTCCTAATGCTAATTTGGAAGCCACTAGACTCCCCAGGGATGATTCCTATTATC
TCCTCTCATGGAAATGCAAATGTAAAGATAAGTACTTTCAGCCT

mRNA sequence

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Protein sequence

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LSGVGYSKEKELVIGSRPPQCFNKCLNCRPCVAALVISQRHKESGDGLNYSAAVPIPNANLEATRLPRDDSYYLLSWKCKCKDKYFQP

MC06g0600 (gene) of Bitter gourd (Dali-11) v1 genome