CuGenDBv2

Gene ID	MC06g0617
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	MC06:5048857..5059667
RNA-Seq Expression	MC06g0617
Synteny	MC06g0617
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7023531.1 Mediator of RNA polymerase II transcription subunit 17 [Cucurbita argyrosperma subsp. argyrosperma]

0.0

91.23

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAF
        FRPSSSTIRVD DSSGMLAI+LP NSCHS+RFGFLSGCN+ENPLERGKNESTNSSNQS I+ EEFTNDDEYIKETNSLLR+VHHAIFSEQVFDLVNREAF
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAF

Query:  NPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSND
        NPSLGINVTGIRENYLQLSIDQ TSVFISLVP+ +S Q V+ ANT ILDNTNLPFDSLDGIELPDRSD LEKKLRNPN+  FEIYLQQIFHELVFVKSND
Subjt:  NPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSND

Query:  RPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQF
        +PIS+LSRQ  QPSNDGSGLLGHFCLSLAHRIFAN VLMELENVVWKVP +QLISHPTWNSRKSSWTFFMEVP+S +HP  IQARTSD HQMK+VTKSQF
Subjt:  RPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQF

Query:  QTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDA
        QTKVVVNDDCITIEGEGAP+VVGL KGNSK++YSMNRYGCDLADLPVIILLQVA QIILWLH EALTWGIK +RDFLSLSFELEQGETLRLVAHVDPEDA
Subjt:  QTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDA

Query:  QGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        QGCLSWWLVMDD L EDRK NFDISDVVPEYRKFLG+LSLEVL STLMDLVSLCSGFG  L
Subjt:  QGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

XP_022145057.1 mediator of RNA polymerase II transcription subunit 17 [Momordica charantia]

0.0

100

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAF
        FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAF
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAF

Query:  NPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSND
        NPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSND
Subjt:  NPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSND

Query:  RPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQF
        RPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQF
Subjt:  RPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQF

Query:  QTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDA
        QTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDA
Subjt:  QTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDA

Query:  QGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        QGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
Subjt:  QGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

XP_023005226.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0

91.4

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLP+KRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA-PAPANEGFTIDLFDNSSCDPSS
        DA+TVAGMTRPK LPNE LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA PAPANEGFTIDLFD+SSCDPSS
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA-PAPANEGFTIDLFDNSSCDPSS

Query:  VFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRV+HD SGML INLP NSCHS+RFGFLSGCNVEN LE G NESTNS+NQSS K E EFTNDD YIKETNSLLRE HHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQ TSVFISLVPSS+SCQ+VDGANT+ILDNTNLPFDSLDGIELPDR D LEKKLRNPNHI FEIYLQQIFH LVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDR ISA SRQ +Q SNDGSGLLGHFCLSLAHRIFAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVP SI+HP  IQARTSD HQM NVTKS
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVND+CITIEGEGAPNVV L K NSK+IYSMNRYGCDLADLPVIILLQVA QI+LWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        DAQGCLSWWLVMDD LM+DRKLNFDISDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGFG  L
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

XP_023516123.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subsp. pepo]

0.0

91.39

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA
        FRPSSSTIRVD DSSGMLAI+LP NSCHS+RFGFLSGCN+ENPLERGKNESTNSSNQS I+ E EFTNDDEYIKETNSLLR+VHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQ TSVFISLVP+ +SCQ V+ AN  ILDNTNLPFDSLDGIELPDRSD LEKKLRNPN+  FEIYLQQIFHELVF++SN
Subjt:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN

Query:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ
        D+PIS+LSRQ  QPSNDGSGLLGHFCLSLAHRIFAN VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVP+S +HP  IQARTSD HQMK+VTKSQ
Subjt:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAP+VVGL KGNSK++YSMNRYGCDLADLPVIILLQVA QIILWLH EALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        AQGCLSWWLVMDD LMEDRK NFDISDVVPEYRKFLG+LSLEVL STLMDLVSLCSGFGG L
Subjt:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

XP_038889914.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida]

0.0

91.54

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVSLDKLPVKRLEAIEE GLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA
        FRPSSSTIRV+HDSSGMLAINLP NSCHS+RFGFLSGCNVENPLERGKNESTNSSNQSSI  E EFTNDDEYIKETNSLLR+VHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQ TSV ISLVPS +SCQ V+GANT ILDN NLPFDSLDGIELPDRSD  EKKLRNPNHI FEIYLQQIFHELVFV+SN
Subjt:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN

Query:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ
        DRP SALSRQ  Q +NDGSGLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQA TSD HQM N+TKSQ
Subjt:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAPNVVGL  GNSK+I+SMNRYGCDLADLPVIILLQVA QIILWLH EALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Subjt:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
         QGCLSWWLVMDD LMED+KL+FD SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSG G  L
Subjt:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0

90.79

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLP+KRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP NSCHS+RFGFLSGCNVENPLE  KN++TN SNQ+S+K E EFTNDDEYIKETNSLLR+VHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQ TSVFISLVPS +SCQ V+GAN++ILDN NLPFDSLDGIELPDRSD LEKKLRNPNHI FEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN

Query:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ
        DRPIS+LSRQ  Q SNDGSGLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQARTSD +QM NVTK+Q
Subjt:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAPNVVGL  GNSK+IY  NRY CDLADLPVIILLQVA QIILWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
         QGCLSWWLVMDD LMEDRKLNF+ SDVVPEYRKFLG LSLEVLHSTLMDLVSLCSG GG L
Subjt:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0

90.79

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLP+KRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDHDSSGMLAINLP NSCHS+RFGFLSGCNVENPLE  KN++TN SNQ+S+K E EFTNDDEYIKETNSLLR+VHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQ TSVFISLVPS +SCQ V+GAN++ILDN NLPFDSLDGIELPDRSD LEKKLRNPNHI FEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN

Query:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ
        DRPIS+LSRQ  Q SNDGSGLLGHFCLSLAHR+FAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HPN IQARTSD +QM NVTK+Q
Subjt:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAPNVVGL  GNSK+IY  NRY CDLADLPVIILLQVA QIILWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
         QGCLSWWLVMDD LMEDRKLNF+ SDVVPEYRKFLG LSLEVLHSTLMDLVSLCSG GG L
Subjt:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

A0A6J1CVE8 Mediator of RNA polymerase II transcription subunit 17

0.0

100

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAF
        FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAF
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAF

Query:  NPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSND
        NPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSND
Subjt:  NPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSND

Query:  RPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQF
        RPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQF
Subjt:  RPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQF

Query:  QTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDA
        QTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDA
Subjt:  QTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDA

Query:  QGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        QGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
Subjt:  QGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

A0A6J1JAW7 Mediator of RNA polymerase II transcription subunit 17

0.0

90.94

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA
        FRPSSSTIRVD DSSGMLAI+LP N+CHS+ FGFLSGCN+ENPLERGKNESTNSSNQS I+ E EFTNDDEYIKETNSLLR+VHHAIFSEQVFD VNREA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQ TSVFISLVP+ +SCQ V+ ANT ILDNTNLPFDSLDGIELPDRSD LEKKLRNPN+  FEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSN

Query:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ
        D+PIS+LSRQ  QPSNDGSGLLGHFCLSLAHRIFAN VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVP+S +HP  IQARTSD H+M +VTKSQ
Subjt:  DRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAP+VVGL KGNSK++YSMNRYGCDLADLPVIILLQVA QIILWLH EALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        AQGCLSWWLVMDD LMEDRK NF+ISDVVPEYRKFLG+LSLEVL STLMDLVSLCSGFGG L
Subjt:  AQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

A0A6J1KUD0 mediator of RNA polymerase II transcription subunit 17-like

0.0

91.4

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Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLP+KRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA-PAPANEGFTIDLFDNSSCDPSS
        DA+TVAGMTRPK LPNE LSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA PAPANEGFTIDLFD+SSCDPSS
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA-PAPANEGFTIDLFDNSSCDPSS

Query:  VFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRV+HD SGML INLP NSCHS+RFGFLSGCNVEN LE G NESTNS+NQSS K E EFTNDD YIKETNSLLRE HHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQ TSVFISLVPSS+SCQ+VDGANT+ILDNTNLPFDSLDGIELPDR D LEKKLRNPNHI FEIYLQQIFH LVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKS

Query:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS
        NDR ISA SRQ +Q SNDGSGLLGHFCLSLAHRIFAN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVP SI+HP  IQARTSD HQM NVTKS
Subjt:  NDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKS

Query:  QFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVND+CITIEGEGAPNVV L K NSK+IYSMNRYGCDLADLPVIILLQVA QI+LWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL
        DAQGCLSWWLVMDD LM+DRKLNFDISDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGFG  L
Subjt:  DAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

2.9e-210

58.57

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFP DV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKN-ESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVN
        S FRPS+ STIRVDHDS+GMLAIN+P +S +S+RFG++    + N  E  ++ +ST   +      +   +DD+Y+KET+SLLREVH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKN-ESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVN

Query:  REAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFV
        REAFN  +G N++G+REN++++SI Q  S+F+SL PS K+  I      K  ++  L  +S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F 
Subjt:  REAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFV

Query:  KSNDRPISALSRQLSQPSND-GSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNV
        K+ D+  S   R  +Q   D  SGLL HFCLSL HRIF+N VL+ LE+VV KVP L LISHPTWNSR SSWT FM VP SI+     + ++ D    K  
Subjt:  KSNDRPISALSRQLSQPSND-GSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNV

Query:  TKSQFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHV
         K+QF+TKVVV DDCI++E E  PNVVGL K +S N++S+N+Y CD+ADLPV+IL QVA QI+ WL  EA T G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKSQFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLC
        +PEDA+GC+SWWLVM++   E+R       + V E RK LG+LSL+VL+S LMDL++LC
Subjt:  DPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLC

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

2.1e-211

58.57

Show/hide

Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFP DV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKN-ESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVN
        S FRPS+ STIRVDHDS+GMLAIN+P +S +S+RFG++    + N  E  ++ +ST   +      +   +DD+Y+KET+SLLREVH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKN-ESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVN

Query:  REAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFV
        REAFN  +G N++G+REN++++SI Q  S+F+SL PS K+  I      K  ++  L  +S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F 
Subjt:  REAFNPSLGINVTGIRENYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFV

Query:  KSNDRPISALSRQLSQPSND-GSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNV
        K+ D+  S   R  +Q   D  SGLL HFCLSL HRIF+N VL+ LE+VV KVP L LISHPTWNSR SSWT FM VP SI+     + ++ D    K  
Subjt:  KSNDRPISALSRQLSQPSND-GSGLLGHFCLSLAHRIFANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNV

Query:  TKSQFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHV
         K+QF+TKVVV DDCI++E E  PNVVGL K +S N++S+N+Y CD+ADLPV+IL QVA QI+ WL  EA T G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKSQFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLC
        +PEDA+GC+SWWLVM++   E+R       + V E RK LG+LSL+VL+S LMDL++LC
Subjt:  DPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGGAGACATGAAAGTTTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAAAACGGCCTCGAACGATTCCCATTAGATGTAGGTTATGAAGAGAA
ACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATTGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACGCCGTGGCCATGGC
AGAATATGATAGAAAACTTGCAGCTGGCTCATCAAGAACTCTCTGTTATCATAGACCTCATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCTGGGATGACTAGG
CCGAAACCATTACCAAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTGCAATGCTTTCGACATCTTGGCAAATATTTCAAGCAGTCAGCTAAAGGTTT
GGAACGCCAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTCTAATTAGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGTGTGGCTGCCCCAGCTCCTGCAAATGAAG
GCTTTACCATTGATTTATTTGACAATTCATCATGTGATCCTTCCTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTCGATCATGATTCATCTGGAATGCTGGCTATT
AATTTACCTTCAAATTCTTGCCACTCCATCCGTTTTGGATTTCTCAGTGGATGTAATGTGGAGAATCCTCTGGAACGTGGTAAAAATGAGTCCACAAATTCATCCAATCA
GTCTTCAATCAAAGGTGAGGAGTTTACAAATGACGATGAATACATTAAGGAAACAAACTCACTTCTCCGTGAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATT
TGGTGAATCGCGAAGCATTCAATCCATCCTTGGGTATCAATGTCACTGGAATACGAGAAAATTACTTGCAATTAAGTATAGATCAGAGTACCTCGGTCTTCATCTCTCTC
GTGCCATCTAGTAAAAGTTGCCAAATAGTTGATGGTGCCAATACCAAGATTTTGGATAATACAAATTTACCTTTTGATTCACTTGATGGGATTGAATTACCAGATAGAAG
TGACTCCCTTGAAAAGAAGTTGCGGAATCCTAATCATATAAATTTTGAAATATATCTGCAGCAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCATTT
CTGCATTAAGCCGCCAATTAAGTCAACCTTCTAATGATGGTTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTTGCCCACAGGATATTTGCAAACAGTGTTCTTATGGAG
CTCGAAAATGTGGTCTGGAAGGTCCCATGTCTTCAATTAATTTCTCATCCCACTTGGAATTCTCGAAAATCTTCATGGACCTTCTTCATGGAAGTTCCCCGGTCCATTGT
TCATCCTAATGGCATCCAAGCTCGTACATCAGACCGTCATCAGATGAAGAATGTAACCAAATCACAATTTCAGACTAAAGTGGTGGTAAATGATGATTGTATCACAATTG
AAGGGGAAGGTGCTCCTAATGTCGTTGGCCTGTGCAAGGGAAATTCCAAGAATATCTACTCAATGAACAGATATGGCTGCGACTTGGCTGATCTTCCCGTGATAATTCTG
TTGCAGGTTGCTGGCCAAATTATTCTTTGGCTTCATGGGGAAGCTCTAACCTGGGGAATAAAGGCAAACCGCGACTTCCTAAGTCTATCCTTTGAGTTAGAACAGGGCGA
AACACTCCGTCTTGTAGCCCATGTCGACCCAGAAGATGCTCAAGGCTGCCTTTCCTGGTGGTTGGTCATGGACGATGACCTGATGGAGGACAGGAAACTTAATTTTGACA
TTTCAGATGTTGTACCTGAATACAGGAAGTTCTTGGGGTATTTATCACTGGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGCTTGTGCAGTGGATTTGGGGGTGGC
CTATGA

mRNA sequence

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GAAAAAACCCAGTGAACCAAGATGTTCTTTCAAAATATTCAGGGAGAAATCGGTCATTTCAGTATTCCAGTCGTCGTTGAGCTCTCTGTCAGTGGATTCTCGTCCCGATC
CCGGACTTCTCTTCCGTTCTAGGGCTCGCTCCAAATCTTCCCTCCCGAAATTCCGGGGAAATATTAGGGGATATGGACGGAGACATGAAAGTTTCTCTCGACAAGCTTCC
CGTCAAGCGCTTGGAGGCCATAGAAGAAAACGGCCTCGAACGATTCCCATTAGATGTAGGTTATGAAGAGAAACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGG
CAATTGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACGCCGTGGCCATGGCAGAATATGATAGAAAACTTGCAGCTGGCTCATCAAGAA
CTCTCTGTTATCATAGACCTCATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCTGGGATGACTAGGCCGAAACCATTACCAAATGAAGTTTTATCAGATCTTGG
AGTGTCTGTAGCAACGAAACTGCAATGCTTTCGACATCTTGGCAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGCCAGGTTGCAAGGGAAGCAAGATTTTATGGTG
CTCTAATTAGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGTGTGGCTGCCCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCATGTGAT
CCTTCCTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTCGATCATGATTCATCTGGAATGCTGGCTATTAATTTACCTTCAAATTCTTGCCACTCCATCCGTTTTGG
ATTTCTCAGTGGATGTAATGTGGAGAATCCTCTGGAACGTGGTAAAAATGAGTCCACAAATTCATCCAATCAGTCTTCAATCAAAGGTGAGGAGTTTACAAATGACGATG
AATACATTAAGGAAACAAACTCACTTCTCCGTGAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGCGAAGCATTCAATCCATCCTTGGGTATC
AATGTCACTGGAATACGAGAAAATTACTTGCAATTAAGTATAGATCAGAGTACCTCGGTCTTCATCTCTCTCGTGCCATCTAGTAAAAGTTGCCAAATAGTTGATGGTGC
CAATACCAAGATTTTGGATAATACAAATTTACCTTTTGATTCACTTGATGGGATTGAATTACCAGATAGAAGTGACTCCCTTGAAAAGAAGTTGCGGAATCCTAATCATA
TAAATTTTGAAATATATCTGCAGCAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCATTTCTGCATTAAGCCGCCAATTAAGTCAACCTTCTAATGAT
GGTTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTTGCCCACAGGATATTTGCAAACAGTGTTCTTATGGAGCTCGAAAATGTGGTCTGGAAGGTCCCATGTCTTCAATT
AATTTCTCATCCCACTTGGAATTCTCGAAAATCTTCATGGACCTTCTTCATGGAAGTTCCCCGGTCCATTGTTCATCCTAATGGCATCCAAGCTCGTACATCAGACCGTC
ATCAGATGAAGAATGTAACCAAATCACAATTTCAGACTAAAGTGGTGGTAAATGATGATTGTATCACAATTGAAGGGGAAGGTGCTCCTAATGTCGTTGGCCTGTGCAAG
GGAAATTCCAAGAATATCTACTCAATGAACAGATATGGCTGCGACTTGGCTGATCTTCCCGTGATAATTCTGTTGCAGGTTGCTGGCCAAATTATTCTTTGGCTTCATGG
GGAAGCTCTAACCTGGGGAATAAAGGCAAACCGCGACTTCCTAAGTCTATCCTTTGAGTTAGAACAGGGCGAAACACTCCGTCTTGTAGCCCATGTCGACCCAGAAGATG
CTCAAGGCTGCCTTTCCTGGTGGTTGGTCATGGACGATGACCTGATGGAGGACAGGAAACTTAATTTTGACATTTCAGATGTTGTACCTGAATACAGGAAGTTCTTGGGG
TATTTATCACTGGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGCTTGTGCAGTGGATTTGGGGGTGGCCTATGACCATGCTTACTTTCCGGAATGTTCTTTGGAGG
TGGCCACATGACCTGGATGGCTGGAAGCTGACATCAGGAGGAAGAAACCATTTGGAAACGCTTCTCTTCTAATCTCTATCGTTGTCATCACCTCAACAAGAAGAAAGCAA
GCTTGCAGTGAAATAGCGAAAATCCCCTATTACCCTCCTGGTTTTCTTTTTGTTGCACCGGCTGCTCGGTTTCCCGCATTCAAGACTATAATTTACAAAACGGAAGGAAA
ATTGCATTGTGGGTATTGAAGCGTTCGCGAAGTTCAATTGTGGGTTATAAAGAATTCGAAGCCTTTGTGTTTGTTGGGGGTTGGAATTACGAAGAGCCCCGAGGTGGGTT
GTTTGCGAATATTCATTTCGAGGATCTCTGATTCTTTTCAGCGGCACCAATTCGATCTTTTTCCATGATCTTGTGTCAATCAATTTGTGAGTTCTTTGATTTGAAGTGAC
AGTTCTGTGGCATTTAATTTTGAATCTCGGAGGTTATGGGTGGAGTATCCGTGTGGTAATGCAGTAAAGTTTTCTGGGAAGCTATTTGGGAAATTGAAATTGGATAGATT
TCGGGTTAGGAGAGCTATTTGTGTTAATTCCCAGCTAGCTTTTCTGTTCTCCATGCCTTTTGCGTAGCTTTAATTTGTGTATCGCTATGTCGGGGGGAACACCCGTCGCG
GGTGGTTATATGAGGCAGAGGCATAGCCAGGGGTATGCTTCTAGTGGTGATGATATTGAGGATGATGCATGTTCGAGGTTTCAAACTATGGCGTTTCATTCTACAAAGAT
TCGGACGTGGATTGGAGTTATAGAGAATGTCCTTTGGCTTGCTTCTGCTGCTTTCATTGTATACTATGGTGATAGGCACTCCAATTTGATATATCTCTTGTGGCATGATG
ACCGAATAAGAAGACCTCCTTTTTACCTCGGGATGGTGGGGATCGGTTTGAATGTCGTCATCTTCATTTACACAAGTATGTCAGCTTGGAGCATTAGAAGGTTTGATGAA
AAATGGGAACTAGCAAGCTTATCAGTTTTACCAATTGTCACACTTCTCGGGCTTATCTCCTTTTTCTTGTTGTCATTTGCTGTCTGGCCAATATGGGGTTTCCTGACTAT
TCCTCTTCTGTTCACTTTGTTCATGGCATGCATGGTTGTATTTCCCAATATAATGATCGGGAAATTCAGGCATCAGAGTGATGTGCTCCGTACAGATTAAACATTTGCTT
GATCGAGGTGATGCATAGATGAAAAGATTGATTTTGAAGTACAGATGATTGGTTGGACTGGCTTGAGATAAAAGAAGATTCTGATGTGGGCAATTTACCATAAACCAACT
GCCTTCTCTTCAGTCAACTCAAATTCCGACCTTGCCAGAATGATGCACAGTAATGGTACATTTGGAATTCGTTATTTTGATACAACCACAACCGTAGCACCATTCTTCTA
TCGTTACATCTTCTGTTAGCAAAGGTCCATTTCCTTTGTTACGTAGTTTAGTTGCCTCATTTTTTCATTGGAAAGTAGGTGTGTGGCGTGCCCTATTATTCGTGTACGTG
ATTCATTCGATTTTAGCATCTTCTTTGGCTATAATTTGTTTATGTTTGGTAGGACTGTAAAGTTTTTTGGAACTACTGTTCAGTGAAGTTACTTGAATGAATGATCTCTT
GGGCA

Protein sequence

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MDGDMKVSLDKLPVKRLEAIEENGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTR
PKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAI
NLPSNSCHSIRFGFLSGCNVENPLERGKNESTNSSNQSSIKGEEFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQSTSVFISL
VPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKKLRNPNHINFEIYLQQIFHELVFVKSNDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIFANSVLME
LENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMKNVTKSQFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIIL
LQVAGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDDLMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGG
L

MC06g0617 (gene) of Bitter gourd (Dali-11) v1 genome