CuGenDBv2

Gene ID	MC06g0710
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	TF-B3 domain-containing protein
Genome location	MC06:5803432..5803836
RNA-Seq Expression	MC06g0710
Synteny	MC06g0710
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR003340 - B3 DNA binding domain IPR005508 - B3 domain-containing protein At2g31720-like IPR015300 - DNA-binding pseudobarrel domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]

3.15e-40

53.33

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Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        +PP+  I+++IG+CS  + K+LT +DV ++QGRLA+ KEFV + L PMFN    +E L  GI VTVY+ EGRE+ MTF++W SKLYVL K WK F   N 
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH
        LT     EF+TLWMFRH   H LCFAI+ G    H
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]

2.63e-41

56.92

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Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        +P +  I ++IG  S  +EKRLT SDV+E QGRL + KEFVT +L PMFN    +E+  EGI+VTVYN EGR++ M FK+WASKLYVL KGW  F K NN
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILG
        LT    G ++TLWMFRH  TH +CFA+  G
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILG

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.13e-42

56.92

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Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        +P +  I ++IG  S  +EKRLT SDV+E QGRL + KEFVT +L PMFN    +E+  EGI+VTVYN EGR++ M FK+WASKLYVL KGW  F K NN
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILG
        LT    G ++TLWMFRH  TH +CFA+  G
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILG

XP_022145065.1 putative B3 domain-containing protein At4g03170 [Momordica charantia]

2.18e-95

100

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Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH
        LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]

7.21e-41

55.38

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Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        +PP+  I+++IG+CS  + K+L  +DV E+QGRLA+ KEFVT+ L PMFN     ENL+ GI VTVY+ EGRE+ M FK W SKLYVL K W  F K+NN
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILG
        LT    GEF+++WMFRH     LCFAI+ G
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7L0 TF-B3 domain-containing protein

1.69e-39

55.04

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Query:  PPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNL
        PP+  I+++IG+CS  + K+LT +DV + QGRLA+ KEFV   L PMFN   ++E+L +GI V VY+ EGRE+ M FK+WASKLYVL K WK F K N+L
Subjt:  PPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNL

Query:  THAHAGEFLTLWMFRHRRTHGLCFAIILG
        T    GEF+++WMFRH  T  LCFAI+ G
Subjt:  THAHAGEFLTLWMFRHRRTHGLCFAIILG

A0A0A0LC65 TF-B3 domain-containing protein

3.85e-40

56.45

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Query:  IRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHA
        I+++IG+CS  + K+L  +DV E+QGRLA+ KEFVT+ L PMFN     ENL+ GI VTVY+ EGRE+ M FK W SKLYVL K W  F K+NNLT    
Subjt:  IRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHA

Query:  GEFLTLWMFRHRRTHGLCFAIILG
        GEF+++WMFRH     LCFAI+ G
Subjt:  GEFLTLWMFRHRRTHGLCFAIILG

A0A2P6P5L3 Putative transcription factor B3-Domain family

5.54e-34

49.61

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Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        +PPVP +R  I  CS+ +EK+LT SDV + Q RLA+ KE V K L P+ N   ENE+LR GI+VT Y+ +G+E+ M FKIW  K++VL +GWK FC  + 
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIIL
        L      +F+T+WMFR+  T  LCF I L
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIIL

A0A5D3BAS8 Putative B3 domain-containing protein

1.52e-40

53.33

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Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        +PP+  I+++IG+CS  + K+LT +DV ++QGRLA+ KEFV + L PMFN    +E L  GI VTVY+ EGRE+ MTF++W SKLYVL K WK F   N 
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH
        LT     EF+TLWMFRH   H LCFAI+ G    H
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH

A0A6J1CTE7 putative B3 domain-containing protein At4g03170

1.06e-95

100

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Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH
        LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH

SwissProt top hits

e value

%identity

Alignment

Q9ZR14 Putative B3 domain-containing protein At4g03170

6.1e-14

40.35

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Query:  SRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIW-ASKLYVLMKGWKPFCKANNLTHAHAGEFLTLW
        SR  +K+L  SDV + Q  L + KE V + + P     +++EN  +GI+V+VY  +G+   M FK+W   K  VL  GWK F +   L  +   +F+T+W
Subjt:  SRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIW-ASKLYVLMKGWKPFCKANNLTHAHAGEFLTLW

Query:  MFRHRRTHGLCFAI
        MFRH +T  LCFAI
Subjt:  MFRHRRTHGLCFAI

Q9ZR15 Putative B3 domain-containing protein At4g03160

2.3e-13

41.59

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Query:  RAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENL-REGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWM
        R   ++L  SDV + Q RL +GKE V K    M +   + E L  +G+ V+VY   G    M  KIW     VL  GWK F K+  L   H  +FLT+WM
Subjt:  RAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENL-REGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWM

Query:  FRHRRTHGLCFAI
        FRH++T  +CFAI
Subjt:  FRHRRTHGLCFAI

Arabidopsis top hits

e value

%identity

Alignment

AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)

1.7e-14

41.59

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Query:  RAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENL-REGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWM
        R   ++L  SDV + Q RL +GKE V K    M +   + E L  +G+ V+VY   G    M  KIW     VL  GWK F K+  L   H  +FLT+WM
Subjt:  RAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENL-REGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWM

Query:  FRHRRTHGLCFAI
        FRH++T  +CFAI
Subjt:  FRHRRTHGLCFAI

AT4G03170.1 AP2/B3-like transcriptional factor family protein

4.4e-15

40.35

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Query:  SRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIW-ASKLYVLMKGWKPFCKANNLTHAHAGEFLTLW
        SR  +K+L  SDV + Q  L + KE V + + P     +++EN  +GI+V+VY  +G+   M FK+W   K  VL  GWK F +   L  +   +F+T+W
Subjt:  SRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIW-ASKLYVLMKGWKPFCKANNLTHAHAGEFLTLW

Query:  MFRHRRTHGLCFAI
        MFRH +T  LCFAI
Subjt:  MFRHRRTHGLCFAI

Sequences

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CDS sequence

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ATGCCACCGGTGCCGGCGATCAGGGACGTGATCGGGCAGTGCAGCCGGGCGTACGAGAAGAGGCTGACGGTAAGCGACGTGGCGGAGGCGCAAGGGCGGCTGGCGATTGG
GAAGGAATTCGTGACCAAATATTTGGCTCCAATGTTTAACAACAAGGATGAGAATGAGAATCTGAGAGAGGGAATTGAAGTGACGGTTTATAACAGAGAAGGGAGAGAAT
TCGGTATGACGTTTAAGATTTGGGCTTCAAAATTGTACGTGCTCATGAAAGGGTGGAAGCCGTTCTGCAAAGCCAATAATTTGACGCACGCCCACGCCGGAGAGTTCCTC
ACTTTATGGATGTTTCGCCATCGTCGCACCCACGGCCTCTGTTTTGCCATTATTCTGGGAACACCCATGAACCAC

mRNA sequence

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Protein sequence

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MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFL
TLWMFRHRRTHGLCFAIILGTPMNH

MC06g0710 (gene) of Bitter gourd (Dali-11) v1 genome