; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0790 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0790
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S16
Genome locationMC06:6596605..6599196
RNA-Seq ExpressionMC06g0790
SyntenyMC06g0790
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000307 - Ribosomal protein S16
IPR023803 - Ribosomal protein S16 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023670.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]7.63e-8594.57Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEP+QRILFR+GVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS
        R VDPLSGR V+PEKPT+DSSSKDGNADS
Subjt:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS

XP_022147743.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial [Momordica charantia]1.00e-89100Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS
        RPVDPLSGRFVTPEKPTDDSSSKDGNADS
Subjt:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS

XP_022960937.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial-like [Cucurbita moschata]4.42e-8493.8Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEP+QRILFR+GVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS
        R VDPLSGR V+PEKPT+DSS KDGNADS
Subjt:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS

XP_023516386.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo]4.60e-8696.12Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFR+GVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS
        R VDPLSGR V+PEKPTDDSSSKDGNADS
Subjt:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS

XP_038880699.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial isoform X2 [Benincasa hispida]3.78e-8595.35Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFRAGVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS
        R VDPLSGRFVTPEKPTD SS KDG+ADS
Subjt:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS

TrEMBL top hitse value%identityAlignment
A0A5D3CDW9 30S ribosomal protein S161.01e-8089.23Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLE+LGYYNPLPGQDGGKRMG+NFERVKYWLSVGAQPS+P+QRILFRAG+LPPPPMVAM RKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEK-PTDDSSSKDGNADS
        RPVDPLSGRFVTPEK PTD S+ + G+ADS
Subjt:  RPVDPLSGRFVTPEK-PTDDSSSKDGNADS

A0A6J1D251 30S ribosomal protein S16-2, chloroplastic/mitochondrial4.85e-90100Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS
        RPVDPLSGRFVTPEKPTDDSSSKDGNADS
Subjt:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS

A0A6J1F6D0 30S ribosomal protein S16-2, chloroplastic/mitochondrial-like2.21e-8494.62Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYY+PLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFRAGVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDS-SSKDGNADS
        RPVDPLSGRF TP+K TDDS SSKDGNADS
Subjt:  RPVDPLSGRFVTPEKPTDDS-SSKDGNADS

A0A6J1H8S5 30S ribosomal protein S16-2, chloroplastic/mitochondrial-like2.14e-8493.8Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEP+QRILFR+GVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS
        R VDPLSGR V+PEKPT+DSS KDGNADS
Subjt:  RPVDPLSGRFVTPEKPTDDSSSKDGNADS

A0A6J1HXD7 30S ribosomal protein S16-2, chloroplastic/mitochondrial-like2.21e-8494.62Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFRAGVLPPPPMVAMARKGGPRDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPTDDS-SSKDGNADS
        RPVDPLSGRF TP+K TDDS SSKDG+ADS
Subjt:  RPVDPLSGRFVTPEKPTDDS-SSKDGNADS

SwissProt top hitse value%identityAlignment
A5V9P7 30S ribosomal protein S162.7e-1953.66Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGV
        M V +RL+R G K +P+YR++ AD+RSPRDG  +E +G YNPL  +D  KR+ L+ +R K+WLSVGAQP++ V R L  AGV
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGV

O65686 30S ribosomal protein S16-1, chloroplastic5.3e-3152.68Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        M V++RL+R GCK++PFYRV+ AD +S RDGK +EVLG+Y+PL G++   R+ L F+R+KYWLSVGAQP++ V+ +LFRAG++PP PMV +  K G + T
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  -RPVDPLSGRFV
         + V P++G  +
Subjt:  -RPVDPLSGRFV

Q16AN8 30S ribosomal protein S163.6e-1952.44Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGV
        M +++RL+R G K +PFYR++AADSR PRDG+ +E LG YNPL  +D  +R+ ++ ERV+YWL  GAQP++ V R+L  AG+
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGV

Q5LNF2 30S ribosomal protein S162.1e-1953.01Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVL
        M +++RL+R G K +PFYR++AADSR PRDG+ +E LG YNPL  +D  +R+ ++ ERV+YWLS GAQ ++ V R+L  AGV+
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVL

Q9LTS6 30S ribosomal protein S16-2, chloroplastic/mitochondrial3.4e-5475Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL F+R+KYWLSVGAQPS+PVQR+LFR+G+LPPPPMVAM RKGG RDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPT---DDSSSKDGNADS
        RPVDP++GR+V  E  T   +D+  K+ + ++
Subjt:  RPVDPLSGRFVTPEKPT---DDSSSKDGNADS

Arabidopsis top hitse value%identityAlignment
AT4G34620.1 small subunit ribosomal protein 163.8e-3252.68Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        M V++RL+R GCK++PFYRV+ AD +S RDGK +EVLG+Y+PL G++   R+ L F+R+KYWLSVGAQP++ V+ +LFRAG++PP PMV +  K G + T
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  -RPVDPLSGRFV
         + V P++G  +
Subjt:  -RPVDPLSGRFV

AT5G56940.1 Ribosomal protein S16 family protein2.4e-5575Show/hide
Query:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT
        MVVR+RLSRFGCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL F+R+KYWLSVGAQPS+PVQR+LFR+G+LPPPPMVAM RKGG RDT
Subjt:  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDT

Query:  RPVDPLSGRFVTPEKPT---DDSSSKDGNADS
        RPVDP++GR+V  E  T   +D+  K+ + ++
Subjt:  RPVDPLSGRFVTPEKPT---DDSSSKDGNADS

ATCG00050.1 ribosomal protein S162.2e-0835.8Show/hide
Query:  VVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGV
        +V+LRL R G K +  YR++A D R  R+G+ L  +G+Y+P+  Q       LN   +  +L  GAQP+     I  +AG+
Subjt:  VVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTGAGGCTTCGATTGTCGAGGTTTGGCTGCAAGAACAAGCCATTTTACCGGGTAATGGCTGCCGATAGCCGATCTCCAAGGGACGGCAAGCATCTCGAGGTTCT
AGGTTACTATAATCCCCTGCCAGGTCAAGATGGCGGTAAACGAATGGGTCTTAATTTTGAAAGGGTGAAGTATTGGCTTTCAGTTGGAGCTCAGCCCTCAGAACCTGTGC
AGCGTATTCTCTTTAGAGCAGGGGTACTTCCACCACCCCCAATGGTCGCAATGGCTCGTAAAGGTGGACCACGTGATACTCGACCCGTCGATCCTCTGAGTGGACGCTTT
GTGACTCCAGAGAAGCCAACTGATGATTCCAGTAGCAAAGATGGCAACGCCGATTCATAA
mRNA sequenceShow/hide mRNA sequence
GGGCCGTTTAATATTGGGCCTAAACCCGGTTCGGTTCATTAGAGATCCGAATGTGAAAATGATAGGGAACCCGGAGCCCTAGCGGAGGCGCGACTTCTGTTCTCTAATCC
GGTGTCTTTTTTTCCAGTTTGGCGGATATCCAAGTTTTTTGCAGGGTTTTACGAGCTCGAAAATGGTGGTGAGGCTTCGATTGTCGAGGTTTGGCTGCAAGAACAAGCCA
TTTTACCGGGTAATGGCTGCCGATAGCCGATCTCCAAGGGACGGCAAGCATCTCGAGGTTCTAGGTTACTATAATCCCCTGCCAGGTCAAGATGGCGGTAAACGAATGGG
TCTTAATTTTGAAAGGGTGAAGTATTGGCTTTCAGTTGGAGCTCAGCCCTCAGAACCTGTGCAGCGTATTCTCTTTAGAGCAGGGGTACTTCCACCACCCCCAATGGTCG
CAATGGCTCGTAAAGGTGGACCACGTGATACTCGACCCGTCGATCCTCTGAGTGGACGCTTTGTGACTCCAGAGAAGCCAACTGATGATTCCAGTAGCAAAGATGGCAAC
GCCGATTCATAAAACATTTTTTAAGAAATATGTCTGGAATCTTTTAAGTGAAGTTTCCAACTTTGTCCTGTTCTTCAGGTAATAGAGTTCAATAAATCAGTCCATTTACT
TCGATTGTAAGATGAGTGGTTTTTGATGGGGAATAGGAGAGGTAAAGTAGTTTCAGTTCATTGTGGATCATTAAAGATGGAGTCTGTAGATATCATCAATAGCCAATCCC
CAGTGCCAAGTATATGGCTGTTGGACTGAGCTACTTAAGTTAAGGTTAGCCATTACTTTTGAGAAAACATTCTCGTATTGTCAAATTCAACA
Protein sequenceShow/hide protein sequence
MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMVAMARKGGPRDTRPVDPLSGRF
VTPEKPTDDSSSKDGNADS