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MC06g0811 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0811
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPhotosystem II PsbX
Genome locationMC06:6762437..6762790
RNA-Seq ExpressionMC06g0811
SyntenyMC06g0811
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009518 - Photosystem II PsbX


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450907.1 PREDICTED: uncharacterized protein LOC103492356 [Cucumis melo]1.21e-4577.24Show/hide
Query:  MASTSALSMALPLTNKT----LSTAFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG
        MASTSA+SMALP T+ T     + AFFNPLPS +S    AAAP SNGR++ VRSSLKEKAV G+TAAAL ASMVIPEVAEAAG G+SPSLKNFLLSIAAG
Subjt:  MASTSALSMALPLTNKT----LSTAFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG

Query:  GAVVVAIVGAVIGVSNFDPVKRS
        GAVVVAI GAVIGV+NFDPVKRS
Subjt:  GAVVVAIVGAVIGVSNFDPVKRS

XP_022960741.1 uncharacterized protein LOC111461452 [Cucurbita moschata]8.46e-4980.8Show/hide
Query:  MASTSALSMALPLTNKT---LST-AFFNPLP----SRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSI
        MASTS +S+ALPLTN T   LS  AFFNPLP    SRS  A AAAP S+GRL+ VRSSLKEKA+TGLTAAALTASMVIPEVAEAAGPG+SPSLKNFLLSI
Subjt:  MASTSALSMALPLTNKT---LST-AFFNPLP----SRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSI

Query:  AAGGAVVVAIVGAVIGVSNFDPVKR
        AAGG VVVAI+GAVIGVSNFDPVKR
Subjt:  AAGGAVVVAIVGAVIGVSNFDPVKR

XP_022987287.1 uncharacterized protein LOC111484883 [Cucurbita maxima]1.15e-4678.4Show/hide
Query:  MASTSALSMALPLT---NKTLST-AFFNPLP----SRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSI
        MASTS +S+ALPLT   +K LS  AFFNPLP    SR   A AAAP SNGRL+ VRSSLKEKA+TG++AAALTASMVIPEVAEAAGPG+SPSLKNFLLSI
Subjt:  MASTSALSMALPLT---NKTLST-AFFNPLP----SRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSI

Query:  AAGGAVVVAIVGAVIGVSNFDPVKR
        AAGG VVVAI+GAVIGVSNFDPVKR
Subjt:  AAGGAVVVAIVGAVIGVSNFDPVKR

XP_031735956.1 uncharacterized protein LOC116401689 [Cucumis sativus]3.48e-4576.42Show/hide
Query:  MASTSALSMALPLTNKTL----STAFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG
        MASTSALSMALP T+ T     + AFFNPLPS +S    A AP SNGR+L VRSS KEKAV G++AAALTASMVIPEVAEAAG G+SPSLKNFLLSIAAG
Subjt:  MASTSALSMALPLTNKTL----STAFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG

Query:  GAVVVAIVGAVIGVSNFDPVKRS
        G VVVAI+GAVIGV+NFDPVKRS
Subjt:  GAVVVAIVGAVIGVSNFDPVKRS

XP_038878912.1 uncharacterized protein LOC120071001 [Benincasa hispida]8.06e-5183.74Show/hide
Query:  MASTSALSMALPLT---NKTLST-AFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG
        MASTSALSMALPLT   +K LS  AFFNPLPS +S  A AAAPKSNGR++ VRSSLKEKAV G+TAAALTASMVIPEVAEAAGPG+SPSLKNFLLSIAAG
Subjt:  MASTSALSMALPLT---NKTLST-AFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG

Query:  GAVVVAIVGAVIGVSNFDPVKRS
        GAVVVAI+GAVIGV+NFDPVKRS
Subjt:  GAVVVAIVGAVIGVSNFDPVKRS

TrEMBL top hitse value%identityAlignment
A0A0A0LWL3 Uncharacterized protein1.68e-4576.42Show/hide
Query:  MASTSALSMALPLTNKTL----STAFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG
        MASTSALSMALP T+ T     + AFFNPLPS +S    A AP SNGR+L VRSS KEKAV G++AAALTASMVIPEVAEAAG G+SPSLKNFLLSIAAG
Subjt:  MASTSALSMALPLTNKTL----STAFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG

Query:  GAVVVAIVGAVIGVSNFDPVKRS
        G VVVAI+GAVIGV+NFDPVKRS
Subjt:  GAVVVAIVGAVIGVSNFDPVKRS

A0A1S3BRD2 uncharacterized protein LOC1034923565.88e-4677.24Show/hide
Query:  MASTSALSMALPLTNKT----LSTAFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG
        MASTSA+SMALP T+ T     + AFFNPLPS +S    AAAP SNGR++ VRSSLKEKAV G+TAAAL ASMVIPEVAEAAG G+SPSLKNFLLSIAAG
Subjt:  MASTSALSMALPLTNKT----LSTAFFNPLPS-RSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAG

Query:  GAVVVAIVGAVIGVSNFDPVKRS
        GAVVVAI GAVIGV+NFDPVKRS
Subjt:  GAVVVAIVGAVIGVSNFDPVKRS

A0A6J1H8G2 uncharacterized protein LOC1114614524.10e-4980.8Show/hide
Query:  MASTSALSMALPLTNKT---LST-AFFNPLP----SRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSI
        MASTS +S+ALPLTN T   LS  AFFNPLP    SRS  A AAAP S+GRL+ VRSSLKEKA+TGLTAAALTASMVIPEVAEAAGPG+SPSLKNFLLSI
Subjt:  MASTSALSMALPLTNKT---LST-AFFNPLP----SRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSI

Query:  AAGGAVVVAIVGAVIGVSNFDPVKR
        AAGG VVVAI+GAVIGVSNFDPVKR
Subjt:  AAGGAVVVAIVGAVIGVSNFDPVKR

A0A6J1HV97 uncharacterized protein LOC1114677552.38e-4478.51Show/hide
Query:  MASTSALSMALPLT---NKTLST-AFFNPLPSRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGG
        MAS  A+SMALPLT    K LS  AFFNPLPSRS  A  AAP    RL+VV SSLKEKAVTGLTAAAL+A+MVIPEVAEAAGPG+SPSLKNFLLSIAAGG
Subjt:  MASTSALSMALPLT---NKTLST-AFFNPLPSRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGG

Query:  AVVVAIVGAVIGVSNFDPVKR
         VV+AI+GAVIGVSNFDPVKR
Subjt:  AVVVAIVGAVIGVSNFDPVKR

A0A6J1J9Y5 uncharacterized protein LOC1114848835.55e-4778.4Show/hide
Query:  MASTSALSMALPLT---NKTLST-AFFNPLP----SRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSI
        MASTS +S+ALPLT   +K LS  AFFNPLP    SR   A AAAP SNGRL+ VRSSLKEKA+TG++AAALTASMVIPEVAEAAGPG+SPSLKNFLLSI
Subjt:  MASTSALSMALPLT---NKTLST-AFFNPLP----SRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSI

Query:  AAGGAVVVAIVGAVIGVSNFDPVKR
        AAGG VVVAI+GAVIGVSNFDPVKR
Subjt:  AAGGAVVVAIVGAVIGVSNFDPVKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G06520.1 photosystem II subunit X5.7e-2760.17Show/hide
Query:  MASTSALSMALPLTNKTLSTAFFNPLPSRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGGAVVV
        MASTSA+S+  PL N+T S+ F  PLP +  + A  A     + L V++   +KA+TG++AAALTASMVIPE+AEAAG GISPSLKNFLLSIA+GG V+ 
Subjt:  MASTSALSMALPLTNKTLSTAFFNPLPSRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGGAVVV

Query:  AIVGAVIGVSNFDPVKRS
         I+G V+GVSNFDPVKR+
Subjt:  AIVGAVIGVSNFDPVKRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAACTTCTGCACTTTCAATGGCCCTGCCGTTGACCAACAAGACCCTCTCCACCGCATTCTTCAATCCATTGCCTTCCAGGTCGATCGCCGCCGCCGCCGCCGC
CCCGAAATCCAACGGCAGGCTCCTCGTCGTCCGATCGTCCTTGAAGGAGAAGGCCGTCACCGGACTCACGGCCGCCGCGCTGACGGCGTCGATGGTGATTCCGGAGGTTG
CTGAGGCTGCCGGTCCTGGAATTTCTCCGTCGCTCAAGAACTTCTTGCTCAGCATTGCCGCCGGTGGAGCGGTGGTGGTAGCCATAGTCGGAGCTGTTATCGGCGTGTCG
AACTTCGATCCGGTCAAGCGTAGC
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAACTTCTGCACTTTCAATGGCCCTGCCGTTGACCAACAAGACCCTCTCCACCGCATTCTTCAATCCATTGCCTTCCAGGTCGATCGCCGCCGCCGCCGCCGC
CCCGAAATCCAACGGCAGGCTCCTCGTCGTCCGATCGTCCTTGAAGGAGAAGGCCGTCACCGGACTCACGGCCGCCGCGCTGACGGCGTCGATGGTGATTCCGGAGGTTG
CTGAGGCTGCCGGTCCTGGAATTTCTCCGTCGCTCAAGAACTTCTTGCTCAGCATTGCCGCCGGTGGAGCGGTGGTGGTAGCCATAGTCGGAGCTGTTATCGGCGTGTCG
AACTTCGATCCGGTCAAGCGTAGC
Protein sequenceShow/hide protein sequence
MASTSALSMALPLTNKTLSTAFFNPLPSRSIAAAAAAPKSNGRLLVVRSSLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGGAVVVAIVGAVIGVS
NFDPVKRS