; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g0830 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0830
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-box protein 1a
Genome locationMC06:6915126..6916988
RNA-Seq ExpressionMC06g0830
SyntenyMC06g0830
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144035.1 RING-box protein 1a [Cucumis sativus]1.01e-8196.58Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DV MVPAGEASSSAGP SSKK KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_022147540.1 RING-box protein 1a [Momordica charantia]1.27e-84100Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_022933228.1 RING-box protein 1a [Cucurbita moschata]3.51e-8297.44Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDV MVPAGEASSSAGP SSKK KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_023880628.1 RING-box protein 1a [Quercus suber]7.09e-8296.58Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDV MVP GEASSSAGP SSKK+KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_027926839.1 RING-box protein 1a isoform X2 [Vigna unguiculata]1.01e-8196.58Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDV+MVPAGE SSSAGP SSKK KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

TrEMBL top hitse value%identityAlignment
A0A2N9HDW3 RING-type domain-containing protein3.43e-8296.58Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDV MVP GEASSSAGP SSKK+KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A5D3CFD3 RING-box protein 1a4.88e-8296.58Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DV MVPAGEASSSAGP SSKK KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A6J1D0F3 RING-box protein 1a6.15e-85100Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A6J1F460 RING-box protein 1a1.70e-8297.44Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDV MVPAGEASSSAGP SSKK KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A6J1I027 RING-box protein 1a1.70e-8297.44Show/hide
Query:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDV MVPAGEASSSAGP SSKK KRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

SwissProt top hitse value%identityAlignment
P62877 E3 ubiquitin-protein ligase RBX12.2e-5284.26Show/hide
Query:  MVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE
        M  A +  + +G  S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN E
Subjt:  MVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE

Query:  WEFQKYGH
        WEFQKYGH
Subjt:  WEFQKYGH

P62878 E3 ubiquitin-protein ligase RBX12.2e-5284.26Show/hide
Query:  MVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE
        M  A +  + +G  S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN E
Subjt:  MVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE

Query:  WEFQKYGH
        WEFQKYGH
Subjt:  WEFQKYGH

Q8QG64 RING-box protein 16.4e-5283.33Show/hide
Query:  MVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE
        M  A +  + +   S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN E
Subjt:  MVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSE

Query:  WEFQKYGH
        WEFQKYGH
Subjt:  WEFQKYGH

Q940X7 RING-box protein 1a2.0e-6192.37Show/hide
Query:  MATLDSDVSMVPAGEASSS-AGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLDSDV+M+PAGEASSS A   S+KK+KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDSDVSMVPAGEASSS-AGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLDNSEWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

Q9M2B0 RING-box protein 1b2.0e-5384.75Show/hide
Query:  MATLDSDVSMVPAGEASSSAGP-LSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MA+L+SDV M   GE+SS + P  SSK SKRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDSDVSMVPAGEASSSAGP-LSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLD  EWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 115.8e-1639.56Show/hide
Query:  KSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLDNSEWEFQK
        K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F++
Subjt:  KSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLDNSEWEFQK

AT3G42830.1 RING/U-box superfamily protein1.4e-5484.75Show/hide
Query:  MATLDSDVSMVPAGEASSSAGP-LSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MA+L+SDV M   GE+SS + P  SSK SKRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDSDVSMVPAGEASSSAGP-LSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLD  EWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

AT5G20570.1 RING-box 11.4e-6292.37Show/hide
Query:  MATLDSDVSMVPAGEASSS-AGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLDSDV+M+PAGEASSS A   S+KK+KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDSDVSMVPAGEASSS-AGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLDNSEWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

AT5G20570.2 RING-box 11.6e-5876.76Show/hide
Query:  MATLDSDVSMVPAGEASSS-AGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------
        MATLDSDV+M+PAGEASSS A   S+KK+KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW                  
Subjt:  MATLDSDVSMVPAGEASSS-AGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------

Query:  ------GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
              GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Subjt:  ------GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH

AT5G20570.3 RING-box 12.1e-5879.41Show/hide
Query:  MATLDSDVSMVPAGEASSS-AGPLSSKKSKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        MATLDSDV+M+PAGEASSS A   S+KK+KRFEIKKW+AVALWAW                   IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MATLDSDVSMVPAGEASSS-AGPLSSKKSKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

Query:  GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
        GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Subjt:  GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACGTTGGATTCCGATGTGTCAATGGTTCCCGCTGGTGAGGCTTCGAGTAGTGCTGGCCCTTTATCTTCCAAGAAGTCTAAGCGATTCGAAATCAAGAAGTGGAA
TGCTGTCGCGCTCTGGGCTTGGGATATCGTGGTCGATAATTGTGCAATCTGTAGGAATCACATAATGGATCTCTGCATTGAATGTCAGGCAAATCAGGCGAGCGCCACTA
GTGAGGAATGTACTGTCGCCTGGGGGGTATGCAACCATGCTTTTCACTTCCACTGCATTAGTCGTTGGTTGAAGACCCGCCAAGTCTGTCCATTGGATAACAGTGAATGG
GAGTTCCAGAAGTATGGACATTAG
mRNA sequenceShow/hide mRNA sequence
AAACAAGAGGCTTGTGACACAAAGCCCAAACAAGATTCTTAACCTCCTCTCCTTCCAAGTCGTTCTGTTTTCAACACAAGCAACGATTCCCTCTTTTCTTCTACTCGCCG
GAATTTCCCCTCTCTCCCCTCCGCTGACCGGAGAACGGACGCTCTCTGATCTTCGTTTCCGCCATGGCTACGTTGGATTCCGATGTGTCAATGGTTCCCGCTGGTGAGGC
TTCGAGTAGTGCTGGCCCTTTATCTTCCAAGAAGTCTAAGCGATTCGAAATCAAGAAGTGGAATGCTGTCGCGCTCTGGGCTTGGGATATCGTGGTCGATAATTGTGCAA
TCTGTAGGAATCACATAATGGATCTCTGCATTGAATGTCAGGCAAATCAGGCGAGCGCCACTAGTGAGGAATGTACTGTCGCCTGGGGGGTATGCAACCATGCTTTTCAC
TTCCACTGCATTAGTCGTTGGTTGAAGACCCGCCAAGTCTGTCCATTGGATAACAGTGAATGGGAGTTCCAGAAGTATGGACATTAGGACCTTCATACCGTCGCAATTTC
GAAGGTCAAGCAATGCTACAGAAAATGTTTATTGGTCGGAAGTTCGAACCTCTTATGTCCATTCCCAAAATCCTTTTGAGGTTTGTTGTATGCATTTTTATAAATTTTAC
ATCAGAAGTAGATGAAGATCAATACTTTAATTCCTTCACCATGTGAATCTTAGACTCATCACTTCAAGTTCATGTATTGAGCTTTCCTCTCCGTATGTTTTGGGTTTGAA
TCAGAAAGCCAATTCTCTTCTTTATTATTGTAATGATTGTTGCTTAATATGATGATGAAAGTTCATCGTGTCTTTCATTTTCTACTGTGGGTATATTTAAAAATTGCTTC
GAAATGGCAGTGTTGATGTTTCTCCCAGCTGTTAGATGGTAATATCCCAGGGTCAATCAACATTCGAGGTTTATTAATGCCAATAGGAAATGTCATTATATATTTATTGC
CG
Protein sequenceShow/hide protein sequence
MATLDSDVSMVPAGEASSSAGPLSSKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEW
EFQKYGH