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MC06g0969 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0969
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box protein At3g07870-like
Genome locationMC06:8636275..8636754
RNA-Seq ExpressionMC06g0969
SyntenyMC06g0969
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132431.1 F-box protein At3g07870-like [Momordica charantia]4.56e-5059.88Show/hide
Query:  LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDPKQ--GMSSVASFSFHPDLSSAD-ISIINFCNGLLCC
        L P++I+LI  KLP  NLP CRLVCK WNN +LTCK    IS S+LF+AH SPF KL CVDLDPK    +SS+ SFSFHPDL S   ISIIN CNGLLCC
Subjt:  LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDPKQ--GMSSVASFSFHPDLSSAD-ISIINFCNGLLCC

Query:  YFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLS
         F   +P +T       + ILNPMTNEY   PIS  D     Y YG GFSPKTK YKL R S
Subjt:  YFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLS

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]5.24e-4762.73Show/hide
Query:  ELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISS-LFFAHTSPFR-KLHCVDLDPKQ--GMSSVASFSFHPD--LSSADISIINFCNGLLCC
        ELI LI  KLP  NLPSCRLVCK W+++VLT K    ISIS+ LF AH   F   L C+ LDPK   GM +VA F FHPD  LSS  ISI+NFCNGLLCC
Subjt:  ELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISS-LFFAHTSPFR-KLHCVDLDPKQ--GMSSVASFSFHPD--LSSADISIINFCNGLLCC

Query:  YFDRGRPTKTLLPCEG-EVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLAR
         F+  R TK + P E  EV ILNPMTNEYFKPPISNA +    Y Y FGFSPKTK YKL R
Subjt:  YFDRGRPTKTLLPCEG-EVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLAR

XP_022154078.1 F-box/LRR-repeat protein At2g43260-like [Momordica charantia]1.17e-5061.64Show/hide
Query:  PELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPF-RKLHCVDLDPKQGMSSVASFSFHPDLSSADISIINFCNGLLCCYFDR
        PELI+LI  KL   NLPSCRLVCK WNNLVLTC    PIS SSLFF H SP    L  +D+    G SSVASFSFH +   A ISII+ CNGLLCCY   
Subjt:  PELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPF-RKLHCVDLDPKQGMSSVASFSFHPDLSSADISIINFCNGLLCCYFDR

Query:  GRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSF
         R  +       E FILNPMTNEYFKPP SNAD  +  Y +GFGFS KTK YKL RLSF
Subjt:  GRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSF

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]1.47e-4456.36Show/hide
Query:  LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAH--TSPFRKLHCVDLDPK--QGMSSVASFSFHPDLSSAD--ISIINFCNGL
        L P++++LI  KLP  NLP+CRLV   WNNLVL+CKFD  ISIS+LFFAH  +   R LHCVDLDP+  +GMS+VASF+FHP++SS    ISIIN C+GL
Subjt:  LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAH--TSPFRKLHCVDLDPK--QGMSSVASFSFHPDLSSAD--ISIINFCNGL

Query:  LCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPI--SNADRVIRLYHYGFGFSPKTKHYKLAR
        +     + R         G V +LNPMTNEYFK P   S  D V + Y YG GFSP+TK YKLAR
Subjt:  LCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPI--SNADRVIRLYHYGFGFSPKTKHYKLAR

XP_038883771.1 putative F-box protein At1g60370 [Benincasa hispida]1.04e-4454.22Show/hide
Query:  LQPE-LIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDPK--QGMSSVASFSFHPDLSSADISIINFCNGLLCC
        L P+ +I++IL K+P  NLPSCRLVCK WNNLVLTCKFD P+ ISSL  A+  P R L+C+D + K  +GMSSV SF+FHP   ++ ISIIN CNGLL  
Subjt:  LQPE-LIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDPK--QGMSSVASFSFHPDLSSADISIINFCNGLLCC

Query:  YFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSF
           +    K+  P    + ILNPMTNEYFK P   +       R Y YG GFSP+TK YK+AR SF
Subjt:  YFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSF

TrEMBL top hitse value%identityAlignment
A0A0A0M1M5 F-box domain-containing protein3.54e-4152.98Show/hide
Query:  LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFA--HTSPFRKLHCVDLDPK--QGMSSVASFSFHPDLSSAD--ISIINFCNGL
        L P++++LI  KLP  NLP+CRLV   WNNL+ +CKFD  ISIS LFFA  ++S    LHCV+ DP+  +GMS+VASF+FHPDLSS    I+IIN C+GL
Subjt:  LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFA--HTSPFRKLHCVDLDPK--QGMSSVASFSFHPDLSSAD--ISIINFCNGL

Query:  LCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNA--DRVIRLYHYGFGFSPKTKHYKLARLSF
        +    ++ R     L     V +LNP+TNEYFK P S +  DRV   Y YG GFSP T  YKLAR  F
Subjt:  LCCYFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNA--DRVIRLYHYGFGFSPKTKHYKLARLSF

A0A5D3CM94 Putative F-box protein9.63e-4153.05Show/hide
Query:  ELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDP--KQGMSSVASFSFHPDLS--SADISIINFCNGLLCCYF
         +I++IL K+P  NL SCRLVCK WNNLVLTCKFD  + IS    A+  P R L+CVD DP   +GM+SV SFSFHP  S  S+ ISIIN CNGLL    
Subjt:  ELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDP--KQGMSSVASFSFHPDLS--SADISIINFCNGLLCCYF

Query:  DRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSF
         + +P          + ILNPMTNEYFK P   +       RLY YG GF+PK K YK+AR SF
Subjt:  DRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVI---RLYHYGFGFSPKTKHYKLARLSF

A0A6J1BS93 F-box protein At3g07870-like2.21e-5059.88Show/hide
Query:  LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDPKQ--GMSSVASFSFHPDLSSAD-ISIINFCNGLLCC
        L P++I+LI  KLP  NLP CRLVCK WNN +LTCK    IS S+LF+AH SPF KL CVDLDPK    +SS+ SFSFHPDL S   ISIIN CNGLLCC
Subjt:  LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDPKQ--GMSSVASFSFHPDLSSAD-ISIINFCNGLLCC

Query:  YFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLS
         F   +P +T       + ILNPMTNEY   PIS  D     Y YG GFSPKTK YKL R S
Subjt:  YFDRGRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLS

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like2.54e-4762.73Show/hide
Query:  ELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISS-LFFAHTSPFR-KLHCVDLDPKQ--GMSSVASFSFHPD--LSSADISIINFCNGLLCC
        ELI LI  KLP  NLPSCRLVCK W+++VLT K    ISIS+ LF AH   F   L C+ LDPK   GM +VA F FHPD  LSS  ISI+NFCNGLLCC
Subjt:  ELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISS-LFFAHTSPFR-KLHCVDLDPKQ--GMSSVASFSFHPD--LSSADISIINFCNGLLCC

Query:  YFDRGRPTKTLLPCEG-EVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLAR
         F+  R TK + P E  EV ILNPMTNEYFKPPISNA +    Y Y FGFSPKTK YKL R
Subjt:  YFDRGRPTKTLLPCEG-EVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLAR

A0A6J1DJA3 F-box/LRR-repeat protein At2g43260-like5.67e-5161.64Show/hide
Query:  PELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPF-RKLHCVDLDPKQGMSSVASFSFHPDLSSADISIINFCNGLLCCYFDR
        PELI+LI  KL   NLPSCRLVCK WNNLVLTC    PIS SSLFF H SP    L  +D+    G SSVASFSFH +   A ISII+ CNGLLCCY   
Subjt:  PELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPF-RKLHCVDLDPKQGMSSVASFSFHPDLSSADISIINFCNGLLCCYFDR

Query:  GRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSF
         R  +       E FILNPMTNEYFKPP SNAD  +  Y +GFGFS KTK YKL RLSF
Subjt:  GRPTKTLLPCEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCCAACCTGAGTTGATAAAGCTAATATTGTTGAAACTTCCCTCCGGGAATTTGCCCAGTTGTCGGCTCGTGTGTAAAGTATGGAACAATCTCGTCTTAACTTGTAAGTT
TGATCTTCCAATCTCAATTTCCAGTCTGTTTTTTGCCCATACTTCTCCTTTTCGCAAGCTCCATTGTGTGGACTTGGATCCTAAACAAGGGATGAGCAGTGTTGCCTCAT
TTAGTTTCCATCCTGATTTGTCCTCTGCTGATATCTCAATCATCAATTTTTGCAATGGACTCCTCTGTTGTTATTTTGACCGTGGACGACCCACCAAAACACTACTACCT
TGTGAAGGTGAAGTTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCTCCCATCTCGAACGCGGATAGGGTTATACGTCTATATCATTATGGATTTGGGTTTAG
TCCTAAAACAAAACACTACAAATTAGCAAGACTCTCCTTT
mRNA sequenceShow/hide mRNA sequence
CTCCAACCTGAGTTGATAAAGCTAATATTGTTGAAACTTCCCTCCGGGAATTTGCCCAGTTGTCGGCTCGTGTGTAAAGTATGGAACAATCTCGTCTTAACTTGTAAGTT
TGATCTTCCAATCTCAATTTCCAGTCTGTTTTTTGCCCATACTTCTCCTTTTCGCAAGCTCCATTGTGTGGACTTGGATCCTAAACAAGGGATGAGCAGTGTTGCCTCAT
TTAGTTTCCATCCTGATTTGTCCTCTGCTGATATCTCAATCATCAATTTTTGCAATGGACTCCTCTGTTGTTATTTTGACCGTGGACGACCCACCAAAACACTACTACCT
TGTGAAGGTGAAGTTTTCATATTAAATCCCATGACAAATGAGTACTTCAAACCTCCCATCTCGAACGCGGATAGGGTTATACGTCTATATCATTATGGATTTGGGTTTAG
TCCTAAAACAAAACACTACAAATTAGCAAGACTCTCCTTT
Protein sequenceShow/hide protein sequence
LQPELIKLILLKLPSGNLPSCRLVCKVWNNLVLTCKFDLPISISSLFFAHTSPFRKLHCVDLDPKQGMSSVASFSFHPDLSSADISIINFCNGLLCCYFDRGRPTKTLLP
CEGEVFILNPMTNEYFKPPISNADRVIRLYHYGFGFSPKTKHYKLARLSF