CuGenDBv2

Gene ID	MC06g0983
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	F-box protein
Genome location	MC06:8786144..8786771
RNA-Seq Expression	MC06g0983
Synteny	MC06g0983
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0053295.1 F-box protein [Cucumis melo var. makuwa]

4.48e-58

51.35

Show/hide

Query:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTRD  E PK+KEF NP VVYGI FHPQT      KIVYS GF
Subjt:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR++   R+   HS+VQ+FTLG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFD+A ++F +IPK + G+LSRC++  +IL++CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        AV Y      EIWVM++YG K+
Subjt:  AVAYLRENG-EIWVMKEYGAKE

TYK11886.1 F-box protein [Cucumis melo var. makuwa]

1.59e-58

51.8

Show/hide

Query:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTRD  E PK+KEF NP VVYGI FHPQT      KIVYS GF
Subjt:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR++   R+   HS+VQ+FTLG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFDLA ++F +IPK + G+LSRC++  +IL++CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        AV Y      EIWVM++YG K+
Subjt:  AVAYLRENG-EIWVMKEYGAKE

XP_004140601.3 F-box protein At3g07870 [Cucumis sativus]

3.54e-57

50.9

Show/hide

Query:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY    FIY PFTRD  E PK+K+F NP VVYGI FHPQT      KIVYS GF
Subjt:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR++   R+   HS+VQ+FTLGTSNWRSIG+          P+ +N +LH VSL  RH +GR+++SFDLA ++F +IPK + G+LSRC++  + L++CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        AV Y      EIWVM++YG KE
Subjt:  AVAYLRENG-EIWVMKEYGAKE

XP_008455966.1 PREDICTED: F-box protein At3g07870 [Cucumis melo]

2.79e-58

51.8

Show/hide

Query:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTRD  E PK+KEF NP VVYGI FHPQT      KIVYS GF
Subjt:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR++   R+   HS+VQ+FTLG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFDLA ++F +IPK + G+LSRC++  +IL++CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        AV Y      EIWVM++YG K+
Subjt:  AVAYLRENG-EIWVMKEYGAKE

XP_022140713.1 F-box protein At3g07870 [Momordica charantia]

2.10e-66

59.91

Show/hide

Query:  HLYLVDF-LHTTSQKPLKG---NFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF      ++P+K     F  +M  YDVVG  + L CLS+SLY  K FIY PFTRD  E PKTKEF NP VV GI FHPQT      KIVYS GF
Subjt:  HLYLVDF-LHTTSQKPLKG---NFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKFATVRPSG-----VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR   I+RYS  HS+VQIFTLGTSNWRSIGK       G     VN +LH VSL  R++LGRSL+SFDLAD+QF EIPK E G+LSRC+YH VILD CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKFATVRPSG-----VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        A AY      EIWVMKEYG  E
Subjt:  AVAYLRENG-EIWVMKEYGAKE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA51 F-box domain-containing protein

2.99e-57

50.9

Show/hide

Query:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY    FIY PFTRD  E PK+K+F NP VVYGI FHPQT      KIVYS GF
Subjt:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR++   R+   HS+VQ+FTLGTSNWRSIG+          P+ +N +LH VSL  RH +GR+++SFDLA ++F +IPK + G+LSRC++  + L++CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        AV Y      EIWVM++YG KE
Subjt:  AVAYLRENG-EIWVMKEYGAKE

A0A1S3C1Q1 F-box protein At3g07870

1.35e-58

51.8

Show/hide

Query:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTRD  E PK+KEF NP VVYGI FHPQT      KIVYS GF
Subjt:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR++   R+   HS+VQ+FTLG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFDLA ++F +IPK + G+LSRC++  +IL++CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        AV Y      EIWVM++YG K+
Subjt:  AVAYLRENG-EIWVMKEYGAKE

A0A5A7UHY1 F-box protein

2.17e-58

51.35

Show/hide

Query:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTRD  E PK+KEF NP VVYGI FHPQT      KIVYS GF
Subjt:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR++   R+   HS+VQ+FTLG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFD+A ++F +IPK + G+LSRC++  +IL++CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        AV Y      EIWVM++YG K+
Subjt:  AVAYLRENG-EIWVMKEYGAKE

A0A5D3CN80 F-box protein

7.70e-59

51.8

Show/hide

Query:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF     H  S K +   F  +M  YDVVG  +   CLS+SLY  K FIY PFTRD  E PK+KEF NP VVYGI FHPQT      KIVYS GF
Subjt:  HLYLVDF----LHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR++   R+   HS+VQ+FTLG+SNWRSIG+          P+ +N +LH VSL  RH LGR+++SFDLA ++F +IPK + G+LSRC++  +IL++CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKF-----ATVRPSGVNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        AV Y      EIWVM++YG K+
Subjt:  AVAYLRENG-EIWVMKEYGAKE

A0A6J1CIM5 F-box protein At3g07870

1.01e-66

59.91

Show/hide

Query:  HLYLVDF-LHTTSQKPLKG---NFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF
        HLY VDF      ++P+K     F  +M  YDVVG  + L CLS+SLY  K FIY PFTRD  E PKTKEF NP VV GI FHPQT      KIVYS GF
Subjt:  HLYLVDF-LHTTSQKPLKG---NFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDX-ERPKTKEFFNPGVVYGIRFHPQTN-----KIVYSLGF

Query:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKFATVRPSG-----VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF
        RR   I+RYS  HS+VQIFTLGTSNWRSIGK       G     VN +LH VSL  R++LGRSL+SFDLAD+QF EIPK E G+LSRC+YH VILD CL 
Subjt:  RRVRWIERYSYLHSKVQIFTLGTSNWRSIGKFATVRPSG-----VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYHSVILDECLF

Query:  AVAYLRENG-EIWVMKEYGAKE
        A AY      EIWVMKEYG  E
Subjt:  AVAYLRENG-EIWVMKEYGAKE

SwissProt top hits

e value

%identity

Alignment

Q9SFC7 F-box protein At3g07870

1.8e-25

37.66

Show/hide

Query:  HHLYLVDFLHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPF-TRDXERPK-TKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRR
        H L L +       K     F  SM  +DVVG  + L CLS+SLY    ++Y PF T   E P+ + ++ +  +V+G  FH  T      KIVY  G   
Subjt:  HHLYLVDFLHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPF-TRDXERPK-TKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRR

Query:  -----VRWIERYSYLHSKVQIFTLGTS------NWRSIGK--FATVRPSG---VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYH
              R   R  Y  S+VQI TL +       +WRS+GK  +  V+ S    VN +LH V+   RH   R  +SFDL D++F EIPK + G L+R ++ 
Subjt:  -----VRWIERYSYLHSKVQIFTLGTS------NWRSIGK--FATVRPSG---VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYH

Query:  SVILDECLFAVAYLRENG-EIWVMKEYGAKE
         V L  CL AV Y      +IWVMK YG KE
Subjt:  SVILDECLFAVAYLRENG-EIWVMKEYGAKE

Arabidopsis top hits

e value

%identity

Alignment

AT3G07870.1 F-box and associated interaction domains-containing protein

1.3e-26

37.66

Show/hide

Query:  HHLYLVDFLHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPF-TRDXERPK-TKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRR
        H L L +       K     F  SM  +DVVG  + L CLS+SLY    ++Y PF T   E P+ + ++ +  +V+G  FH  T      KIVY  G   
Subjt:  HHLYLVDFLHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPF-TRDXERPK-TKEFFNPGVVYGIRFHPQTN-----KIVYSLGFRR

Query:  -----VRWIERYSYLHSKVQIFTLGTS------NWRSIGK--FATVRPSG---VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYH
              R   R  Y  S+VQI TL +       +WRS+GK  +  V+ S    VN +LH V+   RH   R  +SFDL D++F EIPK + G L+R ++ 
Subjt:  -----VRWIERYSYLHSKVQIFTLGTS------NWRSIGK--FATVRPSG---VNDKLHXVSLSWRHNLGRSLMSFDLADKQFXEIPKSELGTLSRCSYH

Query:  SVILDECLFAVAYLRENG-EIWVMKEYGAKE
         V L  CL AV Y      +IWVMK YG KE
Subjt:  SVILDECLFAVAYLRENG-EIWVMKEYGAKE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CATCACCTATATTTGGTGGATTTTCTTCACACAACATCTCAGAAGCCACTCAAGGGAAATTTTCACTTCTCAATGTCACCGTATGATGTGGTAGGTTTTTCTGATGTCTT
GTTCTGTTTATCCAATTCTCTTTACTACGTTAAGTTCTTTATATATTACCCCTTTACGAGAGACTAGGAGCGGCCTAAAACCAAGGAATTTTTTAACCCTGGTGTGGTGT
ATGGGATTAGATTTCACCCACAAACAAACAAAATTGTGTACTCTCTAGGGTTTCGTAGGGTTCGTTGGATTGAGAGATACTCTTATCTCCACTCGAAGGTTCAAATTTTC
ACTCTTGGAACCTCCAATTGGAGGAGCATTGGCAAATTTGCCACTGTCCGGCCTAGTGGAGTCAATGACAAACTCCACTAGGTATCTTTGTCGTGGCGGCACAACCTCGG
CCGTAGCCTCATGTCGTTCGACTTGGCCGACAAGCAATTTTAGGAAATTCCAAAGTCGGAATTGGGGACCTTGAGCCGATGCAGTTACCATTCGGTGATTCTTGACGAGT
GCCTCTTCGCTGTGGCCTACCTACGGGAAAATGGAGAGATATGGGTGATGAAAGAGTACGGGGCGAAAGAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

HHLYLVDFLHTTSQKPLKGNFHFSMSPYDVVGFSDVLFCLSNSLYYVKFFIYYPFTRDUERPKTKEFFNPGVVYGIRFHPQTNKIVYSLGFRRVRWIERYSYLHSKVQIF
TLGTSNWRSIGKFATVRPSGVNDKLHUVSLSWRHNLGRSLMSFDLADKQFUEIPKSELGTLSRCSYHSVILDECLFAVAYLRENGEIWVMKEYGAKE

MC06g0983 (gene) of Bitter gourd (Dali-11) v1 genome