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MC06g0990 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g0990
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationMC06:8923479..8923715
RNA-Seq ExpressionMC06g0990
SyntenyMC06g0990
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU19204.1 hypothetical protein TSUD_198870 [Trifolium subterraneum]5.65e-2475.41Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-----NLGGDGYKNGG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KVD W        + GDGYKNGG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-----NLGGDGYKNGG
KAA0046436.1 reverse transcriptase [Cucumis melo var. makuwa]2.38e-2589.8Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLGG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KVD WVWNLGG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLGG
KAF1856602.1 hypothetical protein Lal_00038468 [Lupinus albus]6.15e-2475.41Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-----NLGGDGYKNGG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KVD W        + GDGYKNGG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-----NLGGDGYKNGG
YP_008992271.1 hypothetical protein Salmi_Mp005 [Salvia miltiorrhiza]1.11e-2362.67Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-------------------NLGGDGYKNGG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KVD WVW                    + GD YKNGG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-------------------NLGGDGYKNGG
YP_010048797.1 hypothetical protein J6695_mgp18 [Aquilaria sinensis]7.95e-2487.5Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KV  WVWNLG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLG
TrEMBL top hitse value%identityAlignment
A0A2Z6LN30 Uncharacterized protein2.74e-2475.41Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-----NLGGDGYKNGG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KVD W        + GDGYKNGG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-----NLGGDGYKNGG
A0A5A7TWJ9 Reverse transcriptase1.15e-2589.8Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLGG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KVD WVWNLGG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLGG
A0A6A5LD88 Uncharacterized protein2.98e-2475.41Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-----NLGGDGYKNGG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KVD W        + GDGYKNGG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-----NLGGDGYKNGG
A0A7T0KAA0 Uncharacterized protein3.85e-2487.5Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KV  WVWNLG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLG
V9P5J2 Uncharacterized protein5.35e-2462.67Show/hide
Query:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-------------------NLGGDGYKNGG
        +NRGEPSDDLSKIR EILSSGDPFTLPRTDTCT CSY KVD WVW                    + GD YKNGG
Subjt:  VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVW-------------------NLGGDGYKNGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAACCGCGGCGAACCATCAGACGACCTATCTAAGATTAGGAGGGAGATCCTCAGTAGTGGTGACCCTTTCACTCTTCCACGGACTGATACATGTACTGGATGCTCATA
CGTGAAAGTTGATCCCTGGGTTTGGAATCTGGGGGGTGACGGTTACAAGAATGGTGGA
mRNA sequenceShow/hide mRNA sequence
GTGAACCGCGGCGAACCATCAGACGACCTATCTAAGATTAGGAGGGAGATCCTCAGTAGTGGTGACCCTTTCACTCTTCCACGGACTGATACATGTACTGGATGCTCATA
CGTGAAAGTTGATCCCTGGGTTTGGAATCTGGGGGGTGACGGTTACAAGAATGGTGGA
Protein sequenceShow/hide protein sequence
VNRGEPSDDLSKIRREILSSGDPFTLPRTDTCTGCSYVKVDPWVWNLGGDGYKNGG