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MC06g1052 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1052
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationMC06:10198261..10198625
RNA-Seq ExpressionMC06g1052
SyntenyMC06g1052
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW42678.1 hypothetical protein CK203_103887 [Vitis vinifera]4.36e-1636.19Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF
        C LCK S E+IDHLFLHC      W  +    G+    PR ++D+ +  F   G  L+ K +   A   ++WL+W+ERN+R+FEDK   EE+    ++ +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF

Query:  ALQWS
        +  W+
Subjt:  ALQWS

RVW61049.1 putative ribonuclease H protein [Vitis vinifera]4.33e-1534.29Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF
        C LCK + E+IDHLFLHC      W  +    G+    PR I+D+ + +F   G  ++ K +   A   ++W++W+ERN+R+FEDK   EE+    ++ +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF

Query:  ALQWS
        +  W+
Subjt:  ALQWS

RVW61436.1 hypothetical protein CK203_032021 [Vitis vinifera]1.88e-1534.29Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF
        C LCK + E+IDHLFLHC      W  +    G+    PR I+D+ + +F   G  ++ K +   A   ++W++W+ERN+R+FEDK   EE+    ++ +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF

Query:  ALQWS
        +  W+
Subjt:  ALQWS

RVX11717.1 putative ribonuclease H protein [Vitis vinifera]4.33e-1534.29Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF
        C LCK + E+IDHLFLHC      W  +    G+    PR I+D+ + +F   G  ++ K +   A   ++W++W+ERN+R+FEDK   EE+    ++ +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF

Query:  ALQWS
        +  W+
Subjt:  ALQWS

RVX20160.1 Protein RETICULATA, chloroplastic [Vitis vinifera]3.92e-1535.24Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF
        C LCK + E+IDHLFLHC      W  +    G+S   PR I+D+ + +F   G  ++ K +   A   ++W++W+ERN+R+FEDK   EE+    ++ +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF

Query:  ALQWS
        +  W+
Subjt:  ALQWS

TrEMBL top hitse value%identityAlignment
A0A2N9G0B5 zf-RVT domain-containing protein1.39e-1633.96Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETGLKAKFMLSCAGRAVLWLIWKERNSRLFED----KKSLEEIFCSNVQ
        C +C+ + E++DHLFLHC  A   W FV   FG+   +P R  DL        G ++  + +     +LW  W ERN R+FE+    +  L E FC ++ 
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETGLKAKFMLSCAGRAVLWLIWKERNSRLFED----KKSLEEIFCSNVQ

Query:  HFALQW
        H++ +W
Subjt:  HFALQW

A0A2N9GUC1 Reverse transcriptase domain-containing protein1.39e-1535.45Show/hide
Query:  KKCGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETGLKAKFMLSCAGRAVLWLIWKERNSRLFEDK----KSLEEIFCSN
        ++C +C C  ET+DHL LHC  A   W+FV T FGI    PRR+ DL L      G     + +     ++W +W+ERN+R FE+       L+EIF ++
Subjt:  KKCGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETGLKAKFMLSCAGRAVLWLIWKERNSRLFEDK----KSLEEIFCSN

Query:  VQHFALQWSI
        +  ++  W +
Subjt:  VQHFALQWSI

A0A438E4N8 zf-RVT domain-containing protein2.11e-1636.19Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF
        C LCK S E+IDHLFLHC      W  +    G+    PR ++D+ +  F   G  L+ K +   A   ++WL+W+ERN+R+FEDK   EE+    ++ +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF

Query:  ALQWS
        +  W+
Subjt:  ALQWS

A0A438FNA2 zf-RVT domain-containing protein9.09e-1634.29Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF
        C LCK + E+IDHLFLHC      W  +    G+    PR I+D+ + +F   G  ++ K +   A   ++W++W+ERN+R+FEDK   EE+    ++ +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF

Query:  ALQWS
        +  W+
Subjt:  ALQWS

A0A438KG54 Protein RETICULATA, chloroplastic1.90e-1535.24Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF
        C LCK + E+IDHLFLHC      W  +    G+S   PR I+D+ + +F   G  ++ K +   A   ++W++W+ERN+R+FEDK   EE+    ++ +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETG--LKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHF

Query:  ALQWS
        +  W+
Subjt:  ALQWS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.1e-0530Show/hide
Query:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETGLKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEI
        CGLC    E  DHLFL C FA   W  V     +  F     +DL              +     ++VL+ IWK+RN+ L   +  L  +
Subjt:  CGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETGLKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCTTGAACTGTAAAAAGTGCGGGCTTTGTAAATGCTCGGCAGAAACGATTGACCACCTCTTTCTTCATTGTTTTTTTGCTACTTCGGCTTGGGCGTTTGTTCGTACGGA
GTTTGGTATTTCGTTATTCCTTCCTAGGAGGATTGACGATCTGTTTCTTGAGAATTTTGGGGAGACTGGCTTAAAGGCAAAGTTTATGTTAAGTTGTGCTGGGAGGGCAG
TCCTATGGTTGATCTGGAAGGAAAGGAATAGTAGGCTTTTTGAAGACAAGAAGTCCCTTGAGGAGATTTTTTGTAGCAATGTACAGCATTTTGCTTTGCAGTGGTCCATA
AATCACAAGAAATTCTTTTGTAATTATAGT
mRNA sequenceShow/hide mRNA sequence
TCCTTGAACTGTAAAAAGTGCGGGCTTTGTAAATGCTCGGCAGAAACGATTGACCACCTCTTTCTTCATTGTTTTTTTGCTACTTCGGCTTGGGCGTTTGTTCGTACGGA
GTTTGGTATTTCGTTATTCCTTCCTAGGAGGATTGACGATCTGTTTCTTGAGAATTTTGGGGAGACTGGCTTAAAGGCAAAGTTTATGTTAAGTTGTGCTGGGAGGGCAG
TCCTATGGTTGATCTGGAAGGAAAGGAATAGTAGGCTTTTTGAAGACAAGAAGTCCCTTGAGGAGATTTTTTGTAGCAATGTACAGCATTTTGCTTTGCAGTGGTCCATA
AATCACAAGAAATTCTTTTGTAATTATAGT
Protein sequenceShow/hide protein sequence
SLNCKKCGLCKCSAETIDHLFLHCFFATSAWAFVRTEFGISLFLPRRIDDLFLENFGETGLKAKFMLSCAGRAVLWLIWKERNSRLFEDKKSLEEIFCSNVQHFALQWSI
NHKKFFCNYS