CuGenDBv2

Gene ID	MC06g1078
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	MC06:10878757..10879086
RNA-Seq Expression	MC06g1078
Synteny	MC06g1078
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009507 - chloroplast (cellular component) GO:0009522 - photosystem I (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR020586 - Photosystem I PsaA/PsaB, conserved site IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AKJ77611.1 photosystem I P700 chlorophyll a apoprotein A1, partial [Dioscorea nipponica]

5.22e-75

98.18

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSST+GPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLA+FWMLNT
Subjt:  YLAVFWMLNT

KMS96938.1 hypothetical protein BVRB_7g180200 [Beta vulgaris subsp. vulgaris]

5.65e-75

100

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

PVH34236.1 hypothetical protein PAHAL_8G178600 [Panicum hallii]

6.06e-75

99.09

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSST+GPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

QTD82090.1 photosystem I P700 apoprotein A2 [Toona sinensis]

3.57e-75

98.18

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSST+GPAFNAGRSIWLPGWLNA+NENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

RXI09871.1 hypothetical protein DVH24_034250 [Malus domestica]

2.95e-75

99.09

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSST+GPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

TrEMBL top hits

e value

%identity

Alignment

A0A0J8BAE8 Photosystem I

2.74e-75

100

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

A0A0K0N827 Photosystem I (Fragment)

2.53e-75

98.18

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSST+GPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLA+FWMLNT
Subjt:  YLAVFWMLNT

A0A1J3DPN9 Photosystem I (Fragment)

2.19e-77

98.18

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSST+GPAFNAGRSIWLPGWLNA+NENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

A0A2T8I973 Photosystem I

2.93e-75

99.09

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSST+GPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

A0A498KRU4 Photosystem I

1.43e-75

99.09

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSST+GPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

SwissProt top hits

e value

%identity

Alignment

A0A334 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-61

100

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

Q0G9M0 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-61

100

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

Q1KXW0 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-61

100

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-61

100

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Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

Q8S8X5 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-61

100

Show/hide

Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

1.3e-62

99.09

Show/hide

Query:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
        LLSSTSGPAFNAGRSIWLPGWLNA+NENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF
Subjt:  LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAF

Query:  YLAVFWMLNT
        YLAVFWMLNT
Subjt:  YLAVFWMLNT

ATCG00350.1 Photosystem I, PsaA/PsaB protein

7.6e-26

Show/hide

Query:  LLSSTSGPAFNAGRSI-WLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDA
        L    + P   A  S+ W  G L AV      L + +G  DFLVHH  A  +H T LIL+KG L AR S+L+PDK + G+ FPCDGPGRGGTC +SAWD 
Subjt:  LLSSTSGPAFNAGRSI-WLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDA

Query:  FYLAVFWMLN
         +L +FWM N
Subjt:  FYLAVFWMLN

Sequences

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CDS sequence

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CTTTTATCTTCAACAAGCGGCCCGGCGTTCAATGCGGGTCGAAGCATATGGTTGCCTGGTTGGTTAAATGCTGTTAATGAGAATAGTAATTCACTATTCTTAACAATAGG
GCCCGGCGACTTCTTGGTTCATCATGCTATTGCTTTAGGTTTACATACAACTACATTGATCTTAGTAAAAGGTGCTTTAGATGCACGTGGTTCCAAATTAATGCCGGATA
AAAAGGATTTTGGTTATAGTTTTCCTTGCGACGGTCCGGGACGAGGTGGTACTTGTGATATTTCGGCTTGGGACGCCTTTTATTTGGCAGTTTTCTGGATGTTAAATACA

mRNA sequence

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Protein sequence

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LLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNT

MC06g1078 (gene) of Bitter gourd (Dali-11) v1 genome