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MC06g1082 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1082
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionORF43m
Genome locationMC06:10996394..10996639
RNA-Seq ExpressionMC06g1082
SyntenyMC06g1082
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0032549 - ribonucleoside binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]2.19e-5397.56Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
KAB8477470.1 hypothetical protein FH972_025336 [Carpinus fangiana]3.01e-5195.12Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGS R PSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
PQP98136.1 hypothetical protein Pyn_20559 [Prunus yedoensis var. nudiflora]4.27e-5195.12Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKE KSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
QHE65624.1 ORF43m [Nitraria roborowskii]3.78e-5498.78Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
YP_009758287.1 hypothetical protein [Rubus amabilis]4.27e-5195.12Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKE KSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
TrEMBL top hitse value%identityAlignment
A0A5N6L147 Uncharacterized protein1.46e-5195.12Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGS R PSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
A0A6B9QF48 ORF43m1.83e-5498.78Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
A0A6B9QFK3 ORF43m1.83e-5498.78Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
A0A6B9QGL2 ORF43m1.83e-5498.78Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
U5CKY2 Uncharacterized protein1.06e-5397.56Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQG LR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACT
ATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGATGCCTTC
GGTATCCAGGGGTCGCGGACCGACCA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACT
ATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGATGCCTTC
GGTATCCAGGGGTCGCGGACCGACCA
Protein sequenceShow/hide protein sequence
MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGCLRYPGVADRP