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MC06g1104 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1104
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein TIC 214
Genome locationMC06:11563434..11563568
RNA-Seq ExpressionMC06g1104
SyntenyMC06g1104
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEK78254.1 hypothetical chloroplast RF1, partial [Phaulothamnus spinescens]1.63e-1888.89Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGSTS NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
AEK78274.1 hypothetical chloroplast RF1, partial [Rivina humilis]1.13e-1888.89Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGSTS NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
AEK78297.1 hypothetical chloroplast RF1, partial [Talinum paniculatum]1.63e-1888.89Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGSTS NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
GFP85212.1 protein tic 214 [Phtheirospermum japonicum]9.65e-1984.44Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ NSMRN S+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
XP_024027079.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112093245 [Morus notabilis]1.59e-1886.67Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
TrEMBL top hitse value%identityAlignment
A0A287QTH2 Uncharacterized protein1.59e-1986.67Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
G0YEI0 Hypothetical chloroplast RF1 (Fragment)7.89e-1988.89Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGSTS NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
G0YEJ5 Hypothetical chloroplast RF1 (Fragment)7.89e-1988.89Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGSTS NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
G0YEL5 Hypothetical chloroplast RF1 (Fragment)5.46e-1988.89Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGSTS NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
G0YEN8 Hypothetical chloroplast RF1 (Fragment)7.89e-1988.89Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGSTS NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
SwissProt top hitse value%identityAlignment
A6MM95 Protein TIC 2143.7e-1686.67Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
Q09WW0 Protein TIC 2143.7e-1686.67Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
Q49KU0 Protein TIC 2143.7e-1686.67Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
Q8S8U2 Protein TIC 2143.7e-1686.67Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
Q9M3J5 Protein TIC 2141.7e-1688.89Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGSTS NSMRNLS+QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
Arabidopsis top hitse value%identityAlignment
AT2G07739.1 Ycf1 protein7.2e-1580.43Show/hide
Query:  RIHTITVLALPYLLFH-FFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFH FF NN KHFFDYGST+ N MRNL +QCVF
Subjt:  RIHTITVLALPYLLFH-FFRNNQKHFFDYGSTSTNSMRNLSLQCVF
ATCG01000.1 Ycf1 protein2.9e-1682.22Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ N MRNL +QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
ATCG01130.1 Ycf1 protein2.9e-1682.22Show/hide
Query:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFHFF NN KHFFDYGST+ N MRNL +QCVF
Subjt:  RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF
ATMG00370.1 Ycf1 protein7.2e-1580.43Show/hide
Query:  RIHTITVLALPYLLFH-FFRNNQKHFFDYGSTSTNSMRNLSLQCVF
        R HTITVLALPYLLFH FF NN KHFFDYGST+ N MRNL +QCVF
Subjt:  RIHTITVLALPYLLFH-FFRNNQKHFFDYGSTSTNSMRNLSLQCVF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGATTCATACAATAACTGTTCTAGCTCTACCATATCTTTTGTTTCATTTCTTCCGGAACAATCAGAAACACTTTTTTGATTATGGATCTACTTCCACAAACTCAATGCG
CAATCTTAGCCTTCAATGTGTATTC
mRNA sequenceShow/hide mRNA sequence
AGGATTCATACAATAACTGTTCTAGCTCTACCATATCTTTTGTTTCATTTCTTCCGGAACAATCAGAAACACTTTTTTGATTATGGATCTACTTCCACAAACTCAATGCG
CAATCTTAGCCTTCAATGTGTATTC
Protein sequenceShow/hide protein sequence
RIHTITVLALPYLLFHFFRNNQKHFFDYGSTSTNSMRNLSLQCVF