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MC06g1121 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1121
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC06:12054860..12055152
RNA-Seq ExpressionMC06g1121
SyntenyMC06g1121
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.45e-0432.67Show/hide
Query:  KDDETSERASFISLLSTYKPSNGSNYWAWNFERS--FSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMAL
        +D E +   +  + L T  P+ G     WN   +  F T S+   +     S +N+   +YK +W   +PK  KF +W+  H C+NT DR QKR P   L
Subjt:  KDDETSERASFISLLSTYKPSNGSNYWAWNFERS--FSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMAL

Query:  S
        S
Subjt:  S

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.71e-0638.36Show/hide
Query:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS
        W  N    F T S+   L+   +S +N+   +YK +W  ++PK  KF +W+  H C+NT DR QKR P   LS
Subjt:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS

KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.13e-0539.73Show/hide
Query:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS
        W  N    F T S+   L+    S +N+   +YK +W   +PK  KF +W+  H C+NT DR QKR P  ALS
Subjt:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.67e-0638.36Show/hide
Query:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS
        W  N    F T S+   L+   +S +N+   +YK +W  ++PK  KF +W+  H C+NT DR QKR P   LS
Subjt:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS

TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.12e-0539.73Show/hide
Query:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS
        W  N    F T S+   L+    S +N+   +YK +W   +PK  KF +W+  H C+NT DR QKR P  ALS
Subjt:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein7.02e-0532.67Show/hide
Query:  KDDETSERASFISLLSTYKPSNGSNYWAWNFERS--FSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMAL
        +D E +   +  + L T  P+ G     WN   +  F T S+   +     S +N+   +YK +W   +PK  KF +W+  H C+NT DR QKR P   L
Subjt:  KDDETSERASFISLLSTYKPSNGSNYWAWNFERS--FSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMAL

Query:  S
        S
Subjt:  S

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein4.22e-0638.36Show/hide
Query:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS
        W  N    F T S+   L+   +S +N+   +YK +W  ++PK  KF +W+  H C+NT DR QKR P   LS
Subjt:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein4.20e-0638.36Show/hide
Query:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS
        W  N    F T S+   L+   +S +N+   +YK +W  ++PK  KF +W+  H C+NT DR QKR P   LS
Subjt:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS

A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein1.03e-0539.73Show/hide
Query:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS
        W  N    F T S+   L+    S +N+   +YK +W   +PK  KF +W+  H C+NT DR QKR P  ALS
Subjt:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS

A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein1.03e-0539.73Show/hide
Query:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS
        W  N    F T S+   L+    S +N+   +YK +W   +PK  KF +W+  H C+NT DR QKR P  ALS
Subjt:  WAWNFERSFSTKSLANRLTWEISSNSNY---IYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGATGACGAAACAAGTGAGCGGGCATCTTTTATCTCTCTTTTATCAACGTATAAACCCTCCAACGGAAGCAACTATTGGGCTTGGAATTTTGAAAGGTCTTTTTCTAC
TAAATCCTTGGCCAACAGACTTACATGGGAAATATCTTCAAACAGTAATTACATTTACAAGCTGATTTGGAACGAGAACTACCCAAAAAATATAAAATTCCTCCTCTGGA
GCTCAGAACACACTTGCCTCAATACCCATGACCGTGGGCAAAAAAGACATCCATGGATGGCACTCTCC
mRNA sequenceShow/hide mRNA sequence
AAGGATGACGAAACAAGTGAGCGGGCATCTTTTATCTCTCTTTTATCAACGTATAAACCCTCCAACGGAAGCAACTATTGGGCTTGGAATTTTGAAAGGTCTTTTTCTAC
TAAATCCTTGGCCAACAGACTTACATGGGAAATATCTTCAAACAGTAATTACATTTACAAGCTGATTTGGAACGAGAACTACCCAAAAAATATAAAATTCCTCCTCTGGA
GCTCAGAACACACTTGCCTCAATACCCATGACCGTGGGCAAAAAAGACATCCATGGATGGCACTCTCC
Protein sequenceShow/hide protein sequence
KDDETSERASFISLLSTYKPSNGSNYWAWNFERSFSTKSLANRLTWEISSNSNYIYKLIWNENYPKNIKFLLWSSEHTCLNTHDRGQKRHPWMALS