; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g1158 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1158
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L35a-1-like
Genome locationMC06:13320037..13320702
RNA-Seq ExpressionMC06g1158
SyntenyMC06g1158
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR018266 - Ribosomal protein L35Ae, conserved site
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463199.1 PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo]7.25e-7596.43Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022139205.1 60S ribosomal protein L35a-1-like [Momordica charantia]7.53e-77100Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022156649.1 60S ribosomal protein L35a-1-like [Momordica charantia]1.78e-7598.21Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGREGERVRLYIRGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNL PKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022156899.1 60S ribosomal protein L35a-1 [Momordica charantia]1.07e-7699.11Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGREGERVRLYIRGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_038891868.1 60S ribosomal protein L35a-1 [Benincasa hispida]2.96e-7495.54Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKV RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

TrEMBL top hitse value%identityAlignment
A0A0A0KM11 Uncharacterized protein3.51e-7596.43Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A5A7T1I6 Ribosomal protein L35A3.51e-7596.43Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A6J1CBN5 60S ribosomal protein L35a-1-like3.65e-77100Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A6J1DU58 60S ribosomal protein L35a-1-like8.61e-7698.21Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGREGERVRLYIRGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNL PKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A6J1DUY8 60S ribosomal protein L35a-15.18e-7799.11Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGREGERVRLYIRGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B4.0e-2753.33Show/hide
Query:  ERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFM
        E  RLY++G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+Y+A  +  G+  R +WGKV R HGNSG+VRA F++NLP K+ G  VR+F+
Subjt:  ERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFM

Query:  YPSNI
        YPSNI
Subjt:  YPSNI

P51422 60S ribosomal protein L35a-41.9e-5385.59Show/hide
Query:  VKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD
        +KGR+GERVRLY+RGTVLGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

Q9C912 60S ribosomal protein L35a-31.3e-5485.71Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY+RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

Q9FZH0 60S ribosomal protein L35a-21.5e-5385.59Show/hide
Query:  VKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD
        +KGR+GERVRLY+RGTVLGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

Q9LMK0 60S ribosomal protein L35a-11.3e-5485.71Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY+RGT+LGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein9.4e-5685.71Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY+RGT+LGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

AT1G41880.1 Ribosomal protein L35Ae family protein1.0e-5485.59Show/hide
Query:  VKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD
        +KGR+GERVRLY+RGTVLGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

AT1G74270.1 Ribosomal protein L35Ae family protein9.4e-5685.71Show/hide
Query:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY+RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNG+HYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

AT3G55750.1 Ribosomal protein L35Ae family protein1.4e-5485.59Show/hide
Query:  VKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD
        +KGR+GERVRLY+RGTVLGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAGGAAGGGAAGGAGAGAGAGTCAGACTCTACATCCGCGGAACAGTTCTCGGCTACAAGAGGTCTAAATCCAATCAGTACCCGAACACTTCATTACTCCAGAT
CGAGGGTGTTAATTCCAAGGACGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGG
GCAAGGTCGCTAGGCCTCATGGTAACAGTGGCATTGTTAGAGCGAAGTTCAAGTCTAATCTGCCACCAAAGTCCATGGGTGACAGGGTCAGGGTATTCATGTACCCCAGC
AACATT
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAAGGAAGGGAAGGAGAGAGAGTCAGACTCTACATCCGCGGAACAGTTCTCGGCTACAAGAGGTCTAAATCCAATCAGTACCCGAACACTTCATTACTCCAGAT
CGAGGGTGTTAATTCCAAGGACGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGG
GCAAGGTCGCTAGGCCTCATGGTAACAGTGGCATTGTTAGAGCGAAGTTCAAGTCTAATCTGCCACCAAAGTCCATGGGTGACAGGGTCAGGGTATTCATGTACCCCAGC
AACATT
Protein sequenceShow/hide protein sequence
MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPS
NI