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MC06g1207 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1207
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionZinc finger (C3HC4-type RING finger) family protein
Genome locationMC06:16099267..16099440
RNA-Seq ExpressionMC06g1207
SyntenyMC06g1207
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019278.1 hypothetical protein SDJN02_18238, partial [Cucurbita argyrosperma subsp. argyrosperma]7.48e-0748.72Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCHS-ATPTLSSFGLQLSKSSTRSSK
        M STWKKLK+ALGFN CL+                          S  SF  DCH   TPT SS GL+LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCHS-ATPTLSSFGLQLSKSSTRSSK
XP_004139556.1 E3 ubiquitin-protein ligase WAV3 [Cucumis sativus]2.14e-0750Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
        MGSTWKK+K+ALG N CL+                          SS SF  DC  SATPT SS GL+LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
XP_008462750.1 PREDICTED: uncharacterized protein LOC103501034 isoform X1 [Cucumis melo]5.47e-0748.72Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
        MGSTWKK+K+ALG N CL+                          SS SF  DC  +ATPT SS GL+LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
XP_022152920.1 uncharacterized protein LOC111020532 [Momordica charantia]6.85e-0950.65Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCHSATPTLSSFGLQLSKSSTRSSK
        MG+TWKKLK+ALGFN CL+                          S  SFG DC  ATPT SS GL LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCHSATPTLSSFGLQLSKSSTRSSK
XP_022970296.1 uncharacterized protein LOC111469304 [Cucurbita maxima]5.47e-0746.91Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA--------------------------SSTSFGFDCHS-ATPTLSSFGLQLSKSSTRSSK
        M STWKKLK+ALGFN CL+                             S  SF  DCH   TPT SS GL+LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA--------------------------SSTSFGFDCHS-ATPTLSSFGLQLSKSSTRSSK
TrEMBL top hitse value%identityAlignment
A0A0A0LXX5 Uncharacterized protein1.04e-0750Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
        MGSTWKK+K+ALG N CL+                          SS SF  DC  SATPT SS GL+LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
A0A1S3CHN5 uncharacterized protein LOC103501034 isoform X12.65e-0748.72Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
        MGSTWKK+K+ALG N CL+                          SS SF  DC  +ATPT SS GL+LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
A0A5A7SVZ9 Uncharacterized protein2.65e-0748.72Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
        MGSTWKK+K+ALG N CL+                          SS SF  DC  +ATPT SS GL+LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCH-SATPTLSSFGLQLSKSSTRSSK
A0A6J1DFB3 uncharacterized protein LOC1110205323.31e-0950.65Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCHSATPTLSSFGLQLSKSSTRSSK
        MG+TWKKLK+ALGFN CL+                          S  SFG DC  ATPT SS GL LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA-----------------------SSTSFGFDCHSATPTLSSFGLQLSKSSTRSSK
A0A6J1I080 uncharacterized protein LOC1114693042.65e-0746.91Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSA--------------------------SSTSFGFDCHS-ATPTLSSFGLQLSKSSTRSSK
        M STWKKLK+ALGFN CL+                             S  SF  DCH   TPT SS GL+LSKSSTRSSK
Subjt:  MGSTWKKLKIALGFNTCLWLSA--------------------------SSTSFGFDCHS-ATPTLSSFGLQLSKSSTRSSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38970.1 Zinc finger (C3HC4-type RING finger) family protein5.1e-0535.14Show/hide
Query:  MGSTWKKLKIALGFNTCLWLSASSTSFGFDCHSA----------------TPTLSSFGLQLSKSSTRSSKVCSV
        MG+ W+++K+ALG N C +L  +        +S                 TPT SS GL+LS++S++SSK CS+
Subjt:  MGSTWKKLKIALGFNTCLWLSASSTSFGFDCHSA----------------TPTLSSFGLQLSKSSTRSSKVCSV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGTACATGGAAGAAATTGAAGATTGCTCTCGGCTTCAACACGTGCCTATGGCTCTCGGCTTCCTCGACCAGTTTTGGCTTCGATTGCCACTCAGCCACACCCAC
TTTGTCGTCTTTTGGTCTCCAACTCTCCAAGTCATCAACAAGATCCTCAAAGGTTTGTTCGGTC
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGTACATGGAAGAAATTGAAGATTGCTCTCGGCTTCAACACGTGCCTATGGCTCTCGGCTTCCTCGACCAGTTTTGGCTTCGATTGCCACTCAGCCACACCCAC
TTTGTCGTCTTTTGGTCTCCAACTCTCCAAGTCATCAACAAGATCCTCAAAGGTTTGTTCGGTC
Protein sequenceShow/hide protein sequence
MGSTWKKLKIALGFNTCLWLSASSTSFGFDCHSATPTLSSFGLQLSKSSTRSSKVCSV