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MC06g1218 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1218
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPMD domain-containing protein
Genome locationMC06:16639477..16639680
RNA-Seq ExpressionMC06g1218
SyntenyMC06g1218
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025723.1 uncharacterized protein E6C27_scaffold653G00020 [Cucumis melo var. makuwa]6.93e-2360.29Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ +YW+WLE+VVA     L  A +FD +MA  YTYD N+D VRAFCEAWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

KAA0033523.1 hypothetical protein E6C27_scaffold261G00660 [Cucumis melo var. makuwa]7.60e-2258.82Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ ++W+WLE+ VA     L  A +FD +MAS YTYD N+D+VRAFCEAWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]1.84e-2160.29Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ +YW+WLE+ VA     L  AH+FDA+MAS YTYD N+D+VRAF +AWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

TYJ95665.1 hypothetical protein E5676_scaffold104G00970 [Cucumis melo var. makuwa]9.03e-2358.82Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ ++W+WLE+ VA     L  A +FD +MAS YTYD N+D+VRAFCEAWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

TYK06154.1 uncharacterized protein E5676_scaffold287G00020 [Cucumis melo var. makuwa]9.80e-2360.29Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ +YW+WLE+VVA     L  A +FD +MA  YTYD N+D VRAFCEAWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

TrEMBL top hitse value%identityAlignment
A0A5A7SM27 PMD domain-containing protein3.36e-2360.29Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ +YW+WLE+VVA     L  A +FD +MA  YTYD N+D VRAFCEAWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

A0A5A7SRI5 Uncharacterized protein8.90e-2260.29Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ +YW+WLE+ VA     L  AH+FDA+MAS YTYD N+D+VRAF +AWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

A0A5A7SST7 PMD domain-containing protein3.68e-2258.82Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ ++W+WLE+ VA     L  A +FD +MAS YTYD N+D+VRAFCEAWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

A0A5D3BB02 PMD domain-containing protein4.37e-2358.82Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ ++W+WLE+ VA     L  A +FD +MAS YTYD N+D+VRAFCEAWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

A0A5D3C4B8 PMD domain-containing protein4.75e-2360.29Show/hide
Query:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS
        +LK+H EFYY+ +YW+WLE+VVA     L  A +FD +MA  YTYD N+D VRAFCEAWC ST TLH+
Subjt:  ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATACTGAAGATCCATGTGGAATTCTATTATATTGATTATTATTGGGACTGGTTAGAGGTTGTGGTTGCTAGTTGTAAGAAAACTCTTTGTGATGCTCATATATTTGATGC
AATAATGGCTTCTCAATATACGTATGACCATAACAACGATGTGGTGCGAGCTTTTTGCGAGGCTTGGTGTCGTTCAACACGCACTCTACATTCT
mRNA sequenceShow/hide mRNA sequence
ATACTGAAGATCCATGTGGAATTCTATTATATTGATTATTATTGGGACTGGTTAGAGGTTGTGGTTGCTAGTTGTAAGAAAACTCTTTGTGATGCTCATATATTTGATGC
AATAATGGCTTCTCAATATACGTATGACCATAACAACGATGTGGTGCGAGCTTTTTGCGAGGCTTGGTGTCGTTCAACACGCACTCTACATTCT
Protein sequenceShow/hide protein sequence
ILKIHVEFYYIDYYWDWLEVVVASCKKTLCDAHIFDAIMASQYTYDHNNDVVRAFCEAWCRSTRTLHS