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MC06g1220 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1220
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCalcium-binding EF hand family protein
Genome locationMC06:16668349..16668714
RNA-Seq ExpressionMC06g1220
SyntenyMC06g1220
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9854184.1 hypothetical protein H0E87_005977 [Populus deltoides]9.16e-2945.24Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGF---------RSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAI
        MS+A +N+TTV  F+ D K F+NCVKE F+ LD+D DG+L+ +EL  GF          S  + +D L  T+  +F+ ++SG I+  EFK ++ E++ A+
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGF---------RSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAI

Query:  AYGIGNLPLQVALQQDGLLMKAVEHE
          G GN P+ VAL+ D LLMKAVEHE
Subjt:  AYGIGNLPLQVALQQDGLLMKAVEHE

TYJ95513.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa]2.53e-5473.44Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GF S        DPVDDL + VC KFNVEKSGGI+ENEFKSVV +ILLA+A G
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG

Query:  IGNLPLQVALQQDGLLMKAVEHERAKEE
        IGN PLQVALQQD  LMKAVE E+AKE+
Subjt:  IGNLPLQVALQQDGLLMKAVEHERAKEE

XP_004142569.1 uncharacterized protein LOC101222885 [Cucumis sativus]3.59e-5471.88Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GFRS        DPVDDLS+ VC KF VEKSGGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG

Query:  IGNLPLQVALQQDGLLMKAVEHERAKEE
        IGN PLQVALQQD  LMKAVE E+A+E+
Subjt:  IGNLPLQVALQQDGLLMKAVEHERAKEE

XP_008462771.1 PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]2.94e-5371.88Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GF S        DPVDDL + VC KFNVEKSGGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG

Query:  IGNLPLQVALQQDGLLMKAVEHERAKEE
        IGN PLQVALQQD  LMKAVE E+AKE+
Subjt:  IGNLPLQVALQQDGLLMKAVEHERAKEE

XP_022158640.1 uncharacterized protein LOC111025096 [Momordica charantia]1.38e-78100Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPL
        MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPL
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPL

Query:  QVALQQDGLLMKAVEHERAKEE
        QVALQQDGLLMKAVEHERAKEE
Subjt:  QVALQQDGLLMKAVEHERAKEE

TrEMBL top hitse value%identityAlignment
A0A0A0LYD8 Uncharacterized protein1.74e-5471.88Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GFRS        DPVDDLS+ VC KF VEKSGGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG

Query:  IGNLPLQVALQQDGLLMKAVEHERAKEE
        IGN PLQVALQQD  LMKAVE E+A+E+
Subjt:  IGNLPLQVALQQDGLLMKAVEHERAKEE

A0A1S3CI80 uncharacterized protein LOC1035010581.42e-5371.88Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GF S        DPVDDL + VC KFNVEKSGGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG

Query:  IGNLPLQVALQQDGLLMKAVEHERAKEE
        IGN PLQVALQQD  LMKAVE E+AKE+
Subjt:  IGNLPLQVALQQDGLLMKAVEHERAKEE

A0A5A7VAA7 Calcium-binding EF hand family protein1.42e-5371.88Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GF S        DPVDDL + VC KFNVEKSGGI+E EFKSV+ +ILLA+A G
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG

Query:  IGNLPLQVALQQDGLLMKAVEHERAKEE
        IGN PLQVALQQD  LMKAVE E+AKE+
Subjt:  IGNLPLQVALQQDGLLMKAVEHERAKEE

A0A5D3B8A7 Calcium-binding EF hand family protein1.22e-5473.44Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG
        MSVAFLNDTTV +FINDTKIFD+CVKESF+KLD D DG LN NEL  GF S        DPVDDL + VC KFNVEKSGGI+ENEFKSVV +ILLA+A G
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG

Query:  IGNLPLQVALQQDGLLMKAVEHERAKEE
        IGN PLQVALQQD  LMKAVE E+AKE+
Subjt:  IGNLPLQVALQQDGLLMKAVEHERAKEE

A0A6J1DWE2 uncharacterized protein LOC1110250966.71e-79100Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPL
        MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPL
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPL

Query:  QVALQQDGLLMKAVEHERAKEE
        QVALQQDGLLMKAVEHERAKEE
Subjt:  QVALQQDGLLMKAVEHERAKEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.3e-1333.88Show/hide
Query:  LNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST---------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIG
        +   T+I F++DTK F++   + FQ LD+DK+G+L+ +EL  G  +           D  D++   +  +F  +    +    F+ ++ EIL A+A GIG
Subjt:  LNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSST---------DPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIG

Query:  NLPLQVALQQDGLLMKAVEHE
        N P+ + +  DGL+MKAV HE
Subjt:  NLPLQVALQQDGLLMKAVEHE

AT2G44310.1 Calcium-binding EF-hand family protein7.4e-1432.61Show/hide
Query:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRS--------------STDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTE
        M V  ++ +TV  F++D + F   V E F  LD++KDG+L+ +EL   F S                D + +L  ++  KF+ ++SG ++  EF+S + +
Subjt:  MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRS--------------STDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTE

Query:  ILLAIAYGIGNLPLQVAL--QQDGLLMKAVEHERAKEE
        I+LAIA G+G+ P+ + L    D  L KA + E +K E
Subjt:  ILLAIAYGIGNLPLQVAL--QQDGLLMKAVEHERAKEE

AT4G38810.2 Calcium-binding EF-hand family protein1.0e-0728.07Show/hide
Query:  LNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGF-----------RSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG
        L+ + +++ + + K+FD  V++ FQ+LD D+DG L+  EL               + ++   D +   V  +F       +++ EFK V+++ILL +A G
Subjt:  LNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGF-----------RSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYG

Query:  IGNLPLQVALQQDG
        +   P+ V L+ DG
Subjt:  IGNLPLQVALQQDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGCTTTTCTCAACGACACAACAGTGATAGATTTTATCAATGATACAAAGATATTTGACAACTGCGTGAAGGAAAGTTTCCAGAAACTCGACATTGAC
AAAGATGGCATCCTCAATGCAAATGAACTTCTGGCCGGGTTTCGTAGTTCAACGGATCCAGTAGATGATCTTTCTCAGACGGTTTGTCGCAAGTTTAATGTGGAA
AAAAGTGGTGGTATCAATGAAAATGAGTTTAAGTCGGTCGTAACGGAGATTCTTCTCGCCATTGCTTATGGGATTGGAAACTTACCTCTCCAAGTTGCACTTCAA
CAAGATGGCCTCCTCATGAAGGCCGTTGAACATGAAAGGGCCAAAGAAGAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGCTTTTCTCAACGACACAACAGTGATAGATTTTATCAATGATACAAAGATATTTGACAACTGCGTGAAGGAAAGTTTCCAGAAACTCGACATTGAC
AAAGATGGCATCCTCAATGCAAATGAACTTCTGGCCGGGTTTCGTAGTTCAACGGATCCAGTAGATGATCTTTCTCAGACGGTTTGTCGCAAGTTTAATGTGGAA
AAAAGTGGTGGTATCAATGAAAATGAGTTTAAGTCGGTCGTAACGGAGATTCTTCTCGCCATTGCTTATGGGATTGGAAACTTACCTCTCCAAGTTGCACTTCAA
CAAGATGGCCTCCTCATGAAGGCCGTTGAACATGAAAGGGCCAAAGAAGAA
Protein sequenceShow/hide protein sequence
MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSSTDPVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPLQVALQ
QDGLLMKAVEHERAKEE