CuGenDBv2

Gene ID	MC06g1248
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein translocase subunit SecA
Genome location	MC06:18255766..18259181
RNA-Seq Expression	MC06g1248
Synteny	MC06g1248
Gene Ontology terms	NA
InterPro domains	IPR004027 - SEC-C motif

Homology

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GenBank top hits

e value

%identity

Alignment

TYK10174.1 protein translocase subunit SecA [Cucumis melo var. makuwa]

9.14e-130

85.4

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ
        MRSSSR LI LSK+++WNP+LFFP+S+ +        TLLQSRSIFSTTQL GSW+DKIKGVITGKK+T +G++ISS+SFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAKNCNCTIA+VENAL+KF+WAKEAQKKIEKL+EEGKPLP SI+EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

XP_004135658.1 uncharacterized protein LOC101217561 [Cucumis sativus]

2.14e-128

84.51

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ
        MRSSSR LIN SKR++WNP+LFFP S+ +        TLLQSRSIFSTTQL GSW+DKIKGVI+GKK++ +G++ISS+SFTLLRFADELKNARRVGA KQ
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAKNCNCTIAEVENAL+KF+WAKEAQKKIEKL+EEGKPLP +I+EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

XP_008450751.1 PREDICTED: protein translocase subunit SecA [Cucumis melo]

6.41e-130

85.4

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ
        MRSSSR LI LSK+++WNP+LFFP+S+ +        TLLQSRSIFSTTQL GSW+DKIKGVITGKK+T +G++ISS+SFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAKNCNCTIA+VENAL+KF+WAKEAQKKIEKL+EEGKPLP SI+EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

XP_022155404.1 uncharacterized protein LOC111022549 [Momordica charantia]

1.59e-149

100

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNSTLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSS
        MRSSSRLLINLSKRSSWNPDLFFPLSTPNSTLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSS
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNSTLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSS

Query:  EATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLARSNLAKS
        EATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLARSNLAKS
Subjt:  EATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLARSNLAKS

Query:  GQISRNALCPCGSKKRYKR
        GQISRNALCPCGSKKRYKR
Subjt:  GQISRNALCPCGSKKRYKR

XP_038878551.1 protein translocase subunit SecA 1 [Benincasa hispida]

6.11e-128

84.51

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ
        MRSSSR LIN SK+S+WNP+LFFP S+ +        TLLQSRSIFSTTQL GSW+DKIKGVITGKKS  DG++ISS+SFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAK CNCTIA+VEN LAKF+WAK+AQ KIEKL+ EGKPLP SI+EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQ+SRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWL6 Uncharacterized protein

1.03e-128

84.51

Show/hide

Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ
        MRSSSR LIN SKR++WNP+LFFP S+ +        TLLQSRSIFSTTQL GSW+DKIKGVI+GKK++ +G++ISS+SFTLLRFADELKNARRVGA KQ
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAKNCNCTIAEVENAL+KF+WAKEAQKKIEKL+EEGKPLP +I+EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

A0A1S3BPC0 protein translocase subunit SecA

3.11e-130

85.4

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ
        MRSSSR LI LSK+++WNP+LFFP+S+ +        TLLQSRSIFSTTQL GSW+DKIKGVITGKK+T +G++ISS+SFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAKNCNCTIA+VENAL+KF+WAKEAQKKIEKL+EEGKPLP SI+EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

A0A5D3CG47 Protein translocase subunit SecA

4.43e-130

85.4

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ
        MRSSSR LI LSK+++WNP+LFFP+S+ +        TLLQSRSIFSTTQL GSW+DKIKGVITGKK+T +G++ISS+SFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNS-------TLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFD TGENIQTSQKQEAAKNCNCTIA+VENAL+KF+WAKEAQKKIEKL+EEGKPLP SI+EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

A0A6J1DQ67 uncharacterized protein LOC111022549

7.72e-150

100

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNSTLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSS
        MRSSSRLLINLSKRSSWNPDLFFPLSTPNSTLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSS
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPNSTLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSS

Query:  EATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLARSNLAKS
        EATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLARSNLAKS
Subjt:  EATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLARSNLAKS

Query:  GQISRNALCPCGSKKRYKR
        GQISRNALCPCGSKKRYKR
Subjt:  GQISRNALCPCGSKKRYKR

A0A6J1EXB8 uncharacterized protein LOC111439055

1.15e-125

84.07

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Query:  MRSSSRLLINLSKRSSWNPDLFFPLSTPN-------STLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ
        MRSSSR+LINLS+ ++ N +LFFP S+ +       STLLQSRSIFSTTQL  SW+DKIKG  TGKKS  +G+EISS+SFTLLRFADELKNARRVGAFKQ
Subjt:  MRSSSRLLINLSKRSSWNPDLFFPLSTPN-------STLLQSRSIFSTTQLQGSWVDKIKGVITGKKSTPDGSEISSQSFTLLRFADELKNARRVGAFKQ

Query:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA
        YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAK CNCTIA+VEN LAKFIWAKEAQKKIEKL+EEGKP+PKS++EVQKLVGSNPLDLA
Subjt:  YIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLA

Query:  RSNLAKSGQISRNALCPCGSKKRYKR
        RSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  RSNLAKSGQISRNALCPCGSKKRYKR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G04950.1 CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).

2.7e-72

72.19

Show/hide

Query:  QSRSIFSTTQLQGSWVDKIKGVITGKKSTP-DGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQ
        Q RSI ST  L G W+D IKGV TG K TP + S +  ++FTLLRFADELKNARR+G FKQYIVGRSSEATFADAFEKQEA+IRYLG  D TGEN+Q SQ
Subjt:  QSRSIFSTTQLQGSWVDKIKGVITGKKSTP-DGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQ

Query:  KQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
        KQ+AAK+C CTI +VEN L+KF WA++A KK+ +L+E GKPLPK++ E+QK++GS P+DLARSNLAKSGQISRNALCPCGSKKRYKR
Subjt:  KQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEGKPLPKSISEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR

Sequences

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CDS sequence

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TTTGAGTCAATTTACCGTCAAACTGCCCACCCGCTGCCCACCCAGCCTGAATATTCGTCGCGAAAAACCTCCGAATTGGCTAAAACCCTACTTCTCAATTCCAACCTGAA
GAAGCCGATTGATTCAGAACTCTTTCGTTTTCTCAAAATGCGTTCCTCCTCTCGACTCCTAATCAATCTTTCCAAGAGGAGCTCCTGGAATCCCGATCTGTTCTTCCCCT
TATCGACTCCTAATTCGACTCTGTTACAGTCCCGATCCATCTTCTCCACGACGCAGCTTCAGGGTTCATGGGTGGACAAGATCAAGGGAGTCATCACTGGAAAAAAGAGC
ACTCCTGATGGAAGCGAAATCAGCTCCCAGTCCTTCACTCTTCTTCGGTTTGCTGATGAGTTGAAAAATGCCCGAAGAGTGGGGGCATTCAAGCAATACATTGTTGGAAG
AAGCAGTGAAGCTACTTTTGCGGATGCTTTTGAGAAGCAGGAAGCGATTATTCGCTATTTGGGAGGTTTTGATCCCACAGGAGAGAACATCCAAACTAGCCAAAAGCAAG
AAGCAGCTAAAAATTGTAACTGCACGATTGCTGAGGTTGAGAATGCACTGGCAAAGTTTATCTGGGCTAAAGAAGCGCAAAAGAAGATTGAGAAGTTAAGGGAAGAAGGA
AAACCTTTGCCGAAGAGTATTTCCGAGGTCCAGAAACTAGTGGGTTCAAATCCATTGGATCTTGCTAGGTCAAATTTGGCCAAGAGTGGCCAGATCAGCAGGAATGCTTT
ATGTCCTTGTGGTTCCAAGAAGAGATATAAACGG

mRNA sequence

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Protein sequence

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FESIYRQTAHPLPTQPEYSSRKTSELAKTLLLNSNLKKPIDSELFRFLKMRSSSRLLINLSKRSSWNPDLFFPLSTPNSTLLQSRSIFSTTQLQGSWVDKIKGVITGKKS
TPDGSEISSQSFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIAEVENALAKFIWAKEAQKKIEKLREEG
KPLPKSISEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR

MC06g1248 (gene) of Bitter gourd (Dali-11) v1 genome