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MC06g1255 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1255
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC06:18570781..18571175
RNA-Seq ExpressionMC06g1255
SyntenyMC06g1255
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062494.1 uncharacterized protein E6C27_scaffold130G00900 [Cucumis melo var. makuwa]1.22e-1038.21Show/hide
Query:  KHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITT-KRGVFLVNVVATNEATKPSFPSV
        KH R+ +   + GW+KI +L L+ W    F+VIG  L GL  I++ TLN  +CS   IQ+DKN  GF+ ++ EIT  KRG   ++     E   P  PS 
Subjt:  KHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITT-KRGVFLVNVVATNEATKPSFPSV

Query:  QLSKTSLIIDSSNPLDIQKLQEV
         L    L+ D  N +D  K+++V
Subjt:  QLSKTSLIIDSSNPLDIQKLQEV

TYJ98837.1 putative 3,4-dihydroxy-2-butanone kinase isoform X5 [Cucumis melo var. makuwa]4.39e-0940.7Show/hide
Query:  FHVKM-KWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEIT
        FH+K+ +W+  KH    +   +GGW+KI +L L+ W     +VIG    GL  I+  TLN  + S   IQ+ KN  GF+P++IEIT
Subjt:  FHVKM-KWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEIT

TYK01560.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.85e-0729.59Show/hide
Query:  VKMKWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITTKRGVFLVNVVATNE
        +K++WN + H R      +GGW+K+ +    LWN   FK +G  L G    +    + +DC    I++  N  GF+P   ++      FLV V +  E
Subjt:  VKMKWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITTKRGVFLVNVVATNE

XP_031738083.1 uncharacterized protein LOC116402658 [Cucumis sativus]3.14e-0740.48Show/hide
Query:  KHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITT-KRG-VFL
        KH R  +   +GGW+K+ +L L+LW+   F+ IG    G  KI+  TLN  +CS   IQ+ +N  GF+ ++ EI+  KRG +FL
Subjt:  KHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITT-KRG-VFL

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]6.46e-1232.84Show/hide
Query:  FHVKM-KWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITT-KRGVFLVNVVAT
        FH+K  +WN   H R      +GGW+ I +L L+ W    F+ IG    GL+ I++  LN +      I++ +N  GF+PA+IE++  KRG   +N    
Subjt:  FHVKM-KWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITT-KRGVFLVNVVAT

Query:  NEATKPSFPSVQLSKTSLIIDSSNPLDIQKLQEV
        + +  PS     L ++    D +NP+D+ +L EV
Subjt:  NEATKPSFPSVQLSKTSLIIDSSNPLDIQKLQEV

TrEMBL top hitse value%identityAlignment
A0A5A7V878 DUF4283 domain-containing protein2.64e-0739.06Show/hide
Query:  FGGWVKICDLTLELWNTYCFKVIGTL-EGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEI
        +GGW+ I +L L+ W+   +K IG    G + ISL T+N ++CS   I++ +N  GF+PA +E+
Subjt:  FGGWVKICDLTLELWNTYCFKVIGTL-EGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEI

A0A5D3BI91 Putative 3,4-dihydroxy-2-butanone kinase isoform X52.13e-0940.7Show/hide
Query:  FHVKM-KWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEIT
        FH+K+ +W+  KH    +   +GGW+KI +L L+ W     +VIG    GL  I+  TLN  + S   IQ+ KN  GF+P++IEIT
Subjt:  FHVKM-KWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEIT

A0A5D3BR42 LINE-1 retrotransposable element ORF2 protein8.98e-0829.59Show/hide
Query:  VKMKWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITTKRGVFLVNVVATNE
        +K++WN + H R      +GGW+K+ +    LWN   FK +G  L G    +    + +DC    I++  N  GF+P   ++      FLV V +  E
Subjt:  VKMKWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITTKRGVFLVNVVATNE

A0A5D3DVS9 Uncharacterized protein5.89e-1138.21Show/hide
Query:  KHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITT-KRGVFLVNVVATNEATKPSFPSV
        KH R+ +   + GW+KI +L L+ W    F+VIG  L GL  I++ TLN  +CS   IQ+DKN  GF+ ++ EIT  KRG   ++     E   P  PS 
Subjt:  KHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITT-KRGVFLVNVVATNEATKPSFPSV

Query:  QLSKTSLIIDSSNPLDIQKLQEV
         L    L+ D  N +D  K+++V
Subjt:  QLSKTSLIIDSSNPLDIQKLQEV

A0A5D3E3A5 Ulp1-like peptidase2.85e-0639.19Show/hide
Query:  FHVKM-KWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKN
        FH+   KW++  H R      F GW+ I +L L+LW    F+VIG    GL+  +L TLN + C+   IQ+ KN
Subjt:  FHVKM-KWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGT-LEGLKKISLATLNPLDCSTTFIQIDKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTCACGTGAAGATGAAGTGGAATCTTGAAAAACATGACAGGAACGAAATGACAGTTTGTTTTGGTGGCTGGGTGAAAATCTGCGACTTAACTTTAGAGCTCTGGAACAC
ATATTGCTTCAAGGTCATTGGAACCCTCGAAGGTTTGAAGAAAATCTCTTTAGCAACACTAAATCCATTAGATTGTTCAACAACTTTTATTCAAATAGATAAGAATGACT
ATGGCTTTATTCCGGCTTCCATCGAGATAACTACGAAACGTGGAGTGTTTCTGGTAAACGTGGTTGCCACAAATGAAGCTACCAAGCCATCTTTTCCCTCCGTTCAGCTT
TCAAAGACTTCATTGATTATAGATTCTTCAAATCCATTGGATATCCAAAAATTGCAAGAAGTC
mRNA sequenceShow/hide mRNA sequence
TTTCACGTGAAGATGAAGTGGAATCTTGAAAAACATGACAGGAACGAAATGACAGTTTGTTTTGGTGGCTGGGTGAAAATCTGCGACTTAACTTTAGAGCTCTGGAACAC
ATATTGCTTCAAGGTCATTGGAACCCTCGAAGGTTTGAAGAAAATCTCTTTAGCAACACTAAATCCATTAGATTGTTCAACAACTTTTATTCAAATAGATAAGAATGACT
ATGGCTTTATTCCGGCTTCCATCGAGATAACTACGAAACGTGGAGTGTTTCTGGTAAACGTGGTTGCCACAAATGAAGCTACCAAGCCATCTTTTCCCTCCGTTCAGCTT
TCAAAGACTTCATTGATTATAGATTCTTCAAATCCATTGGATATCCAAAAATTGCAAGAAGTC
Protein sequenceShow/hide protein sequence
FHVKMKWNLEKHDRNEMTVCFGGWVKICDLTLELWNTYCFKVIGTLEGLKKISLATLNPLDCSTTFIQIDKNDYGFIPASIEITTKRGVFLVNVVATNEATKPSFPSVQL
SKTSLIIDSSNPLDIQKLQEV