; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g1264 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1264
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontrafficking protein particle complex subunit 6B
Genome locationMC06:18891719..18891877
RNA-Seq ExpressionMC06g1264
SyntenyMC06g1264
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0043087 - regulation of GTPase activity (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007194 - Transport protein particle (TRAPP) component
IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily
IPR037992 - TRAPP complex, Trs33 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7817872.1 trafficking protein particle complex subunit 6B [Senna tora]7.73e-2794.34Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        MVREVSESCVDSLLTEMV++YCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
XP_022154611.1 trafficking protein particle complex subunit 6B [Momordica charantia]6.08e-2898.11Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
XP_022961590.1 trafficking protein particle complex subunit 6B [Cucurbita moschata]6.96e-2796.23Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        M REVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
XP_023545328.1 trafficking protein particle complex subunit 6B [Cucurbita pepo subsp. pepo]6.96e-2796.23Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        M REVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
XP_031256591.1 trafficking protein particle complex subunit 6B-like [Pistacia vera]7.34e-2796.23Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        M REVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
TrEMBL top hitse value%identityAlignment
A0A6A2YZ53 Putative histone H2AXb-like4.78e-2794.34Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        M REVSESC+DSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
A0A6J1A796 trafficking protein particle complex subunit 6B4.78e-2794.34Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        M REVSESC+DSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
A0A6J1DP88 trafficking protein particle complex subunit 6B2.94e-2898.11Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
A0A6J1HCN4 trafficking protein particle complex subunit 6B3.37e-2796.23Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        M REVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
A0A6J1I0Q5 trafficking protein particle complex subunit 6B3.37e-2796.23Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        M REVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05000.1 Transport protein particle (TRAPP) component5.7e-1981.13Show/hide
Query:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS
        M REV+ESCVD++L EMV+ Y  RFYANKPELAARRIEAIGYQVGHQLSERY+
Subjt:  MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAGAGGTTTCAGAGAGCTGCGTTGACAGCCTTTTGACGGAGATGGTTTCTACATATTGCAATCGCTTCTACGCCAATAAGCCGGAGCTCGCCGCCCGTCGCAT
CGAGGCAATCGGCTATCAGGTTGGCCACCAGCTCTCCGAACGGTACTCC
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGAGAGGTTTCAGAGAGCTGCGTTGACAGCCTTTTGACGGAGATGGTTTCTACATATTGCAATCGCTTCTACGCCAATAAGCCGGAGCTCGCCGCCCGTCGCAT
CGAGGCAATCGGCTATCAGGTTGGCCACCAGCTCTCCGAACGGTACTCC
Protein sequenceShow/hide protein sequence
MVREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYS