CuGenDBv2

Gene ID	MC06g1405
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	UBA domain-containing protein
Genome location	MC06:21290754..21292862
RNA-Seq Expression	MC06g1405
Synteny	MC06g1405
Gene Ontology terms	GO:0043162 - ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process) GO:0000813 - ESCRT I complex (cellular component) GO:0043130 - ubiquitin binding (molecular function)
InterPro domains	IPR009060 - UBA-like superfamily IPR015940 - Ubiquitin-associated domain IPR038870 - Ubiquitin-associated protein 1 IPR042575 - Ubiquitin-associated protein 1, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7035731.1 hypothetical protein SDJN02_02529 [Cucurbita argyrosperma subsp. argyrosperma]

1.36e-130

82.46

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP
        MAYDYRNKPG+Y++HPPMYGP AS+SPSPS+HPMY  + S+YPRIGQQGHSPAPPVAR+SSHHHSSS    PS PSSSGLGI VTIKPEYRITPPPQLSP
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP

Query:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF
        Q+ DIPRSNFQFDFEFEKKVLAEAEKET NW+RFGL++ P++P E +S+MGS GDPV SKY+ASGL+REAV  AVANYGDNPTKVQEF KGYTLLREMGF
Subjt:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF

Query:  SSNKVVEALLMYDNDTDKAVAHFLSGTS
         SNKVVEALLMYDNDTDKAVAHFL GTS
Subjt:  SSNKVVEALLMYDNDTDKAVAHFLSGTS

XP_022157118.1 uncharacterized protein LOC111023918 isoform X1 [Momordica charantia]

1.09e-160

100

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD
        MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD

Query:  IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK
        IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLSG
        VVEALLMYDNDTDKAVAHFLSG
Subjt:  VVEALLMYDNDTDKAVAHFLSG

XP_022157119.1 uncharacterized protein LOC111023918 isoform X2 [Momordica charantia]

4.46e-162

100

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD
        MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD

Query:  IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK
        IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLSGTS
        VVEALLMYDNDTDKAVAHFLSGTS
Subjt:  VVEALLMYDNDTDKAVAHFLSGTS

XP_022958203.1 uncharacterized protein LOC111459499 [Cucurbita moschata]

2.97e-131

82.46

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP
        MAYDYRNKPG+Y++HPPMYGP AS+SPSPS+HPMY  + S+YPRIGQQGHSPAPPVAR+SSHHHSSS    PS PSSSGLGI VTIKPEYRITPPPQLSP
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP

Query:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF
        Q+ DIPRSNFQFDFEFEKKVLAEAEKET NW+RFGL++ P++P E +S+MGS GDPV SKY+ASGL+REAV  AVANYGDNPTKVQEF KGYTLLREMGF
Subjt:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF

Query:  SSNKVVEALLMYDNDTDKAVAHFLSGTS
         SNKVVEALLMYDNDTDKAVAHFL GTS
Subjt:  SSNKVVEALLMYDNDTDKAVAHFLSGTS

XP_023534738.1 uncharacterized protein LOC111796216 [Cucurbita pepo subsp. pepo]

8.50e-131

82.02

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP
        MAYDYRNKPG+Y++HPPMYGP AS+SPSPS+HPMY  + S+YPRIGQQGHSPAPPVAR+SSHHHSSS    PS PSSSGLGI VTIKPEYRITPPPQLSP
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP

Query:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF
        Q+ DIPRSNFQFDFEFEKKVLAEAEKET NW+RFGL++ P++P E +S+MGS GDPV +KY+ASGL+REAV  AVANYGDNPTKVQEF KGYTLLREMGF
Subjt:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF

Query:  SSNKVVEALLMYDNDTDKAVAHFLSGTS
         SNKVVEALLMYDNDTDKAVAHFL GTS
Subjt:  SSNKVVEALLMYDNDTDKAVAHFLSGTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNB8 Uncharacterized protein

6.76e-125

81.86

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPP--SSSGLGIGVTIKPEYRITPPPQLSPQI
        MAYD+RN  GHYDSH PMY   AS+SPSPS HPMY HSM  YPRIGQQ  S  PPVAR+SSHH+SSSPSP   SSSGLGI VTIKPEYRITPPPQLSPQ+
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPP--SSSGLGIGVTIKPEYRITPPPQLSPQI

Query:  RDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSS
         DIPRSNFQFDFEFEKKVLAEAEKE  NW+RFGL++ P KP E TS+MGS+GDPV SKY+ASGLNREAV FAVANYGDNPTKVQEF KGYTLLREMGFSS
Subjt:  RDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLSGTS
         KVVEALLMYDNDTDKAVAHFL GTS
Subjt:  NKVVEALLMYDNDTDKAVAHFLSGTS

A0A6J1DSJ8 uncharacterized protein LOC111023918 isoform X1

5.28e-161

100

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD
        MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD

Query:  IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK
        IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLSG
        VVEALLMYDNDTDKAVAHFLSG
Subjt:  VVEALLMYDNDTDKAVAHFLSG

A0A6J1DVL2 uncharacterized protein LOC111023918 isoform X2

2.16e-162

100

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD
        MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRD

Query:  IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK
        IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLSGTS
        VVEALLMYDNDTDKAVAHFLSGTS
Subjt:  VVEALLMYDNDTDKAVAHFLSGTS

A0A6J1H2H7 uncharacterized protein LOC111459499

1.44e-131

82.46

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP
        MAYDYRNKPG+Y++HPPMYGP AS+SPSPS+HPMY  + S+YPRIGQQGHSPAPPVAR+SSHHHSSS    PS PSSSGLGI VTIKPEYRITPPPQLSP
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP

Query:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF
        Q+ DIPRSNFQFDFEFEKKVLAEAEKET NW+RFGL++ P++P E +S+MGS GDPV SKY+ASGL+REAV  AVANYGDNPTKVQEF KGYTLLREMGF
Subjt:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF

Query:  SSNKVVEALLMYDNDTDKAVAHFLSGTS
         SNKVVEALLMYDNDTDKAVAHFL GTS
Subjt:  SSNKVVEALLMYDNDTDKAVAHFLSGTS

A0A6J1K3U0 velvet complex subunit B

2.38e-130

81.58

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP
        MAYDYRNKPG+Y++HPPMYGP AS+SPSPS+HPMY  + S+YPRIGQQGHSPAPPV R+SSHHHSSS    PS PSSSGLGI VTIKPEYRITPPPQLSP
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSS----PSPPSSSGLGIGVTIKPEYRITPPPQLSP

Query:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF
        Q+ DIPRSNFQFDFEFEKKVLAEAEKET NW+RFGL++ P++P E +S+MGS GDPV +KY+ASGL+REAV  AVANYGDNPTKVQEF KGYTLLREMGF
Subjt:  QIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGF

Query:  SSNKVVEALLMYDNDTDKAVAHFLSGTS
         SNKVVEALLMYDNDTDKAVAHFL GTS
Subjt:  SSNKVVEALLMYDNDTDKAVAHFLSGTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G53330.1 Ubiquitin-associated/translation elongation factor EF1B protein

4.5e-65

60.78

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Query:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSL-HPMYGHSMSLYPRIGQQGHSPAP----PVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLS
        M YDYRNK G      PMYGPP S SPSPS  HPMYG     YP+IGQQ   P P    P  R SS  H++SP    SSG+GI V +KPEYRITPPPQL 
Subjt:  MAYDYRNKPGHYDSHPPMYGPPASASPSPSL-HPMYGHSMSLYPRIGQQGHSPAP----PVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLS

Query:  PQIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPT-STMGSLG--DPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLR
        P++ DI RS+FQFDF  E+KVLAEAEK+  +WS+FG +N PAK  EP+ S++G +   D V  KY ASGLNREAV  AVANYGDNPTKVQEFA G+T +R
Subjt:  PQIRDIPRSNFQFDFEFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPT-STMGSLG--DPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLR

Query:  EMGFSSNKVVEALLMYDNDTDKAVAHFLSGTS
        EMGF +N V +AL M++NDTDKA+AH L G+S
Subjt:  EMGFSSNKVVEALLMYDNDTDKAVAHFLSGTS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTACGATTACAGAAACAAGCCCGGCCACTACGATTCTCACCCGCCGATGTACGGCCCGCCGGCTTCCGCCTCCCCATCGCCGTCGCTTCATCCAATGTATGGTCA
CTCTATGTCTTTGTATCCGAGGATCGGTCAACAAGGTCATTCGCCGGCGCCTCCGGTGGCCCGAATCTCCTCCCACCACCATTCTTCTTCTCCTTCACCTCCATCTTCTT
CAGGATTGGGCATCGGGGTTACAATCAAGCCGGAATATCGAATTACTCCGCCGCCTCAATTATCGCCACAAATTAGAGATATTCCTCGGAGCAATTTCCAATTTGATTTT
GAGTTTGAGAAGAAGGTTTTAGCTGAAGCAGAGAAAGAAACACAGAATTGGAGTCGGTTTGGGTTGGACAATCTTCCTGCTAAACCAGGAGAACCGACATCTACAATGGG
CTCTCTTGGAGATCCAGTTGCGAGCAAGTATATTGCATCTGGCTTGAATCGGGAAGCTGTACGGTTTGCAGTTGCTAATTATGGAGACAATCCAACCAAGGTTCAAGAAT
TCGCGAAAGGCTACACACTCCTACGAGAAATGGGATTCTCATCGAATAAGGTGGTCGAGGCATTACTCATGTACGACAACGATACCGATAAGGCTGTAGCTCATTTTCTC
AGCGGTACGTCT

mRNA sequence

Show/hide mRNA sequence

AAAATTAAGTAGAAGAATTTCGCAGCGAGGAAGGATATTATTATATCAATTATAAAATGATTATTTCCAAGTATTTTCATAAAAGTTGAAGTCCTTTATTGCACAAGCAT
TCGATTTTCTTCCCCTCTGCTTCTTCTTCTGTTCTCCGATGGCTTACGATTACAGAAACAAGCCCGGCCACTACGATTCTCACCCGCCGATGTACGGCCCGCCGGCTTCC
GCCTCCCCATCGCCGTCGCTTCATCCAATGTATGGTCACTCTATGTCTTTGTATCCGAGGATCGGTCAACAAGGTCATTCGCCGGCGCCTCCGGTGGCCCGAATCTCCTC
CCACCACCATTCTTCTTCTCCTTCACCTCCATCTTCTTCAGGATTGGGCATCGGGGTTACAATCAAGCCGGAATATCGAATTACTCCGCCGCCTCAATTATCGCCACAAA
TTAGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAGAAGGTTTTAGCTGAAGCAGAGAAAGAAACACAGAATTGGAGTCGGTTTGGGTTGGACAAT
CTTCCTGCTAAACCAGGAGAACCGACATCTACAATGGGCTCTCTTGGAGATCCAGTTGCGAGCAAGTATATTGCATCTGGCTTGAATCGGGAAGCTGTACGGTTTGCAGT
TGCTAATTATGGAGACAATCCAACCAAGGTTCAAGAATTCGCGAAAGGCTACACACTCCTACGAGAAATGGGATTCTCATCGAATAAGGTGGTCGAGGCATTACTCATGT
ACGACAACGATACCGATAAGGCTGTAGCTCATTTTCTCAGCGGTACGTCT

Protein sequence

Show/hide protein sequence

MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARISSHHHSSSPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRDIPRSNFQFDF
EFEKKVLAEAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNPTKVQEFAKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFL
SGTS

MC06g1405 (gene) of Bitter gourd (Dali-11) v1 genome