CuGenDBv2

Gene ID	MC06g1439
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ATP synthase subunit beta, chloroplastic
Genome location	MC06:21683009..21683278
RNA-Seq Expression	MC06g1439
Synteny	MC06g1439
Gene Ontology terms	GO:0046034 - ATP metabolic process (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0009507 - chloroplast (cellular component) GO:0031090 - organelle membrane (cellular component) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AOO76916.1 ATP synthase beta subunit, partial [Trichosanthes laceribractea]

2.09e-45

76.92

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDSR--------------IFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNAL+V GQ+TAGQEINVTCEVQQLLGNNRVR VAM+ATDGLMRGM+VID+R              IFNVLG PIDNLGPVDTRTTSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDSR--------------IFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

KAB2097470.1 hypothetical protein ES319_A01G172700v1 [Gossypium barbadense]

1.43e-45

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV GQ+TAGQ+INVTCEVQQLLGNNRVR VAM+ATDGL RGM+VID+              RIFNVLG P+DNLGPVDTRTTSPIH+S PTF
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

MBN8156799.1 F0F1 ATP synthase subunit beta [Vibrio vulnificus]

1.24e-44

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV GQ+TAGQ+INVTCEVQQLLGNNRVR VAM+ATDGLMRGM+VID+              RIFNVLG P+D LGPVDTRTTSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

QBA29160.1 ATP synthase beta subunit, partial [Corylopsis platypetala]

1.97e-44

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV GQ+T GQ+INVTCEVQQLLGNNRVR VAM+ATDGLMRGM+VID+              RIFNVLG P+DNLGPVDTRTTSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

RYR54840.1 hypothetical protein Ahy_A06g030104 isoform B [Arachis hypogaea]

1.98e-44

74.04

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV G++  GQ+INVTCEVQQLLGNNRVR VAM+ATDGLMRGM+VID+              RIFNVLG PIDNLGPVDTRTTSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

TrEMBL top hits

e value

%identity

Alignment

A0A1C9HCF5 ATP synthase beta subunit (Fragment)

1.01e-45

76.92

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDSR--------------IFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNAL+V GQ+TAGQEINVTCEVQQLLGNNRVR VAM+ATDGLMRGM+VID+R              IFNVLG PIDNLGPVDTRTTSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDSR--------------IFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

A0A5D2HMW1 ATP-synt_ab_N domain-containing protein

6.90e-46

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV GQ+TAGQ+INVTCEVQQLLGNNRVR VAM+ATDGL RGM+VID+              RIFNVLG P+DNLGPVDTRTTSPIH+S PTF
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

A0A5J5WYH1 ATP-synt_ab_N domain-containing protein

6.90e-46

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV GQ+TAGQ+INVTCEVQQLLGNNRVR VAM+ATDGL RGM+VID+              RIFNVLG P+DNLGPVDTRTTSPIH+S PTF
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

A0A6B7F9V9 ATP synthase beta subunit (Fragment)

9.54e-45

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV GQ+T GQ+INVTCEVQQLLGNNRVR VAM+ATDGLMRGM+VID+              RIFNVLG P+DNLGPVDTRTTSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

A0A6B7FB15 ATP synthase beta subunit (Fragment)

9.54e-45

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV GQ+T GQ+INVTCEVQQLLGNNRVR VAM+ATDGLMRGM+VID+              RIFNVLG P+DNLGPVDTRTTSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

SwissProt top hits

e value

%identity

Alignment

A4QJU0 ATP synthase subunit beta, chloroplastic

5.5e-35

72.12

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVID--------------SRIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV G++T GQEINVTCEVQQLLGNNRVR VAM+AT+GL RGMDV+D               RIFNVLG P+DNLGPVDTRTTSPIH+S P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVID--------------SRIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

A4QKB2 ATP synthase subunit beta, chloroplastic

5.5e-35

72.12

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVID--------------SRIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV G++T GQEINVTCEVQQLLGNNRVR VAM+AT+GL RGMDV+D               RIFNVLG P+DNLGPVDTRTTSPIH+S P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVID--------------SRIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

B1NWF7 ATP synthase subunit beta, chloroplastic

5.5e-35

73.08

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV G++TAGQEINVTCEVQQLLGNNRVR VAM+ATDGL RGM+VID+              RIFNVLG P+D+LGPVDTR TSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

P80658 ATP synthase subunit beta, chloroplastic

7.2e-35

71.15

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYN+L+V GQNTAGQEINVTCEVQQLLGNN+VR VAM+ATDGLMRGMDV+D+              RIFNVLG P+DNLGPVD  TT PIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
         QLD
Subjt:  IQLD

Q70XZ6 ATP synthase subunit beta, chloroplastic

3.8e-36

74.04

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYN+LVV G++TAGQ+INVTCEVQQLLGNNRVR VAM+ATDGLMRGM+VID+              RIFNVLG P+DNLGPVDTRTTSPIHRS P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        IQLD
Subjt:  IQLD

Arabidopsis top hits

e value

%identity

Alignment

AT5G08670.1 ATP synthase alpha/beta family protein

6.9e-09

35.92

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        +P I  +L V    T      +  EV   LG N VR +AM  T+GL+RG  V+++              RI NVLG PID  G + T    PIHR  P  
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQL
        + L
Subjt:  IQL

AT5G08680.1 ATP synthase alpha/beta family protein

6.9e-09

35.92

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        +P I  +L V    T      +  EV   LG N VR +AM  T+GL+RG  V+++              RI NVLG PID  G + T    PIHR  P  
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQL
        + L
Subjt:  IQL

AT5G08690.1 ATP synthase alpha/beta family protein

6.9e-09

35.92

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        +P I  +L V    T      +  EV   LG N VR +AM  T+GL+RG  V+++              RI NVLG PID  G + T    PIHR  P  
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDS--------------RIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQL
        + L
Subjt:  IQL

ATCG00480.1 ATP synthase subunit beta

8.7e-36

71.15

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Query:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVID--------------SRIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF
        MPNIYNALVV G++T GQEINVTCEVQQLLGNNRVR VAM+AT+GL RGMDV+D               RIFNVLG P+DNLGPVDTRTTSPIH+S P F
Subjt:  MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVID--------------SRIFNVLGVPIDNLGPVDTRTTSPIHRSVPTF

Query:  IQLD
        I+LD
Subjt:  IQLD

Sequences

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CDS sequence

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ATGCCTAATATTTACAACGCTTTGGTAGTTAATGGTCAAAATACTGCCGGTCAAGAAATTAATGTGACTTGTGAAGTACAACAATTATTAGGAAATAATCGAGTTAGAGT
TGTAGCTATGACTGCTACAGATGGTCTAATGAGAGGAATGGACGTGATTGACAGCCGAATTTTCAATGTGCTTGGAGTGCCTATTGATAATTTGGGTCCTGTAGATACTC
GCACAACATCTCCTATTCATAGATCCGTCCCTACTTTTATACAGTTAGAT

mRNA sequence

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Protein sequence

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MPNIYNALVVNGQNTAGQEINVTCEVQQLLGNNRVRVVAMTATDGLMRGMDVIDSRIFNVLGVPIDNLGPVDTRTTSPIHRSVPTFIQLD

MC06g1439 (gene) of Bitter gourd (Dali-11) v1 genome