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MC06g1457 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1457
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMyb family transcription factor
Genome locationMC06:21903909..21904391
RNA-Seq ExpressionMC06g1457
SyntenyMC06g1457
Gene Ontology termsGO:0009913 - epidermal cell differentiation (biological process)
GO:0010063 - positive regulation of trichoblast fate specification (biological process)
GO:0010376 - stomatal complex formation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3960445.1 hypothetical protein CMV_014845 [Castanea mollissima]9.23e-2554.65Show/hide
Query:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
        M+K+P+KQ+K+R+S SE  V              +EW  I+++EQEEDLICRM++LVGDRWDLIAGR+PGR   EIERFWI++H  
Subjt:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS

XP_022146038.1 transcription factor CPC-like isoform X2 [Momordica charantia]6.39e-4281.72Show/hide
Query:  MEDEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
        MEDEAKKMEKQPQKQSKSRNSSSE    L             EWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
Subjt:  MEDEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS

XP_023912293.1 transcription factor CPC-like isoform X1 [Quercus suber]4.68e-2554.65Show/hide
Query:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
        M+K+P+KQ+K+R+S+SE  V              +EW  I+++EQEEDLICRM++LVGDRWDLIAGRIPGR   +IERFWI++H  
Subjt:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS

XP_030951906.1 transcription factor CPC-like isoform X1 [Quercus lobata]1.90e-2454.65Show/hide
Query:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
        M+K+P+KQ+K+R S+SE  V              +EW  I+++EQEEDLICRM++LVGDRWDLIAGRIPGR   +IERFWI++H  
Subjt:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS

XP_038874276.1 transcription factor CPC-like [Benincasa hispida]3.67e-3268.82Show/hide
Query:  MEDEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
        ME EAKK  KQPQKQSK R S+SE    L             EW++IQIS+QEEDLI RMH+LVGDRWDLIAGRIPGRTAVEIERFWILKH S
Subjt:  MEDEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS

TrEMBL top hitse value%identityAlignment
A0A061G715 Homeodomain-like superfamily protein6.00e-2352.33Show/hide
Query:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
        M+++PQKQ+K   S+SE                 +EW+ I+++EQEEDL+ R+++LVGDRWDLIAGRIPGRTA EIERFWI++H  
Subjt:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS

A0A2I4E811 transcription factor CPC-like4.23e-2353.49Show/hide
Query:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
        M+K+P+KQ+KS  SS+   V              +EW+ I+++EQEEDLI RM+KLVGDRWDLIAGR+PGR   EIERFWI++H  
Subjt:  MEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS

A0A654F2G6 SANT domain-containing protein7.29e-2351.69Show/hide
Query:  DEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        D+A+KM+K+ ++QSK++ S SE                 +EW+ +++SE+EEDLI RM+KLVGDRW+LIAGRIPGRT  EIER+W++KH
Subjt:  DEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

A0A6J1CXI2 transcription factor CPC-like isoform X23.09e-4281.72Show/hide
Query:  MEDEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
        MEDEAKKMEKQPQKQSKSRNSSSE    L             EWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS
Subjt:  MEDEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS

D7M4Z5 Myb family transcription factor9.70e-2361.43Show/hide
Query:  SSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILK
        SSSEGT               LEW+++ +S++EEDL+CRMHKLVGDRW+LIAGRIPGRTA EIERFW++K
Subjt:  SSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILK

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL21.5e-1464Show/hide
Query:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        ++W+ I ++EQEEDLI RMH+LVGDRWDLIAGR+ GR A +IER+WI+++
Subjt:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

O22059 Transcription factor CPC2.6e-1951.69Show/hide
Query:  DEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        D+A+KM+K+ ++QSK++ S SE                 +EW+ +++SE+EEDLI RM+KLVGDRW+LIAGRIPGRT  EIER+W++KH
Subjt:  DEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

Q8GV05 Transcription factor TRY2.2e-1564.71Show/hide
Query:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHA
        +EW+ I ++EQEEDLI RM++LVGDRWDLIAGR+PGR   EIER+WI++++
Subjt:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHA

Q9LNI5 MYB-like transcription factor ETC11.8e-1774Show/hide
Query:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        LEW+ I ++++EEDLICRM+KLVG+RWDLIAGRIPGRTA EIERFW++K+
Subjt:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

Q9M157 MYB-like transcription factor ETC34.1e-1752.44Show/hide
Query:  KQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        KQP+  S   +SS E                 LEW+++ +S++EEDL+ RMHKLVGDRW+LIAGRIPGRTA EIERFW++K+
Subjt:  KQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

Arabidopsis top hitse value%identityAlignment
AT1G01380.1 Homeodomain-like superfamily protein1.3e-1874Show/hide
Query:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        LEW+ I ++++EEDLICRM+KLVG+RWDLIAGRIPGRTA EIERFW++K+
Subjt:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

AT2G46410.1 Homeodomain-like superfamily protein1.8e-2051.69Show/hide
Query:  DEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        D+A+KM+K+ ++QSK++ S SE                 +EW+ +++SE+EEDLI RM+KLVGDRW+LIAGRIPGRT  EIER+W++KH
Subjt:  DEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

AT4G01060.1 CAPRICE-like MYB32.6e-1956.1Show/hide
Query:  KQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        KQP K +    SSSEGT               LEW+++ +S++EEDL+ RMHKLVGDRW+LIAGRIPGRTA EIERFW++K+
Subjt:  KQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

AT4G01060.2 CAPRICE-like MYB31.0e-1872Show/hide
Query:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        LEW+++ +S++EEDL+ RMHKLVGDRW+LIAGRIPGRTA EIERFW++K+
Subjt:  LEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH

AT4G01060.3 CAPRICE-like MYB32.9e-1852.44Show/hide
Query:  KQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH
        KQP+  S   +SS E                 LEW+++ +S++EEDL+ RMHKLVGDRW+LIAGRIPGRTA EIERFW++K+
Subjt:  KQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAAGCTAAGAAGATGGAGAAACAGCCACAGAAACAGTCTAAGAGCAGGAATTCGAGCTCGGAAGGTACGGTTTTTCTGGTTTTGCTGCCATGGCTACTGAA
AAGTTTTGGCTGTTTGGAGTGGAAACTCATTCAAATCAGTGAACAGGAGGAGGATCTCATATGTAGAATGCACAAGCTTGTTGGAGACAGGTGGGATTTGATCGCTGGAC
GAATTCCGGGACGTACCGCAGTGGAAATTGAGAGGTTTTGGATCTTGAAACATGCTTCC
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGAAGCTAAGAAGATGGAGAAACAGCCACAGAAACAGTCTAAGAGCAGGAATTCGAGCTCGGAAGGTACGGTTTTTCTGGTTTTGCTGCCATGGCTACTGAA
AAGTTTTGGCTGTTTGGAGTGGAAACTCATTCAAATCAGTGAACAGGAGGAGGATCTCATATGTAGAATGCACAAGCTTGTTGGAGACAGGTGGGATTTGATCGCTGGAC
GAATTCCGGGACGTACCGCAGTGGAAATTGAGAGGTTTTGGATCTTGAAACATGCTTCC
Protein sequenceShow/hide protein sequence
MEDEAKKMEKQPQKQSKSRNSSSEGTVFLVLLPWLLKSFGCLEWKLIQISEQEEDLICRMHKLVGDRWDLIAGRIPGRTAVEIERFWILKHAS