; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g1486 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1486
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L24
Genome locationMC06:22173311..22178431
RNA-Seq ExpressionMC06g1486
SyntenyMC06g1486
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR003256 - Ribosomal protein L24
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_007050544.1 PREDICTED: 50S ribosomal protein L24 [Theobroma cacao]3.35e-10794.34Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWK+LRGDNVMIIRGKDKGETG+IKRVIRSQNRVIVEGKNLVKKHIKQG GHEGGIFTVEAPLH SNVQVVDP TGKPCKVG+RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        +KVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMD+VLEKTYD+KTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

XP_022146016.1 uncharacterized protein LOC111015327 [Momordica charantia]2.56e-111100Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

XP_022931187.1 uncharacterized protein LOC111437445 [Cucurbita moschata]1.22e-10997.48Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVG+RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEK+YDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

XP_028774016.1 uncharacterized protein LOC114731056 [Prosopis alba]2.36e-10794.34Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWK+LRGDNVMIIRGKDKGETG+IKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAP+H SNVQVVDP TGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        +KVRVSRG+GASGSIIPRPEILKIRTTPRPTVAGPKDTPMD+VLEKTYDAKTG+GMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

XP_038889029.1 50S ribosomal protein L24 [Benincasa hispida]5.79e-10896.86Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDP TGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPR EILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMP+L
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

TrEMBL top hitse value%identityAlignment
A0A061DRL4 KOW domain-containing protein1.62e-10794.34Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWK+LRGDNVMIIRGKDKGETG+IKRVIRSQNRVIVEGKNLVKKHIKQG GHEGGIFTVEAPLH SNVQVVDP TGKPCKVG+RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        +KVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMD+VLEKTYD+KTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

A0A6J1CYB5 uncharacterized protein LOC1110153271.24e-111100Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

A0A6J1EXQ8 uncharacterized protein LOC1114374455.89e-11097.48Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVG+RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEK+YDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

A0A6J1K0T3 uncharacterized protein LOC1114913635.89e-11097.48Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVG+RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEK+YDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

A0A7J6GLF8 KOW domain-containing protein3.28e-10792.45Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHW+ILRGDNVM+IRGKDKGETG++KRV+RSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVGI+YLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        +KVRVSRG+GASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVV+EKTYDAKTG+GMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

SwissProt top hitse value%identityAlignment
A8F2D6 50S ribosomal protein L245.0e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G NLVKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

C3PP96 50S ribosomal protein L245.0e-2351.46Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G N+VKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

Q4UMR8 50S ribosomal protein L242.9e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G NLVKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

Q92GX7 50S ribosomal protein L245.0e-2351.46Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G N+VKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

Q9ZCR6 50S ribosomal protein L243.8e-2351.46Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V+II GK KG+ G + +V   +N V+V G NLVKKH K  +  EGGI T E+P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

Arabidopsis top hitse value%identityAlignment
AT5G23535.1 KOW domain-containing protein3.0e-7987.42Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG IKRVIRSQNRVIVEGKNL+KKHIK G  HEGGIFTVEAPLH SNVQVVDP TG+PCKVG++YLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        +KVRV+RG G SGSIIPRPEILKIR TPRPT AGPKDTPM+ V E+TYDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

AT5G54600.1 Translation protein SH3-like family protein1.8e-1234.58Show/hide
Query:  GDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASGSII
        GD V +I G+DKG+ G + ++    + ++++  NL  KH+K + +G  G I  +EAP+H SNV +         +VG + LEDG KVR     G     I
Subjt:  GDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASGSII

Query:  PRPEILK
         + ++LK
Subjt:  PRPEILK

AT5G54600.2 Translation protein SH3-like family protein2.6e-0629.25Show/hide
Query:  GDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASGSIIP
        GD V +I G+DKG+ G + ++    + +                   G I  +EAP+H SNV +         +VG + LEDG KVR     G     I 
Subjt:  GDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIGASGSIIP

Query:  RPEILK
        + ++LK
Subjt:  RPEILK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGAAGGCTGCTGAAAAGCTGATTAGGCATTGGAAAATTCTTAGAGGAGATAATGTGATGATTATCAGAGGCAAGGATAAAGGAGAAACTGGTTTAATCAAGCG
TGTCATTCGCTCTCAAAATCGTGTCATTGTCGAGGGTAAAAACCTGGTGAAGAAACACATTAAGCAAGGACAGGGCCATGAAGGTGGAATCTTTACAGTTGAAGCCCCCC
TACACGTATCAAATGTTCAAGTTGTTGATCCAGCAACAGGGAAGCCTTGTAAGGTTGGTATCAGATATCTTGAAGATGGTTCTAAAGTACGGGTATCAAGAGGAATTGGA
GCCTCGGGATCCATAATTCCTCGTCCAGAGATCTTAAAGATAAGGACTACTCCCAGACCTACAGTTGCTGGTCCCAAGGATACTCCAATGGATGTGGTGCTGGAGAAAAC
TTATGATGCTAAAACAGGGAAGGGCATGCCTGACCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTGCGATTGATTAAGCAAAGGTTTCAACTGGAAGCTTCAACCGGAAGAACAGAGGCTCGGCTGTAGGACTCAGGAGGACGAAAGAGACGAGCACAGCACTGTAG
CTCAATATTGGCAGCAATAGCTCTGGTATTAGCATTTCTGTTAAATGGGTTGGAAGGCTGCTGAAAAGCTGATTAGGCATTGGAAAATTCTTAGAGGAGATAATGTGATG
ATTATCAGAGGCAAGGATAAAGGAGAAACTGGTTTAATCAAGCGTGTCATTCGCTCTCAAAATCGTGTCATTGTCGAGGGTAAAAACCTGGTGAAGAAACACATTAAGCA
AGGACAGGGCCATGAAGGTGGAATCTTTACAGTTGAAGCCCCCCTACACGTATCAAATGTTCAAGTTGTTGATCCAGCAACAGGGAAGCCTTGTAAGGTTGGTATCAGAT
ATCTTGAAGATGGTTCTAAAGTACGGGTATCAAGAGGAATTGGAGCCTCGGGATCCATAATTCCTCGTCCAGAGATCTTAAAGATAAGGACTACTCCCAGACCTACAGTT
GCTGGTCCCAAGGATACTCCAATGGATGTGGTGCTGGAGAAAACTTATGATGCTAAAACAGGGAAGGGCATGCCTGACCTTTAAAAGTTGCTTCTATCCAATTCCGAAGA
CATGGTTCTACTAGGACGAGGACGACTGCGAATCACATGAAGCTTTATGACACAACATGATTTTCTACTCAACCCCACGTGAAACTGAAAAGTAGTATATCTAAGCCTCA
AAACTTTTTGGTTTATAGTTTTGTCGATATACTTCCATATGCTTAGGGAGTTCATTTTGTCATTGGCAAAATCACTTCTTTTTCCATTAATCATTTTGGTAATATAAGCA
Protein sequenceShow/hide protein sequence
MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPATGKPCKVGIRYLEDGSKVRVSRGIG
ASGSIIPRPEILKIRTTPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL