; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g1561 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1561
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionnuclear transcription factor Y subunit B-4-like
Genome locationMC06:22841288..22841641
RNA-Seq ExpressionMC06g1561
SyntenyMC06g1561
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590402.1 Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subsp. sororia]4.74e-4577.42Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTM
        ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTM

XP_022145916.1 nuclear transcription factor Y subunit B-4-like [Momordica charantia]6.01e-79100Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
        EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC

Query:  GFQQQGEHNNHDDNGDDD
        GFQQQGEHNNHDDNGDDD
Subjt:  GFQQQGEHNNHDDNGDDD

XP_022961414.1 nuclear transcription factor Y subunit B-4-like [Cucurbita moschata]4.19e-4577.42Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTM
        ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTM

XP_022968852.1 nuclear transcription factor Y subunit B-4-like [Cucurbita maxima]3.21e-4570.37Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
        ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +    K  
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC

Query:  GFQQQGEH
          ++Q EH
Subjt:  GFQQQGEH

XP_038880507.1 nuclear transcription factor Y subunit B-4-like [Benincasa hispida]3.18e-4667.83Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
        E LQLP ANVGR+MKKI+PQ +KISKEAK+TMQECA+EFISFV SEAAEKC++ENRRTLNG+DI WA G+ GLDNYA+ +AKYLL +R+A+ +K  NK  
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC

Query:  GFQ---QQGEHNNHD
         FQ   QQGE +++D
Subjt:  GFQ---QQGEHNNHD

TrEMBL top hitse value%identityAlignment
A0A0A0LW12 CBFD_NFYB_HMF domain-containing protein6.84e-4567.29Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
        E L+LP ANV R+MKKIIPQ  KISKEAK+ MQECA EFISFVTSEAA++C  ENRRTLNG+DIYWAFG+LGLDNYA+A++K+LLN+R+ + +K+  KH 
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC

Query:  GFQQQGE
             GE
Subjt:  GFQQQGE

A0A5D3CFV4 Beta-galactosidase 15-like2.21e-4470.87Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
        E LQLP ANV R+MKKIIPQ  KISKEAK+TMQECA EFISFVTSEAA+KC+ ENRRTLNG+DIYWAFG+LGLDNYA+A++  LL +R+A+ +K  +K  
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC

Query:  GFQ
         FQ
Subjt:  GFQ

A0A6J1CXT8 nuclear transcription factor Y subunit B-4-like2.91e-79100Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
        EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC

Query:  GFQQQGEHNNHDDNGDDD
        GFQQQGEHNNHDDNGDDD
Subjt:  GFQQQGEHNNHDDNGDDD

A0A6J1HDY6 nuclear transcription factor Y subunit B-4-like2.03e-4577.42Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTM
        ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTM

A0A6J1HUN8 nuclear transcription factor Y subunit B-4-like1.55e-4570.37Show/hide
Query:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC
        ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +    K  
Subjt:  EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHC

Query:  GFQQQGEH
          ++Q EH
Subjt:  GFQQQGEH

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-41.6e-2960.18Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQ
        LP ANVGRLMK+I+P  +KISKEAKQT+QECATEFISFVT EA+EKC+RENR+T+NG+DI+WA   LGLDNYADA  ++L  YR+A+  +  HNK  G  
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQ

Query:  QQGEHNNHDDNGD
          G     +   D
Subjt:  QQGEHNNHDDNGD

O23310 Nuclear transcription factor Y subunit B-31.1e-2252.22Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        LP ANV R+MKK +P  +KISK+AK+T+QEC +EFISF+T EA++KC RE R+T+NG+D+ WA   LG ++Y +    YL  YR+ +  K
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK

O82248 Nuclear transcription factor Y subunit B-52.0e-2461.9Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYR
        LP ANVGR+MK I+P  +K+SKEAK+TMQEC +EFISFVT EA++KC++E R+T+NG+DI WA   LG D+YA    KYL  YR
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYR

Q67XJ2 Nuclear transcription factor Y subunit B-104.8e-2354.02Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQ
        LP AN+ R+MK+ +P   KI+K+AK+TMQEC +EFISFVTSEA++KC RE R+T+NG+D+ WA   LG ++Y D    YL+ YR+ +
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQ

Q9SIT9 Nuclear transcription factor Y subunit B-71.2e-2449.56Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN-------
        LP ANVGR+MKK++P   KISK+AK+T+QEC +EFISFVT EA++KC RE R+T+NG+DI WA   LG ++Y      YL  YRD +  K+++       
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN-------

Query:  -KHCGFQQQGEHN
         +    QQQ  HN
Subjt:  -KHCGFQQQGEHN

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B41.1e-3060.18Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQ
        LP ANVGRLMK+I+P  +KISKEAKQT+QECATEFISFVT EA+EKC+RENR+T+NG+DI+WA   LGLDNYADA  ++L  YR+A+  +  HNK  G  
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQ

Query:  QQGEHNNHDDNGD
          G     +   D
Subjt:  QQGEHNNHDDNGD

AT2G13570.1 nuclear factor Y, subunit B78.2e-2649.56Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN-------
        LP ANVGR+MKK++P   KISK+AK+T+QEC +EFISFVT EA++KC RE R+T+NG+DI WA   LG ++Y      YL  YRD +  K+++       
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHN-------

Query:  -KHCGFQQQGEHN
         +    QQQ  HN
Subjt:  -KHCGFQQQGEHN

AT2G47810.1 nuclear factor Y, subunit B51.4e-2561.9Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYR
        LP ANVGR+MK I+P  +K+SKEAK+TMQEC +EFISFVT EA++KC++E R+T+NG+DI WA   LG D+YA    KYL  YR
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYR

AT3G53340.1 nuclear factor Y, subunit B103.4e-2454.02Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQ
        LP AN+ R+MK+ +P   KI+K+AK+TMQEC +EFISFVTSEA++KC RE R+T+NG+D+ WA   LG ++Y D    YL+ YR+ +
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQ

AT4G14540.1 nuclear factor Y, subunit B37.7e-2452.22Show/hide
Query:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK
        LP ANV R+MKK +P  +KISK+AK+T+QEC +EFISF+T EA++KC RE R+T+NG+D+ WA   LG ++Y +    YL  YR+ +  K
Subjt:  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAAAGCTTCAGCTGCCAAGTGCTAACGTTGGAAGATTGATGAAGAAGATAATTCCTCAAACGTCAAAGATTTCTAAAGAAGCCAAACAGACAATGCAAGAATGTGCAAC
AGAGTTCATCAGCTTCGTGACAAGTGAAGCTGCAGAAAAGTGTAACAGAGAGAATCGTAGAACTCTCAACGGAGAAGACATTTATTGGGCTTTTGGTGCTCTTGGCTTGG
ATAACTATGCCGACGCTACCGCCAAGTACTTGCTCAACTACAGGGACGCCCAAACAATGAAGATTCATAACAAACATTGTGGATTTCAACAACAAGGAGAACATAACAAC
CATGACGACAACGGTGACGACGAC
mRNA sequenceShow/hide mRNA sequence
GAAAAGCTTCAGCTGCCAAGTGCTAACGTTGGAAGATTGATGAAGAAGATAATTCCTCAAACGTCAAAGATTTCTAAAGAAGCCAAACAGACAATGCAAGAATGTGCAAC
AGAGTTCATCAGCTTCGTGACAAGTGAAGCTGCAGAAAAGTGTAACAGAGAGAATCGTAGAACTCTCAACGGAGAAGACATTTATTGGGCTTTTGGTGCTCTTGGCTTGG
ATAACTATGCCGACGCTACCGCCAAGTACTTGCTCAACTACAGGGACGCCCAAACAATGAAGATTCATAACAAACATTGTGGATTTCAACAACAAGGAGAACATAACAAC
CATGACGACAACGGTGACGACGAC
Protein sequenceShow/hide protein sequence
EKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNN
HDDNGDDD