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MC06g1587 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1587
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC06:23137304..23137671
RNA-Seq ExpressionMC06g1587
SyntenyMC06g1587
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW56512.1 hypothetical protein CK203_072566 [Vitis vinifera]1.09e-0930.65Show/hide
Query:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF
        C L     + + HL  HC  T  +W  L +++GS WV P S +  LV      G+  + K   +V    L+ W  W ERNN +F  K +    +++L  F
Subjt:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF

Query:  HISFWFSIDKEFSNYTPFVTITNW
        + S W S    F      V   NW
Subjt:  HISFWFSIDKEFSNYTPFVTITNW

RVW90344.1 hypothetical protein CK203_045742 [Vitis vinifera]3.15e-0929.84Show/hide
Query:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF
        C L     + + HL  HC  T  +W  L  + G  WV P SL+  LV      G+  + K   ++ A  +++W  W ERNN +F  K +    V++L +F
Subjt:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF

Query:  HISFWFSIDKEFSNYTPFVTITNW
        + S W S  + F      +   NW
Subjt:  HISFWFSIDKEFSNYTPFVTITNW

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]1.22e-0929.84Show/hide
Query:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICG--HHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF
        C L   + +   HL FHC F    W  L       W        N+ Q++ G  H   + + L +   K +L   W ERN+ LF  K + + E F  AKF
Subjt:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICG--HHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF

Query:  HISFWFSIDKEFSNYTPFVTITNW
          S W S+   F +++P +   NW
Subjt:  HISFWFSIDKEFSNYTPFVTITNW

XP_028076616.1 uncharacterized protein LOC114278710 [Camellia sinensis]1.76e-1033.98Show/hide
Query:  HLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICGHHFKNKKKLRVKATKL-ILWSNWLERNNGLFNAKSKYWREVFELAKFHISFWFSIDKEFS
        HL+ HC+F   +W  +    GS WV P SL  +L+    G  +KN  KL  +   L ++WS W+ RNN +FN+K   W  + +  K  ++ W        
Subjt:  HLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICGHHFKNKKKLRVKATKL-ILWSNWLERNNGLFNAKSKYWREVFELAKFHISFWFSIDKEFS

Query:  NYT
        NYT
Subjt:  NYT

XP_028108106.1 uncharacterized protein LOC114306978 [Camellia sinensis]1.37e-0934.34Show/hide
Query:  HCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICGHHFKNKKKLRVKATKL-ILWSNWLERNNGLFNAKSKYWREVFELAKFHISFWFSIDKEFSNYT
        HC+FT  +W  +    GS WV P SL  +L+    G  +KN  KL  +   L ++WS W+ RNN +FN+K   W  + +  K  ++ W        NYT
Subjt:  HCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICGHHFKNKKKLRVKATKL-ILWSNWLERNNGLFNAKSKYWREVFELAKFHISFWFSIDKEFSNYT

TrEMBL top hitse value%identityAlignment
A0A438F981 zf-RVT domain-containing protein5.27e-1030.65Show/hide
Query:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF
        C L     + + HL  HC  T  +W  L +++GS WV P S +  LV      G+  + K   +V    L+ W  W ERNN +F  K +    +++L  F
Subjt:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF

Query:  HISFWFSIDKEFSNYTPFVTITNW
        + S W S    F      V   NW
Subjt:  HISFWFSIDKEFSNYTPFVTITNW

A0A438I0T8 zf-RVT domain-containing protein1.53e-0929.84Show/hide
Query:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF
        C L     + + HL  HC  T  +W  L  + G  WV P SL+  LV      G+  + K   ++ A  +++W  W ERNN +F  K +    V++L +F
Subjt:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF

Query:  HISFWFSIDKEFSNYTPFVTITNW
        + S W S  + F      +   NW
Subjt:  HISFWFSIDKEFSNYTPFVTITNW

A0A438K969 Putative ribonuclease H protein1.59e-0931.45Show/hide
Query:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF
        C L     + + HL  HC  T  +W  L  + G  WV P SL+  LV      G+  + K   ++    LI W  W ERNN +F  K +    V++L +F
Subjt:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF

Query:  HISFWFSIDKEFSNYTPFVTITNW
        + S W S  K F      +   NW
Subjt:  HISFWFSIDKEFSNYTPFVTITNW

A0A438KG54 Protein RETICULATA, chloroplastic1.75e-0930.65Show/hide
Query:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF
        C L     + + HL  HC  T  +W  L  + G SWV P S++  LV      G+  + K   ++    LI W  W ERNN +F  K +    V++L +F
Subjt:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMI--CGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF

Query:  HISFWFSIDKEFSNYTPFVTITNW
        + S W S  + F      +   NW
Subjt:  HISFWFSIDKEFSNYTPFVTITNW

A0A6J1DIE2 uncharacterized protein LOC1110207655.92e-1029.84Show/hide
Query:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICG--HHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF
        C L   + +   HL FHC F    W  L       W        N+ Q++ G  H   + + L +   K +L   W ERN+ LF  K + + E F  AKF
Subjt:  CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICG--HHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKF

Query:  HISFWFSIDKEFSNYTPFVTITNW
          S W S+   F +++P +   NW
Subjt:  HISFWFSIDKEFSNYTPFVTITNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein2.6e-0632Show/hide
Query:  MHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAK
        +HH++F+C +T+++W S + I G+ W  P S + NL ++I     +    L       I+W  W  RN  LF  K
Subjt:  MHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTCTCTTTATTTGAATGCATCTAAAGGAATGCACCATCTCGTTTTCCATTGCTCCTTTACTAAGAATATTTGGGTTTCTCTTTCACAAATTTCTGGATCATCTTGGGT
TCATCCTCATTCTTTGGACGGAAATCTGGTTCAAATGATATGCGGACACCATTTTAAGAATAAAAAGAAACTTCGGGTCAAAGCCACTAAGTTGATACTTTGGAGTAATT
GGTTGGAAAGAAATAATGGACTTTTCAATGCGAAAAGTAAATATTGGAGGGAGGTTTTTGAGTTAGCAAAGTTCCATATATCTTTTTGGTTTTCTATTGATAAAGAGTTT
AGTAATTATACTCCCTTTGTAACAATCACAAATTGG
mRNA sequenceShow/hide mRNA sequence
TGTTCTCTTTATTTGAATGCATCTAAAGGAATGCACCATCTCGTTTTCCATTGCTCCTTTACTAAGAATATTTGGGTTTCTCTTTCACAAATTTCTGGATCATCTTGGGT
TCATCCTCATTCTTTGGACGGAAATCTGGTTCAAATGATATGCGGACACCATTTTAAGAATAAAAAGAAACTTCGGGTCAAAGCCACTAAGTTGATACTTTGGAGTAATT
GGTTGGAAAGAAATAATGGACTTTTCAATGCGAAAAGTAAATATTGGAGGGAGGTTTTTGAGTTAGCAAAGTTCCATATATCTTTTTGGTTTTCTATTGATAAAGAGTTT
AGTAATTATACTCCCTTTGTAACAATCACAAATTGG
Protein sequenceShow/hide protein sequence
CSLYLNASKGMHHLVFHCSFTKNIWVSLSQISGSSWVHPHSLDGNLVQMICGHHFKNKKKLRVKATKLILWSNWLERNNGLFNAKSKYWREVFELAKFHISFWFSIDKEF
SNYTPFVTITNW