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MC06g1624 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1624
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA-directed RNA polymerase II subunit RPB2
Genome locationMC06:23531557..23531822
RNA-Seq ExpressionMC06g1624
SyntenyMC06g1624
Gene Ontology termsGO:0032774 - RNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156252.1 uncharacterized protein LOC111023182 [Momordica charantia]3.92e-29100Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
XP_022931780.1 uncharacterized protein LOC111438056 [Cucurbita moschata]1.25e-2796.3Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSN  SS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
XP_022973256.1 uncharacterized protein LOC111471813 [Cucurbita maxima]1.25e-2796.3Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSN  SS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
XP_023553989.1 uncharacterized protein LOC111811404 [Cucurbita pepo subsp. pepo]2.22e-2898.15Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSS+SDSS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
XP_038888236.1 uncharacterized protein LOC120078095 [Benincasa hispida]1.43e-2796.3Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLI DLRRG+SNSDSS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
TrEMBL top hitse value%identityAlignment
A0A1S4E6G4 uncharacterized protein LOC1035034901.51e-2694.44Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG S SDSS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
A0A5A7TAA3 Putative membrane lipoprotein1.51e-2694.44Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG S SDSS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
A0A6J1DRK3 uncharacterized protein LOC1110231821.90e-29100Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
A0A6J1F0E3 uncharacterized protein LOC1114380566.07e-2896.3Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSN  SS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
A0A6J1I859 uncharacterized protein LOC1114718136.07e-2896.3Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSN  SS
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G17085.1 Putative membrane lipoprotein1.4e-1774.07Show/hide
Query:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS
        M+KSF+LIQT+A +G FSA+S WYGFMFGRESARK+LG LI++LRRG SNSDS+
Subjt:  MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATCGTTCACTCTCATTCAGACAATTGCAACTGCTGGAGCTTTCTCTGCGATTTCATTCTGGTATGGTTTCATGTTTGGAAGAGAGTCCGCTCGAAAAGACTT
GGGAGATTTGATCCAAGATCTACGCCGCGGAAGTTCCAACTCCGATTCTTCT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAATCGTTCACTCTCATTCAGACAATTGCAACTGCTGGAGCTTTCTCTGCGATTTCATTCTGGTATGGTTTCATGTTTGGAAGAGAGTCCGCTCGAAAAGACTT
GGGAGATTTGATCCAAGATCTACGCCGCGGAAGTTCCAACTCCGATTCTTCT
Protein sequenceShow/hide protein sequence
MEKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGSSNSDSS