CuGenDBv2

Gene ID	MC06g1665
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Microspore-specific promoter 2, putative
Genome location	MC06:24101281..24103435
RNA-Seq Expression	MC06g1665
Synteny	MC06g1665
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022159710.1 uncharacterized protein LOC111026052 [Momordica charantia]

1.52e-129

100

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Query:  MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEIS
        MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEIS
Subjt:  MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEIS

Query:  SSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
        SSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
Subjt:  SSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC

XP_022930921.1 uncharacterized protein LOC111437264 [Cucurbita moschata]

3.17e-92

78.5

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Query:  MEDDAKL-SHQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS
        MED AKL  H PQHSSSSS MTL SRLD++D VMKYLE+KQ LER      +C+SLDVALKDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  S
Subjt:  MEDDAKL-SHQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS

Query:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
        T+ S +ISSSS +PKQFCRGEPSSSYP FHYPSHGGTS+ISQ+QEK Q  RH+QKKKQ SP K QLGKTRSG KDEGGSCKNVKKGIPP KW HLRMFGC
Subjt:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC

XP_022996286.1 uncharacterized protein LOC111491560 [Cucurbita maxima]

1.35e-93

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Query:  MEDDAKLS-HQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS
        MED AKL  H PQHSSSSS MTL SRLD++D VMKYLE+KQ LER      +C+SLDVALKDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  S
Subjt:  MEDDAKLS-HQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS

Query:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
        T+ S +ISSSS +PKQFCRGEPSSSYP FHYPSHGGTS+ISQ+QEKPQ  RH+QKKKQ SP K QLGKTRSG KDEGGSCKNVKKGIPP KW HLRMFGC
Subjt:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC

XP_023532991.1 uncharacterized protein LOC111795001 [Cucurbita pepo subsp. pepo]

1.92e-93

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Query:  MEDDAKL-SHQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS
        MED AKL  H PQHSSSSS MTL SRLD++D VMKYLE+KQ LER      +C+SLDVALKDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  S
Subjt:  MEDDAKL-SHQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS

Query:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
        T+ S +ISSSS +PKQFCRGEPSSSYP FHYPSHGGTS+ISQ+QEKPQ  RH+QKKKQ SP K QLGKTRSG KDEGGSCKNVKKGIPP KW HLRMFGC
Subjt:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC

XP_038888525.1 uncharacterized protein LOC120078343 [Benincasa hispida]

3.46e-93

76.21

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Query:  MEDD--AKLSHQPQH--SSSSSMTLLSRLDHLDFVMKYLERKQSL------------ERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSS
        MEDD  AKLSH PQH  SSSSSMTL SRLDHLDFVMK LE+KQ L            E+RC+SLDVALKDTYFKGSLLDRVA LE+RLFQLCL+MDSG+S
Subjt:  MEDD--AKLSHQPQH--SSSSSMTLLSRLDHLDFVMKYLERKQSL------------ERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSS

Query:  TNPSSFTSTEASVEISSSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQ-LGKTRSGSKDEGGSCKNVKKGIPPPKWPH
        +NPSS TS++ SVEI SSSSPKQFCRG+PSSSYPTFHYP+HG TSQISQ+QEKPQR QQKK Q S SKGQ +GKTR+  KDE GSCKNVKKGIP  KWPH
Subjt:  TNPSSFTSTEASVEISSSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQ-LGKTRSGSKDEGGSCKNVKKGIPPPKWPH

Query:  LRMFGC
        LRMFGC
Subjt:  LRMFGC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEC6 Uncharacterized protein

5.56e-75

67.29

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Query:  MEDD--AKLSHQPQH--SSSSSMTLLSRLDHLDFVMKYLERKQSLER-------------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGS
        MEDD   KL   PQ   SSSSSMTL SRLDHLDFVMK LE+KQ LER             R +S+DVALKDTY KGSLLDRVAALEHRL QLCL+M+SGS
Subjt:  MEDD--AKLSHQPQH--SSSSSMTLLSRLDHLDFVMKYLERKQSLER-------------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGS

Query:  STNPSSFTS---TEASVEISSSSSPKQFCRGEPSSS-YPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQL--GKTRSGSKDEGGSCKNVKKGIP
        S+NPSS T+   T +S+EI+SSSSPK+FC G+ SSS YPTFHYP++G TSQ+SQ QEKPQR QQKKKQ S  KGQ+  GKT +  KDE GSCKNVKKG  
Subjt:  STNPSSFTS---TEASVEISSSSSPKQFCRGEPSSS-YPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQL--GKTRSGSKDEGGSCKNVKKGIP

Query:  PP--KWPHLRMFGC
        P   KWPHLRMFGC
Subjt:  PP--KWPHLRMFGC

A0A5D3E4W5 Uncharacterized protein

1.98e-55

70.39

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Query:  RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDS-GSSTNPSSFT-STEASVEI-SSSSSPKQFCRGEPSS--SYPTFHYPSHGGTSQISQVQEKP
        R +S+DVALKDTYFKGSLLDRVAALEHRL QLCL+M+S GSS+NPSS T S++ S+EI +SSSSPK FC G+ SS  SYPTFHYP++G TSQISQ QEKP
Subjt:  RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDS-GSSTNPSSFT-STEASVEI-SSSSSPKQFCRGEPSS--SYPTFHYPSHGGTSQISQVQEKP

Query:  QRHQQKKKQPSPSKGQL--GKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFG
        QR QQKKKQ S  KGQ+   KT +   +E GSCKNVKKG P  KWPHLR+FG
Subjt:  QRHQQKKKQPSPSKGQL--GKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFG

A0A6J1DZI5 uncharacterized protein LOC111026052

7.38e-130

100

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Query:  MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEIS
        MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEIS
Subjt:  MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEIS

Query:  SSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
        SSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
Subjt:  SSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC

A0A6J1ES90 uncharacterized protein LOC111437264

1.54e-92

78.5

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Query:  MEDDAKL-SHQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS
        MED AKL  H PQHSSSSS MTL SRLD++D VMKYLE+KQ LER      +C+SLDVALKDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  S
Subjt:  MEDDAKL-SHQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS

Query:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
        T+ S +ISSSS +PKQFCRGEPSSSYP FHYPSHGGTS+ISQ+QEK Q  RH+QKKKQ SP K QLGKTRSG KDEGGSCKNVKKGIPP KW HLRMFGC
Subjt:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC

A0A6J1K4A8 uncharacterized protein LOC111491560

6.55e-94

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Query:  MEDDAKLS-HQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS
        MED AKL  H PQHSSSSS MTL SRLD++D VMKYLE+KQ LER      +C+SLDVALKDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  S
Subjt:  MEDDAKLS-HQPQHSSSSS-MTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS

Query:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
        T+ S +ISSSS +PKQFCRGEPSSSYP FHYPSHGGTS+ISQ+QEKPQ  RH+QKKKQ SP K QLGKTRSG KDEGGSCKNVKKGIPP KW HLRMFGC
Subjt:  TEASVEISSSS-SPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQ--RHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G46795.1 microspore-specific promoter 2

4.5e-18

37.44

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Query:  QPQHSSSSSMTLLSRLDHLDFVMKYLERKQSL----------ERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEI
        + Q  S SS+ +LSRL+HLDFV+K LER+Q+L           R  +    A+++ YFKGSLLDR+AALE RLFQ+CL+++S S     S TST  S E 
Subjt:  QPQHSSSSSMTLLSRLDHLDFVMKYLERKQSL----------ERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEI

Query:  SSSSSPKQFCRGEP--SSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSK--DEGGSCK-NVKKGIPPPKWPHLRMFGC
        SS    +   +  P  SS+   FH P       + +++EK +  ++K+++ +  K  L K    +K  D   +CK   KK   P KW    + GC
Subjt:  SSSSSPKQFCRGEP--SSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSK--DEGGSCK-NVKKGIPPPKWPHLRMFGC

Sequences

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CDS sequence

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ATGGAAGATGATGCAAAGTTGTCCCATCAGCCACAACATTCCTCCTCTTCCTCCATGACCCTTCTTTCTAGATTGGATCATTTGGATTTTGTTATGAAGTACTTGGAGAG
AAAACAGAGCTTGGAAAGGAGATGCGTATCGTTGGATGTTGCACTAAAAGATACTTACTTTAAAGGTTCATTGTTGGATCGTGTGGCAGCTCTTGAGCATAGACTTTTTC
AGCTATGCTTAAAGATGGATTCAGGAAGCTCCACAAATCCTTCATCATTCACTTCAACAGAAGCATCTGTGGAGATTAGTTCTTCTTCTTCTCCAAAACAGTTTTGCAGA
GGGGAACCTTCTTCTTCATATCCCACATTCCACTACCCAAGCCATGGAGGAACCTCACAAATTTCCCAAGTCCAGGAGAAGCCTCAAAGACATCAACAGAAAAAGAAGCA
ACCCAGTCCTTCAAAAGGGCAACTTGGTAAGACAAGAAGTGGATCAAAGGATGAAGGAGGATCTTGCAAAAATGTGAAGAAAGGGATTCCTCCTCCCAAATGGCCACACT
TGAGGATGTTTGGTTGCTAA

mRNA sequence

Show/hide mRNA sequence

CAAGACACTAAGAGCTCTCATCCAATGGAAGATGATGCAAAGTTGTCCCATCAGCCACAACATTCCTCCTCTTCCTCCATGACCCTTCTTTCTAGATTGGATCATTTGGA
TTTTGTTATGAAGTACTTGGAGAGAAAACAGAGCTTGGAAAGGAGATGCGTATCGTTGGATGTTGCACTAAAAGATACTTACTTTAAAGGTTCATTGTTGGATCGTGTGG
CAGCTCTTGAGCATAGACTTTTTCAGCTATGCTTAAAGATGGATTCAGGAAGCTCCACAAATCCTTCATCATTCACTTCAACAGAAGCATCTGTGGAGATTAGTTCTTCT
TCTTCTCCAAAACAGTTTTGCAGAGGGGAACCTTCTTCTTCATATCCCACATTCCACTACCCAAGCCATGGAGGAACCTCACAAATTTCCCAAGTCCAGGAGAAGCCTCA
AAGACATCAACAGAAAAAGAAGCAACCCAGTCCTTCAAAAGGGCAACTTGGTAAGACAAGAAGTGGATCAAAGGATGAAGGAGGATCTTGCAAAAATGTGAAGAAAGGGA
TTCCTCCTCCCAAATGGCCACACTTGAGGATGTTTGGTTGCTAAAATTCTTGGTTCCTTTTCCTTCCTTCTCACCCTCTTTTTCCAACAAAAATTCACCATCATATGTTT
CAAAAAGTAGGATTTTATAGCTGTTACTGAATATAATTTATGGGCATAAAGTGAGATGCAGAAATTTGGGTAGTGGCATGATTTGTGATCTGTTCTGAAAATGGAAAATA
AAATATTATATAATGTGAAAATGTGAATGATGAATGAGTGCAGGGTGTGGTACTGTGATTATGTCTCATACTGATTTGGGGCCAACTTTGG

Protein sequence

Show/hide protein sequence

MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEISSSSSPKQFCR
GEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC

MC06g1665 (gene) of Bitter gourd (Dali-11) v1 genome