CuGenDBv2

Gene ID	MC06g1678
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Vma12 domain-containing protein
Genome location	MC06:24204376..24206514
RNA-Seq Expression	MC06g1678
Synteny	MC06g1678
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021013 - ATPase, vacuolar ER assembly factor, Vma12

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131249.1 uncharacterized protein LOC111004507 [Momordica charantia]

9.33e-135

99.51

Show/hide

Query:  MMTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKL
        MMTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKL
Subjt:  MMTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKL

Query:  EDIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRS
        EDIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS S
Subjt:  EDIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRS

Query:  KIKKSQ
        KIKKSQ
Subjt:  KIKKSQ

XP_022959366.1 uncharacterized protein LOC111460360 [Cucurbita moschata]

5.79e-113

84.95

Show/hide

Query:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIRSFL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+RSSSS RS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

XP_023006665.1 uncharacterized protein LOC111499322 [Cucurbita maxima]

3.90e-111

83.5

Show/hide

Query:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIR+FL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLK L 
Subjt:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+RSSSS RS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

XP_023548168.1 uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]

8.22e-113

84.47

Show/hide

Query:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIRSFL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS
        D+AERKAYQELVKDIAP+K +DEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+RSSSS RS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

XP_038876067.1 uncharacterized protein LOC120068388 [Benincasa hispida]

9.58e-112

84.95

Show/hide

Query:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND THPSGLV+S TEAIRSFL SAS D +LS++LRQI+SDL+SQ N+PYKPLRAIW A ESS RPDLL LLAGSEFV TSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS
        D+AERKAYQELVKDIAP+K I+EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIRSSNYD+RSSSS  S
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS

Query:  KIKKSQ
        K+KKSQ
Subjt:  KIKKSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7F5 Uncharacterized protein

3.81e-111

85.44

Show/hide

Query:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND   PSGLV+S+TEAIRSFL SAS D +LS++LRQI+SDL SQ N+PYK LRAIW A+ESSTRPDLL LLAGSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIRSSNYD+RSSSS RS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS

Query:  KIKKSQ
        K+KKSQ
Subjt:  KIKKSQ

A0A1S3C6X8 uncharacterized protein LOC103497719

7.67e-111

84.95

Show/hide

Query:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND   PSGLV+S+TEAIRSFL SAS D +LS++LRQI+SDL+SQ N+PYK LRAIW A+ESSTRPDLL LLAGSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIRSSNYD+RSSSS RS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS

Query:  KIKKSQ
        K+KKSQ
Subjt:  KIKKSQ

A0A6J1BP66 uncharacterized protein LOC111004507

4.52e-135

99.51

Show/hide

Query:  MMTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKL
        MMTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKL
Subjt:  MMTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKL

Query:  EDIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRS
        EDIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS S
Subjt:  EDIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRS

Query:  KIKKSQ
        KIKKSQ
Subjt:  KIKKSQ

A0A6J1H4N6 uncharacterized protein LOC111460360

2.80e-113

84.95

Show/hide

Query:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIRSFL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+RSSSS RS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

A0A6J1L0S3 uncharacterized protein LOC111499322

1.89e-111

83.5

Show/hide

Query:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIR+FL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLK L 
Subjt:  MTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+RSSSS RS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS-RS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G52980.1 CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

1.5e-67

68.16

Show/hide

Query:  DRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLEDIA
        D  + SGL++S TE +RSFL  AS D RLS++LR I+SDL S++ +PYK LRAIW  S+ STRPDLL L +GS FVFTSPKPREKSEELK RL KL +IA
Subjt:  DRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLEDIA

Query:  ERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSKIKK
        ERK Y ELVKDI P+K ++EPFSSYKDQLGFGLHV L MFTGYLVGYA FRALF R+P +S AGGILGLV  MLVETLLFII++S  DD+  SS+S  + 
Subjt:  ERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSKIKK

Query:  S
        S
Subjt:  S

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

TCTATGATGACCAACGACCGGACACATCCGTCTGGTCTCGTGATATCTTACACCGAAGCGATTCGCTCATTTCTGAACTCGGCGTCCAAAGATTTGCGACTTTCTGAGCA
ACTCCGGCAGATTTCTTCCGATCTCTCTTCGCAAGATAACGTTCCATATAAGCCGTTAAGAGCTATCTGGGTTGCTTCGGAATCCTCCACCCGGCCGGACTTACTCTGTC
TTTTAGCCGGATCGGAGTTCGTCTTTACAAGCCCCAAACCGAGGGAGAAGAGCGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGAGGATATAGCAGAGAGGAAGGCCTAT
CAGGAGCTGGTGAAGGATATCGCACCTAGGAAAACAATTGATGAGCCTTTCTCTTCATACAAGGATCAGTTGGGATTCGGTTTACATGTTGTGTTGATAATGTTTACTGG
ATACCTGGTCGGCTATGCTTTGTTCCGAGCATTGTTTAGACGCGATCCAGTCATGAGTGTTGCTGGAGGTATCCTTGGATTGGTTTTTGGCATGCTCGTAGAAACACTTC
TTTTCATTATTAGATCGTCCAATTATGATGACCGGTCTTCATCTTCCCGTTCCAAGATAAAGAAGAGTCAATAGCGTTACTTCTCTCAAGGTTTGCCTTTATCTCAACAT
AAATTGAACCATGGCATTCTTGCCTGGATTTGAATATAACCTATTGAGTTAAATTTTGCCCTGTGCTTTTATGCTAAGCATGTAATAGGGCCTTGTGAGCGCGCTTCTTG
TAATTTATTTGTATATAGACATGTTTGTCTGGTGAAGAACATTACCGTAAAAGAAGAGCATTGAGAAGTCATTATATTTATCATCAGATGAAATGATTTCTTGCAATCTC
TTCATCCTACTACCACAGAAATAAGAACACGATCACAATTCACACCTTCGATTCAAC

Protein sequence

Show/hide protein sequence

SMMTNDRTHPSGLVISYTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLEDIAERKAY
QELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSKIKKSQ

MC06g1678 (gene) of Bitter gourd (Dali-11) v1 genome