CuGenDBv2

Gene ID	MC06g1707
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L35
Genome location	MC06:24486394..24489718
RNA-Seq Expression	MC06g1707
Synteny	MC06g1707
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR021137 - Ribosomal protein L35 IPR037229 - Ribosomal protein L35 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7036224.1 hypothetical protein SDJN02_03026 [Cucurbita argyrosperma subsp. argyrosperma]

2.78e-99

89.29

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRS   PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]

8.73e-112

100

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

XP_022931031.1 uncharacterized protein LOC111437349 [Cucurbita moschata]

4.80e-100

89.88

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

XP_022996248.1 uncharacterized protein LOC111491530 [Cucurbita maxima]

2.04e-101

91.07

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+KFYSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

XP_023532529.1 uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]

1.18e-100

90.48

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBT5 Uncharacterized protein

3.39e-93

84.52

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLR CAKLRSAAAKPSQ+++SVSSTRRIFHS+PSLYQPLHF+ NNL+SRS+FNAS QTHS LAAYQCIRSSPLPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAH KSK+SKR+LR+PA VPLAYAKVMKKLNFC 
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

A0A1S3CDR4 uncharacterized protein LOC103499252

9.06e-93

85.12

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCAKLRSAAAKPSQ+V SVSSTRRIFHS+PSLYQPLHF+PNNL+SRS+FNA  QTHS LAAYQCIRSS LPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAH KSK+SKR+LR+PA VPLAYAKVMKKLNFC 
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

A0A6J1DPB8 uncharacterized protein LOC111023059

4.23e-112

100

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

A0A6J1ESK5 uncharacterized protein LOC111437349

2.32e-100

89.88

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

A0A6J1KAA4 uncharacterized protein LOC111491530

9.87e-102

91.07

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Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSS  PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+KFYSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G45590.1 Ribosomal protein L35

6.6e-29

46.51

Show/hide

Query:  MLRWCAKLRSAAAKPSQ-LVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRER----RKRRKPM
        M R+C KLRS + + ++ L    +S  R+ H SPS  + L       ++ + ++         +    + ++ +P   VQVR+++S+E+    +K+ +P 
Subjt:  MLRWCAKLRSAAAKPSQ-LVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRER----RKRRKPM

Query:  TPVTSKLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFC
        TP+TSK+KK K+KFYSS+K RF  + DG+I+R KEGKRHNAHLKSKKSKRRLRQP  VP AYAKVMKKLNFC
Subjt:  TPVTSKLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFC

Sequences

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CDS sequence

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ATGCTCCGGTGGTGCGCGAAGCTCCGATCTGCGGCGGCGAAACCATCTCAACTCGTACATTCCGTTTCCTCCACCCGCAGGATCTTTCACTCTTCTCCATCACTGTACCA
GCCTCTCCATTTCGCTCCGAATAATTTGAGTTCCAGGTCCATTTTCAATGCATCTCTACAGACGCACTCTTCGCTCGCGGCTTACCAGTGTATTCGGTCTTCACCCCTAC
CTCTCTCCGTTGTTCAAGTGCGGCATGTTTCGTCAAGAGAGCGACGGAAGAGGAGAAAGCCGATGACGCCAGTCACTTCCAAATTGAAGAAAACTAAGATGAAATTTTAC
TCTTCTTACAAGTCTAGGTTCTGGATGATGAAGGATGGGAGCATTAAACGTCGAAAGGAGGGGAAAAGGCACAATGCACATTTGAAGTCCAAGAAATCAAAACGTAGACT
GAGACAACCTGCCACTGTCCCATTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGCGGATAG

mRNA sequence

Show/hide mRNA sequence

AATTCGTGGAAAAAATGGAAGGCGCCATCCCCAACCTTCGCGAGCGTAGGTCTCTCTCTCTCTTTCAACCATTTCCCACCGCCGTTGGAGTACGACGACGACGACGATGC
TCCGGTGGTGCGCGAAGCTCCGATCTGCGGCGGCGAAACCATCTCAACTCGTACATTCCGTTTCCTCCACCCGCAGGATCTTTCACTCTTCTCCATCACTGTACCAGCCT
CTCCATTTCGCTCCGAATAATTTGAGTTCCAGGTCCATTTTCAATGCATCTCTACAGACGCACTCTTCGCTCGCGGCTTACCAGTGTATTCGGTCTTCACCCCTACCTCT
CTCCGTTGTTCAAGTGCGGCATGTTTCGTCAAGAGAGCGACGGAAGAGGAGAAAGCCGATGACGCCAGTCACTTCCAAATTGAAGAAAACTAAGATGAAATTTTACTCTT
CTTACAAGTCTAGGTTCTGGATGATGAAGGATGGGAGCATTAAACGTCGAAAGGAGGGGAAAAGGCACAATGCACATTTGAAGTCCAAGAAATCAAAACGTAGACTGAGA
CAACCTGCCACTGTCCCATTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGCGGATAGATTACTGGTAATCCCTCTCTTGTGCTAGTATCTGGATTGGACGAACT
CCCAAATCACATCATTGGGTTATTAGTCCTTGCTTCTCTTTTGGATTTATAAATTCAGAGCCCTAGAACAAAGTAAGATAGAGAACAACTATTCGTTTTATATGCAGTTA
ATGATAGAAACGACTGTGATTGAAAACCACGTGATCTATGAATGGTCACGTTGTACCAAGAGTTAGTCCAACCGTGTCGAATAATATTTATCTGCCACATGAGATATGAC
TGAGTTCAATTGTTAATGAAAAGTGAAACATTTAGAGCGTACTGATGGAAGATGTTTGCTCCATCTATTCTGGTG

Protein sequence

Show/hide protein sequence

MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSPLPLSVVQVRHVSSRERRKRRKPMTPVTSKLKKTKMKFY
SSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

MC06g1707 (gene) of Bitter gourd (Dali-11) v1 genome