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MC06g1740 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1740
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationMC06:24732991..24733315
RNA-Seq ExpressionMC06g1740
SyntenyMC06g1740
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7845583.1 RPM1-interacting protein 4 [Senna tora]3.12e-0746.27Show/hide
Query:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLP-------RLNVNSTQNQDHEHNQKV
        +AAVPKFGEW++ D  + D +T IFN+VRE RQ A +AP  P       R   N  + Q H+H Q V
Subjt:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLP-------RLNVNSTQNQDHEHNQKV

KAG6606311.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]5.80e-1770Show/hide
Query:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQE-AARAPTLPRLNVNSTQNQDHEHNQK
        E AVPKFGEWNDRDAT PDNYTAIF +VRE RQ+  AR PTLP+ N N   NQ+ E NQK
Subjt:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQE-AARAPTLPRLNVNSTQNQDHEHNQK

KAG7036250.1 hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma]1.06e-1768.75Show/hide
Query:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQE-AARAPTLPRLNVNSTQNQDHEHNQKVMKS
        E AVPKFGEWNDRDAT PDNYTAIF +VRE RQ+  AR PTLP+ N N   NQ+ E NQKV  S
Subjt:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQE-AARAPTLPRLNVNSTQNQDHEHNQKVMKS

XP_035547329.1 RPM1-interacting protein 4-like [Juglans regia]9.97e-0749.15Show/hide
Query:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRLNVNSTQNQDHEHNQK
        AAVPKFGEW++ +  + D +T IFN+VRE RQ    R P  P  + N+T+NQD + N K
Subjt:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRLNVNSTQNQDHEHNQK

XP_038888923.1 RPM1-interacting protein 4-like [Benincasa hispida]1.10e-1970.97Show/hide
Query:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAA-RAPTLPRLNVNSTQNQDHEHNQK
        ++EA VPKFGEW+DRDA AP+NYTAIF +VREGRQE   RA T PR   NST NQ+HEHNQK
Subjt:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAA-RAPTLPRLNVNSTQNQDHEHNQK

TrEMBL top hitse value%identityAlignment
A0A0A0L950 AvrRpt-cleavage domain-containing protein1.22e-1459.68Show/hide
Query:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRLNVNSTQNQDHEHNQKV
        ++E AVPKFGEW+D DA AP+NYTAIFN+VRE RQ+     T  RL ++ST +Q+HE NQK+
Subjt:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRLNVNSTQNQDHEHNQKV

A0A6A6K948 AvrRpt-cleavage domain-containing protein2.31e-0657.14Show/hide
Query:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLP
        AAVPKFGEW++ +  + D YT IFN+VRE RQ EA + P +P
Subjt:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLP

A0A6A6KKB4 Uncharacterized protein1.75e-0648.39Show/hide
Query:  DEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQE-AARAPTLPRLNVNSTQNQDHEHNQKV
        D +AVPKFGEW++ D  + D YT IFN+VRE +Q  AA+ P LP     +  +Q H H Q V
Subjt:  DEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQE-AARAPTLPRLNVNSTQNQDHEHNQKV

A0A6P5X826 RPM1-interacting protein 4-like isoform X32.35e-0641.27Show/hide
Query:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRLNVNSTQNQDHEHNQKVMKSS
        A++PKFGEW++ D T+ + YTAIFN+V+E +Q  +  P +P    N +   DH H ++   SS
Subjt:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRLNVNSTQNQDHEHNQKVMKSS

A0A6P9EIK4 RPM1-interacting protein 4-like4.83e-0749.15Show/hide
Query:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRLNVNSTQNQDHEHNQK
        AAVPKFGEW++ +  + D +T IFN+VRE RQ    R P  P  + N+T+NQD + N K
Subjt:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRLNVNSTQNQDHEHNQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25070.1 RPM1 interacting protein 41.6e-0451.52Show/hide
Query:  VPKFGEWNDRDATAPDNYTAIFNRVREGRQEAA
        VPKFG+W++ + ++ D YT IFN+VRE R   A
Subjt:  VPKFGEWNDRDATAPDNYTAIFNRVREGRQEAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGACGAAGCTGCAGTTCCAAAATTTGGTGAATGGAACGATAGGGACGCGACAGCACCGGACAACTACACAGCTATTTTCAACAGGGTGCGGGAGGGGAGACAGGAGGC
AGCTAGAGCACCGACACTGCCGCGGTTGAACGTTAACAGCACACAGAACCAAGATCATGAACACAACCAAAAGGTAATGAAGAGCTCAATTCCATATCTCAGCCAGCCAC
ATGAGTTGGATTACAATATGCAATGTCTTACATTTTGTTGTCTTCCTGATCTAAGAAATGCTGTTGCTTCCCATGGCCAAGAAAATGATGATGTTCTC
mRNA sequenceShow/hide mRNA sequence
AATGACGAAGCTGCAGTTCCAAAATTTGGTGAATGGAACGATAGGGACGCGACAGCACCGGACAACTACACAGCTATTTTCAACAGGGTGCGGGAGGGGAGACAGGAGGC
AGCTAGAGCACCGACACTGCCGCGGTTGAACGTTAACAGCACACAGAACCAAGATCATGAACACAACCAAAAGGTAATGAAGAGCTCAATTCCATATCTCAGCCAGCCAC
ATGAGTTGGATTACAATATGCAATGTCTTACATTTTGTTGTCTTCCTGATCTAAGAAATGCTGTTGCTTCCCATGGCCAAGAAAATGATGATGTTCTC
Protein sequenceShow/hide protein sequence
NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRLNVNSTQNQDHEHNQKVMKSSIPYLSQPHELDYNMQCLTFCCLPDLRNAVASHGQENDDVL