; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g1761 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1761
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTranscription initiation factor IIF subunit alpha
Genome locationMC06:24890628..24895818
RNA-Seq ExpressionMC06g1761
SyntenyMC06g1761
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process)
GO:0005674 - transcription factor TFIIF complex (cellular component)
GO:0001096 - TFIIF-class transcription factor complex binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domainsIPR008851 - Transcription initiation factor IIF, alpha subunit
IPR011039 - Transcription Factor IIF, Rap30/Rap74, interaction
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152016.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus]0.092.76Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SDRGEEDEEEEAARKNRLGL+KK G DDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI

Query:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+SK+TDEGV TSKSTASKGAPASVKTE +  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_016900419.1 PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo]0.092.21Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SDRGEEDEEEEAARKNRLGL+KK G DDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI

Query:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+ K TDEGV TSKSTASKGAPASVKTE +  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_022159266.1 transcription initiation factor IIF subunit alpha [Momordica charantia]0.0100Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETT
        GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETT
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETT

Query:  APDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIP
        APDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIP
Subjt:  APDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIP

Query:  SGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        SGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  SGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_022931161.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata]0.091.67Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGS+T+LYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKD+VGA+GRGRRK T DENEGN SDRGEEDEEEEAARKNRLGLNKK G DDDDEEGPRGG+HD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGED-DDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKP
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE+ DDDDDD EE+ GGTPV  SKQKD VKEEAAA+SPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGED-DDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKP

Query:  IPSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKF
         PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+SKSTDEGVSTS+STASKGA ASVKTE A  SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  IPSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_038888042.1 transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]0.092.76Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MSFDL+LKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRK TGDENEGN SDRGEEDEEEEA RKNRLGLNKK G DDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI
        TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI

Query:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+SKSTDE VSTSKSTASKGAPA VKTE A  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

TrEMBL top hitse value%identityAlignment
A0A0A0LCA6 Transcription initiation factor IIF subunit alpha0.092.76Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SDRGEEDEEEEAARKNRLGL+KK G DDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI

Query:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+SK+TDEGV TSKSTASKGAPASVKTE +  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A1S4DWR2 Transcription initiation factor IIF subunit alpha0.092.21Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SDRGEEDEEEEAARKNRLGL+KK G DDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPI

Query:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+ K TDEGV TSKSTASKGAPASVKTE +  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1E3E1 Transcription initiation factor IIF subunit alpha0.0100Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETT
        GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETT
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETT

Query:  APDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIP
        APDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIP
Subjt:  APDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIP

Query:  SGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        SGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  SGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1ESX1 Transcription initiation factor IIF subunit alpha0.091.67Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGS+T+LYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKD+VGA+GRGRRK T DENEGN SDRGEEDEEEEAARKNRLGLNKK G DDDDEEGPRGG+HD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGED-DDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKP
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE+ DDDDDD EE+ GGTPV  SKQKD VKEEAAA+SPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGED-DDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKP

Query:  IPSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKF
         PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+SKSTDEGVSTS+STASKGA ASVKTE A  SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  IPSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1K1N5 Transcription initiation factor IIF subunit alpha0.090.61Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGS+T+LYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEK-GDDWEHEEIFTDDDE
        GPAAFGEVEKFDDKD++GA+GRGRRK T DENEGN SDRGEEDEEEEAARKNRLGLNKK G DDDDEEGPRGGDHD+DDDDIE  GDDWEHEEIFTDDDE
Subjt:  GPAAFGEVEKFDDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSG-DDDDEEGPRGGDHDMDDDDIEK-GDDWEHEEIFTDDDE

Query:  TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE---DDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSP
        TTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRR+GGLNDSDGE   DDDDDDD EE+ GGTPV  SKQKD VKEEAAA+SP
Subjt:  TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE---DDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSP

Query:  SKPIPSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLV
        SKP PSGS+KGT S+ K +KGKRK NG+DVKPS+ PPKK+KTET+SKSTDEG+STS+STASKGA ASVKTE A  SGPVTEEEIRAVLRQRTPVTTQDLV
Subjt:  SKPIPSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLV

Query:  AKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        AKFKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  AKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

SwissProt top hitse value%identityAlignment
Q05913 General transcription factor IIF subunit 11.9e-0527.35Show/hide
Query:  RPWLLE--DETGQFQFQGHLEG--SQSATYYLLV-LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEK
        +PW+L+   +TG+ +F+G  EG   ++A +Y+          A P   WYNF  + +YK L+ EEAE++   RKK  + Y   M++    G     E E+
Subjt:  RPWLLE--DETGQFQFQGHLEG--SQSATYYLLV-LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEK

Query:  FDDKDA---VGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDD----EEGPRGGD-----HDMDDDDIEKGDDWEHEEIFTDDDE
         D ++A     A+ + +     D +E   S+   + E+EE  +K      K+  D DD     +G +G D      D+DD+  E+ DD + E    D D 
Subjt:  FDDKDA---VGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDD----EEGPRGGD-----HDMDDDDIEKGDDWEHEEIFTDDDE

Query:  TTA---PDREERED---------------LAPEVPAPPEIKQDEDDEDE-------ENEGEGGLSKSGKELKKL----LRRTGGLNDSDGEDDDDDDDVE
        +++   PD E + D               L  +     E K DE D+++       +++G+  +SK  K+ K        ++ G  DS  +   D  D E
Subjt:  TTA---PDREERED---------------LAPEVPAPPEIKQDEDDEDE-------ENEGEGGLSKSGKELKKL----LRRTGGLNDSDGEDDDDDDDVE

Query:  EDIGGTP-----VVASKQKDTVKEEAAASSPSKPIPSGSS-----KGTPS-STKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKG
        +D+   P     VV  K K+  KE+ +A+S SK I S S+       TP+ ST AS  KRK+N       ++P     ++T +  T       K+  S  
Subjt:  EDIGGTP-----VVASKQKDTVKEEAAASSPSKPIPSGSS-----KGTPS-STKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKG

Query:  APASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKAR---LRSQEDKNAFAEILRRISRIQKTNGGPSYVVLR
         P S         G +TEE +R  L+ R P+T  +L+ KFK +   + S        +IL++I+ ++ T  G  Y+ ++
Subjt:  APASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKAR---LRSQEDKNAFAEILRRISRIQKTNGGPSYVVLR

Q54WV4 General transcription factor IIF subunit 14.9e-1427.73Show/hide
Query:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF
        K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ LT EEAE+ MK + +  D +   + K      +  G  E  
Subjt:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF

Query:  DDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLA
          K          R    D N    ++  EE ++++A  + R   ++ +G+D D         D DDD    GD        T +DE    + EE ED+ 
Subjt:  DDKDAVGASGRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLA

Query:  PEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQ------KDTVKEEAAASSPSKPIPSGSSK
               E+K+    + ++N+ E  L+    + K     TGG +D D ++DD+D D ++D+   P V  K         +VK+E      SK       K
Subjt:  PEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQ------KDTVKEEAAASSPSKPIPSGSSK

Query:  GTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSG-PVTEEEIRAVLRQRTPVTTQDLVAKFKARLRS
           SS K+ + K K N  D    N   KK+K E  S    +  S S+           + ++  P+  P TEE I+ VL++   V + DL+  FK  L++
Subjt:  GTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETDSKSTDEGVSTSKSTASKGAPASVKTESALPSG-PVTEEEIRAVLRQRTPVTTQDLVAKFKARLRS

Query:  QEDKNAFAEILRRISRIQKTNG
         ++K  F  ++  ++R+ + NG
Subjt:  QEDKNAFAEILRRISRIQKTNG

Q9SU25 Transcription initiation factor IIF subunit alpha8.3e-18768.74Show/hide
Query:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL
        MS  L L  SC GCGS +DLYGS+C+HMTLCL CG+TMA+NK KC++CG  VTRLIREYNVRA+A +DKNYFIGRF++GLPNF  K+ +ENKWSL K+  
Subjt:  MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQ +DA REK KN+PW+LEDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+N
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE
        GPA FGEV+   +     G  GRGR+K++ GDE EGN SDRG+EDEEEEA+RK+RLGLN+KS DDDDEEGPRGGD DMDDDDIEKGDDWEHEEIFTDDDE
Subjt:  GPAAFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDE

Query:  TTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSK
            D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSKSGKELKKLL +  GL++SD +DDDD DD EE   GT V  SKQK+  KEE   ++P+K
Subjt:  TTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSK

Query:  PIPSGSSKGTPSSTKASKGKRKLN-GDDVKPSNVPPKKVKTETDSKST---DEGVSTSKST----ASKGAPASV-KTESALPSGPVTEEEIRAVLRQRTP
        P PSG  +GTP + K SKGKRKLN GD  KPS+   KKVKTE D KS+   +   + SKS     A K  PAS   + S+  +GPVTE+EIRAVL ++  
Subjt:  PIPSGSSKGTPSSTKASKGKRKLN-GDDVKPSNVPPKKVKTETDSKST---DEGVSTSKST----ASKGAPASV-KTESALPSGPVTEEEIRAVLRQRTP

Query:  VTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRK
        VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++VVLR+
Subjt:  VTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRK

Arabidopsis top hitse value%identityAlignment
AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors1.2e-12167.16Show/hide
Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNASDRGEED
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+   +     G  GRGR+K++ GDE EGN SDRG+ED
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNASDRGEED

Query:  EEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGK
        EEEEA+RK+RLGLN+KS DDDDEEGPRGGD DMDDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSKSGK
Subjt:  EEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGK

Query:  ELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRKLN-GDDVKPSNVPPKKVKTETDS
        ELKKLL +  GL++SD +DDDD DD EE   GT V  SKQK+  KEE   ++P+KP PSG  +GTP + K SKGKRKLN GD  KPS+   KKVKTE D 
Subjt:  ELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRKLN-GDDVKPSNVPPKKVKTETDS

Query:  KST---DEGVSTSKST----ASKGAPASV-KTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVL
        KS+   +   + SKS     A K  PAS   + S+  +GPVTE+EIRAVL ++  VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++VVL
Subjt:  KST---DEGVSTSKST----ASKGAPASV-KTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVL

Query:  RK
        R+
Subjt:  RK

AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors1.2e-12167.16Show/hide
Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNASDRGEED
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+   +     G  GRGR+K++ GDE EGN SDRG+ED
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAV-GASGRGRRKTT-GDENEGNASDRGEED

Query:  EEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGK
        EEEEA+RK+RLGLN+KS DDDDEEGPRGGD DMDDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSKSGK
Subjt:  EEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGK

Query:  ELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRKLN-GDDVKPSNVPPKKVKTETDS
        ELKKLL +  GL++SD +DDDD DD EE   GT V  SKQK+  KEE   ++P+KP PSG  +GTP + K SKGKRKLN GD  KPS+   KKVKTE D 
Subjt:  ELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRKLN-GDDVKPSNVPPKKVKTETDS

Query:  KST---DEGVSTSKST----ASKGAPASV-KTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVL
        KS+   +   + SKS     A K  PAS   + S+  +GPVTE+EIRAVL ++  VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++VVL
Subjt:  KST---DEGVSTSKST----ASKGAPASV-KTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVL

Query:  RK
        R+
Subjt:  RK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCGATCTGCTGCTGAAGCCGTCGTGCAGTGGATGCGGGTCCTCGACGGATTTGTATGGGAGCAATTGTAAGCACATGACTTTGTGCTTGACCTGCGGCAAAAC
TATGGCTGAGAATAAGGGCAAATGTTACGACTGTGGCGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGCAAGTAGCGACAAGAACTACTTCATTG
GTAGGTTCATGAGTGGGCTGCCAAACTTCTCGAGGAAGAGAAATGCTGAAAATAAATGGTCTCTTTACAAGGAAGGTCTTCAAGGACGCCAGCTTTCTGATGCCTTGCGG
GAGAAATACAAGAATAGACCCTGGCTCTTGGAAGATGAAACGGGCCAATTTCAGTTCCAAGGACATCTTGAAGGTTCACAGTCAGCAACATATTACTTGCTTGTATTGCA
AGGGAAGGAATTTACTGCCATTCCTGCTGGTTCTTGGTACAATTTCAACAAAGTGGCACAGTATAAGCAACTTACGTTGGAGGAGGCAGAAGAGAAAATGAAGAATCGAA
AGAAAACAGCTGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCTTTTGGTGAAGTCGAGAAGTTTGATGACAAAGATGCTGTTGGTGCTAGT
GGTCGGGGGCGCAGGAAAACTACTGGTGATGAGAATGAAGGTAATGCCTCAGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCGGCAAGGAAGAACAGGTTGGGCCTCAA
TAAAAAGAGCGGCGATGATGATGATGAGGAAGGTCCTAGGGGAGGTGACCATGACATGGACGATGATGATATTGAGAAAGGAGATGATTGGGAGCACGAAGAAATTTTTA
CTGATGATGACGAAACTACTGCTCCTGATCGTGAAGAAAGGGAGGATTTGGCCCCCGAGGTTCCGGCACCTCCAGAAATCAAGCAGGATGAAGACGACGAGGATGAAGAA
AATGAAGGGGAGGGTGGTCTGAGCAAATCTGGAAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGAGGTCTTAATGATTCAGATGGAGAGGATGACGACGACGATGACGA
TGTGGAGGAGGATATTGGTGGCACCCCAGTTGTGGCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAGCAGTCCCTCAAAGCCTATACCTTCTGGATCTT
CTAAGGGAACCCCGTCTTCTACGAAGGCATCCAAGGGGAAAAGAAAATTAAATGGCGACGATGTGAAACCATCTAATGTACCTCCGAAGAAAGTGAAAACCGAGACGGAT
TCGAAGTCTACAGACGAGGGTGTGTCTACATCTAAAAGTACGGCCTCGAAAGGTGCACCGGCATCAGTCAAAACAGAATCGGCATTGCCTTCTGGACCTGTTACTGAAGA
AGAAATCAGGGCTGTTTTGCGGCAAAGGACTCCTGTGACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGACTAAGGTCTCAAGAGGACAAGAATGCATTTGCAGAAA
TACTGAGGAGAATTTCAAGGATCCAAAAGACTAATGGAGGACCAAGTTATGTTGTGTTGAGAAAACCTGAAGACTAG
mRNA sequenceShow/hide mRNA sequence
CCTTTTTACTCGAGGAAAAGGATTGGAGTAAGAATAAATACAGAAAAAGTTAGAAAATTTGTTTCGTAAGACAACAATTATTTACTTCGAAAAAGGGCTAAGGGTGCCTG
CGGTCTCGAGACTCAGAATCATAGTATTATTTCCGGTTTCGGTCTGAAGAACTGCGATTTTTGCAATTCTCCTATCTCAGAAAGCTTACTCTCTTTCTTAGATCCTGTAA
CTACTGTCGATTGATGTGGATTCTGCACCAACTGGTCATAATTCTGCAAATTTACGGCCAGAGAAACTTGAAGTTTTCAATCTTGTTGGGGTTCTTCATCAATTGAATTT
TTGTGGCTAAATAAGGAGGTGGGAAAATGTCATTCGATCTGCTGCTGAAGCCGTCGTGCAGTGGATGCGGGTCCTCGACGGATTTGTATGGGAGCAATTGTAAGCACATG
ACTTTGTGCTTGACCTGCGGCAAAACTATGGCTGAGAATAAGGGCAAATGTTACGACTGTGGCGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGC
AAGTAGCGACAAGAACTACTTCATTGGTAGGTTCATGAGTGGGCTGCCAAACTTCTCGAGGAAGAGAAATGCTGAAAATAAATGGTCTCTTTACAAGGAAGGTCTTCAAG
GACGCCAGCTTTCTGATGCCTTGCGGGAGAAATACAAGAATAGACCCTGGCTCTTGGAAGATGAAACGGGCCAATTTCAGTTCCAAGGACATCTTGAAGGTTCACAGTCA
GCAACATATTACTTGCTTGTATTGCAAGGGAAGGAATTTACTGCCATTCCTGCTGGTTCTTGGTACAATTTCAACAAAGTGGCACAGTATAAGCAACTTACGTTGGAGGA
GGCAGAAGAGAAAATGAAGAATCGAAAGAAAACAGCTGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCTTTTGGTGAAGTCGAGAAGTTTG
ATGACAAAGATGCTGTTGGTGCTAGTGGTCGGGGGCGCAGGAAAACTACTGGTGATGAGAATGAAGGTAATGCCTCAGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCG
GCAAGGAAGAACAGGTTGGGCCTCAATAAAAAGAGCGGCGATGATGATGATGAGGAAGGTCCTAGGGGAGGTGACCATGACATGGACGATGATGATATTGAGAAAGGAGA
TGATTGGGAGCACGAAGAAATTTTTACTGATGATGACGAAACTACTGCTCCTGATCGTGAAGAAAGGGAGGATTTGGCCCCCGAGGTTCCGGCACCTCCAGAAATCAAGC
AGGATGAAGACGACGAGGATGAAGAAAATGAAGGGGAGGGTGGTCTGAGCAAATCTGGAAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGAGGTCTTAATGATTCAGAT
GGAGAGGATGACGACGACGATGACGATGTGGAGGAGGATATTGGTGGCACCCCAGTTGTGGCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAGCAGTCC
CTCAAAGCCTATACCTTCTGGATCTTCTAAGGGAACCCCGTCTTCTACGAAGGCATCCAAGGGGAAAAGAAAATTAAATGGCGACGATGTGAAACCATCTAATGTACCTC
CGAAGAAAGTGAAAACCGAGACGGATTCGAAGTCTACAGACGAGGGTGTGTCTACATCTAAAAGTACGGCCTCGAAAGGTGCACCGGCATCAGTCAAAACAGAATCGGCA
TTGCCTTCTGGACCTGTTACTGAAGAAGAAATCAGGGCTGTTTTGCGGCAAAGGACTCCTGTGACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGACTAAGGTCTCA
AGAGGACAAGAATGCATTTGCAGAAATACTGAGGAGAATTTCAAGGATCCAAAAGACTAATGGAGGACCAAGTTATGTTGTGTTGAGAAAACCTGAAGACTAGAAGAAGA
TTTCAATTTATGCTTCTTTTTGATGCAGCTGGTTCATGATTCCCATCTGGTTGGTGGGTTACGGCCATCAAAATGTGTATTTATTTACTTTTTCGATACAAAGGATAAAT
TTGTGACCTTGAAAGAGGCATTCGCTGTTGGAATTTAAGTTGCAAGAGATTTGTCCACATTAATTAAGAAACGAAATATTCCACAGACCCTTTGTCATATTGGTTGTCAT
ATTGATTTCCTCATTTTTTAGAACGTATAAAATAATGGAAGTTATATAAAAAAAATG
Protein sequenceShow/hide protein sequence
MSFDLLLKPSCSGCGSSTDLYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSRKRNAENKWSLYKEGLQGRQLSDALR
EKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDAVGAS
GRGRRKTTGDENEGNASDRGEEDEEEEAARKNRLGLNKKSGDDDDEEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEDDEDEE
NEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVEEDIGGTPVVASKQKDTVKEEAAASSPSKPIPSGSSKGTPSSTKASKGKRKLNGDDVKPSNVPPKKVKTETD
SKSTDEGVSTSKSTASKGAPASVKTESALPSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED