; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g1762 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1762
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionC2H2-like zinc finger protein, putative
Genome locationMC06:24897902..24898453
RNA-Seq ExpressionMC06g1762
SyntenyMC06g1762
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606329.1 Protein LATE FLOWERING, partial [Cucurbita argyrosperma subsp. sororia]2.08e-5459.79Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP
        MEDEE+  QV ESS+ EME  E PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRISDY+ ++  S        P  +FA S    H  + P 
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP

Query:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        PMYIAA    H +  HCFPN+Q +  DGLG      PKFE+MVYYG     +RYQ  GEDE++VLNWQRS+KK       DKEKE+KLDLSLHL
Subjt:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

XP_022159689.1 protein LATE FLOWERING [Momordica charantia]2.02e-12799.46Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI
        MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRIS YAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI

Query:  AAAAAAHASHYHCFPNNQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        AAAAAAHASHYHCFPNNQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
Subjt:  AAAAAAHASHYHCFPNNQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

XP_022931139.1 protein LATE FLOWERING [Cucurbita moschata]1.86e-5359.28Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP
        MEDEE+  QV ESS+ EME  E PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKR+SDY+ ++  S S  P      +FA +    H  + P 
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP

Query:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        P+YIAA    H ++ HCFPNNQ +  DGLG      PKFE+MVYYG     +RYQ  GEDE +VLNWQRS+KK       DKEKE+KLDLSLHL
Subjt:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

XP_022996351.1 protein LATE FLOWERING-like [Cucurbita maxima]1.83e-5359.79Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP
        MEDEE+  QV ESS+ EME  E PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRISDY+ ++  S        P  +FA +    H  + P 
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP

Query:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        PMYIAA    H  + HCFPN+Q +  DGLG      PKFE+MVYYG     +RYQ  GEDE+NVLNWQRS+KK       DKEKE+KLDLSLHL
Subjt:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

XP_038888938.1 protein LATE FLOWERING [Benincasa hispida]7.06e-6462.69Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHT----GLWPP
        ME EEK+SQV E++N  +E EE P+RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDY+ TNF SP  P P PP  +F ASH     GL P 
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHT----GLWPP

Query:  PMYIAAAAAAHASHYHCFPNNQMLCDGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        P+YIA     H ++ HCFPNNQ L             +ENMVY G     +RY Q G DE+N+LNW+RS+KK++SRI+HDKEKE+KLDLSLHL
Subjt:  PMYIAAAAAAHASHYHCFPNNQMLCDGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

TrEMBL top hitse value%identityAlignment
A0A0A0LE19 C2H2-type domain-containing protein2.16e-5258.52Show/hide
Query:  EEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYA---PTNFPSPSPPPPPPPPPIFAAS----HTGLWPPPMYIAAAAAAHASHYHC
        EE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY+   P+ FP+P+         +FAAS    H GL P P+YIA     H ++ HC
Subjt:  EEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYA---PTNFPSPSPPPPPPPPPIFAAS----HTGLWPPPMYIAAAAAAHASHYHC

Query:  FPNNQMLCDGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        FPNNQ L             +ENMV+ G     +RY Q   DE+N+LNW+R++KK++SRI+HDKEKE+KLDLSLHL
Subjt:  FPNNQMLCDGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

A0A1S3BIU8 protein LATE FLOWERING-like1.35e-4956.11Show/hide
Query:  MEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYA---PTNFPSPSPPPPPPPPPIFAASH-----TGLWPPPMYIAAAAAAHAS
        +E EE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY+   P+ F +P+         +FAAS       GL P P+YIA     H +
Subjt:  MEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYA---PTNFPSPSPPPPPPPPPIFAASH-----TGLWPPPMYIAAAAAAHAS

Query:  HYHCFPNNQMLCDGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        + HCFPNNQ L             +ENMV+ G     +RY Q   DE+N+LNW+R++K ++SRI+HDKEKE+KLDLSLHL
Subjt:  HYHCFPNNQMLCDGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

A0A6J1E329 protein LATE FLOWERING9.77e-12899.46Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI
        MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRIS YAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI

Query:  AAAAAAHASHYHCFPNNQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        AAAAAAHASHYHCFPNNQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
Subjt:  AAAAAAHASHYHCFPNNQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

A0A6J1ETH7 protein LATE FLOWERING9.01e-5459.28Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP
        MEDEE+  QV ESS+ EME  E PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKR+SDY+ ++  S S  P      +FA +    H  + P 
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP

Query:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        P+YIAA    H ++ HCFPNNQ +  DGLG      PKFE+MVYYG     +RYQ  GEDE +VLNWQRS+KK       DKEKE+KLDLSLHL
Subjt:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

A0A6J1K4H5 protein LATE FLOWERING-like8.86e-5459.79Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP
        MEDEE+  QV ESS+ EME  E PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRISDY+ ++  S        P  +FA +    H  + P 
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAAS----HTGLWPP

Query:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
        PMYIAA    H  + HCFPN+Q +  DGLG      PKFE+MVYYG     +RYQ  GEDE+NVLNWQRS+KK       DKEKE+KLDLSLHL
Subjt:  PMYIAAAAAAHASHYHCFPNNQMLC-DGLGAAIGAAPKFENMVYYG-----SRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 26.9e-0868.42Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

Q39263 Zinc finger protein 41.3e-1160Show/hide
Query:  VSQVGESSNFEMEQEEIPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        +S   ESSN E +Q++ PS   RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  VSQVGESSNFEMEQEEIPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

Q39266 Zinc finger protein 79.0e-0869.23Show/hide
Query:  EIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKA
        E   RVF C +C RKF SSQALGGHQNAHK+ERT A++A
Subjt:  EIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKA

Q9FFX4 Zinc finger protein KNUCKLES9.0e-0850Show/hide
Query:  KVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        K     +  +F         R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  KVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

Q9FKA9 Protein LATE FLOWERING2.3e-1133.16Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI
        +E EE++    E++  +     +  R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+   N    +        P+F +S     P   ++
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI

Query:  AAAAAAHASHYHCFPN---NQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
               ++   CFP    +  +    G+ +  A   +     G    Q   D          +  + + ++ DK K++ LDLSLHL
Subjt:  AAAAAAHASHYHCFPN---NQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 76.4e-0969.23Show/hide
Query:  EIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKA
        E   RVF C +C RKF SSQALGGHQNAHK+ERT A++A
Subjt:  EIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKA

AT1G66140.1 zinc finger protein 49.5e-1360Show/hide
Query:  VSQVGESSNFEMEQEEIPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        +S   ESSN E +Q++ PS   RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  VSQVGESSNFEMEQEEIPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein6.4e-0950Show/hide
Query:  KVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        K     +  +F         R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  KVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

AT5G48890.1 C2H2-like zinc finger protein1.6e-1233.16Show/hide
Query:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI
        +E EE++    E++  +     +  R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+   N    +        P+F +S     P   ++
Subjt:  MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYI

Query:  AAAAAAHASHYHCFPN---NQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL
               ++   CFP    +  +    G+ +  A   +     G    Q   D          +  + + ++ DK K++ LDLSLHL
Subjt:  AAAAAAHASHYHCFPN---NQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL

AT5G57520.1 zinc finger protein 24.9e-0968.42Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATGAGGAGAAGGTTTCACAAGTGGGAGAAAGCAGCAACTTTGAAATGGAACAAGAAGAAATCCCATCAAGAGTCTTCCCCTGTTTGTTCTGTTCAAGAAAGTT
TCAAAGCTCTCAGGCCTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGAGGACGGCGGCGAGGAAGGCGAAGCGGATTTCCGACTACGCCCCGACCAATTTCCCGTCAC
CGTCGCCACCGCCACCGCCACCACCGCCGCCCATCTTTGCAGCTAGTCATACAGGGCTGTGGCCACCTCCAATGTACATTGCTGCTGCTGCTGCTGCACATGCTTCCCAT
TATCATTGTTTCCCAAATAATCAGATGCTGTGTGATGGCTTGGGAGCTGCCATTGGAGCTGCTCCCAAGTTTGAGAACATGGTTTATTATGGTAGTAGATATCAACAATT
TGGGGAAGATGAACAAAATGTGTTGAATTGGCAGAGAAGCATGAAGAAAAATGTTAGTAGGATAGATCATGATAAGGAAAAAGAGAAAAAACTTGATCTTTCTCTCCATC
TA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATGAGGAGAAGGTTTCACAAGTGGGAGAAAGCAGCAACTTTGAAATGGAACAAGAAGAAATCCCATCAAGAGTCTTCCCCTGTTTGTTCTGTTCAAGAAAGTT
TCAAAGCTCTCAGGCCTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGAGGACGGCGGCGAGGAAGGCGAAGCGGATTTCCGACTACGCCCCGACCAATTTCCCGTCAC
CGTCGCCACCGCCACCGCCACCACCGCCGCCCATCTTTGCAGCTAGTCATACAGGGCTGTGGCCACCTCCAATGTACATTGCTGCTGCTGCTGCTGCACATGCTTCCCAT
TATCATTGTTTCCCAAATAATCAGATGCTGTGTGATGGCTTGGGAGCTGCCATTGGAGCTGCTCCCAAGTTTGAGAACATGGTTTATTATGGTAGTAGATATCAACAATT
TGGGGAAGATGAACAAAATGTGTTGAATTGGCAGAGAAGCATGAAGAAAAATGTTAGTAGGATAGATCATGATAAGGAAAAAGAGAAAAAACTTGATCTTTCTCTCCATC
TA
Protein sequenceShow/hide protein sequence
MEDEEKVSQVGESSNFEMEQEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAPTNFPSPSPPPPPPPPPIFAASHTGLWPPPMYIAAAAAAHASH
YHCFPNNQMLCDGLGAAIGAAPKFENMVYYGSRYQQFGEDEQNVLNWQRSMKKNVSRIDHDKEKEKKLDLSLHL