CuGenDBv2

Gene ID	MC06g1772
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein LOW PSII ACCUMULATION 1, chloroplastic
Genome location	MC06:24978977..24984019
RNA-Seq Expression	MC06g1772
Synteny	MC06g1772
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021883 - Protein LOW PSII ACCUMULATION 1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131239.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia]

2.15e-241

99.4

Show/hide

Query:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
        MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLR LQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPL SLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV

Query:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
        ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_022963501.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata]

1.41e-204

85.71

Show/hide

Query:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
        MVVSMA I S NN G PPH  RTRSHNA N KF R ICC VH   V F+ GPS+A+SLR LQ  RRNLA+ TCSA++KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALANSSRAE+VPDIL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVI +++LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV

Query:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
        ICAGPESFIMEAF++SEPFTE+LLERGV+V+PFATD SSLNFEFDERE++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_022967293.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima]

1.63e-204

85.12

Show/hide

Query:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
        MVVSMA I S NN G PPH  RTRSHNAHN KF R ICC VH   V F+ GPS+A+SLR LQ  RRNLA+ TCSA++KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN+SRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVI +++LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV

Query:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
        ICAGPES IMEAF++SEPFTE+LLERGV+V+PFATD SSLNFEFDERE++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_023554665.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita pepo subsp. pepo]

5.74e-204

85.42

Show/hide

Query:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
        MVVSMA I S NN G PPH  RTRSHNA N KF R ICC VH   V F+ GPS+A+SLR LQ  RRNLA+ TCSA++KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALANSSRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVI +++LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV

Query:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
        ICAGPESFIMEAF++SEPFTE+LLERGV+V+PFATD SSLNFEFDERE++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_038888898.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Benincasa hispida]

7.67e-200

84.91

Show/hide

Query:  MVVSMA--NISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSV
        M VS++  NISS NN   PPH  RT      +FKF R ICC VH KT+ F+S P+L +SL  L   RRNLANFTCSAA+KPEISSTAKIRSEVLSPFRSV
Subjt:  MVVSMA--NISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIAR
        RMFFYLTFIASGTLGGLIATTQLLAALANSSRAE+VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+++LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIAR

Query:  LVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDG
        LVICAGPESFIMEAF+SSEPFTE+LLERGV+VVP ATDVS+LNFEFDERE++KD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGVS++SPVYLSLRMDG
Subjt:  LVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L902 Uncharacterized protein

1.82e-199

84.02

Show/hide

Query:  MVVSM--ANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSV
        M VS+   +ISSFNN  PPPH   T SHNA +FKF R   CRVH KTV FSS P L  SLR L   RRNLANF CSAA+KPEISSTAKIRSEVLSPFRSV
Subjt:  MVVSM--ANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIAR
        RMFFYLTFIASGTLGGLIATTQLL ALANSSRA++VPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP++ LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIAR

Query:  LVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDG
        LVICAGPESFI+EAF+SSEPFTE+LLERGV+VVP ATDV++LNFEFD+RE++KD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGV+++SPVYLSLRMDG
Subjt:  LVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A5D3BG35 Protein LOW PSII ACCUMULATION 1

7.05e-197

83.14

Show/hide

Query:  MVVSMAN--ISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSV
        M VS++   +SSFNN  PPPH   T SHNA +FKF R  C  VH KTV FSS P L  SLR     RRNLAN+  SAA+KPEISSTAKIRSEVLSPFRSV
Subjt:  MVVSMAN--ISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIAR
        RMFFYLTFIASGTLGGLIATTQLL ALANSSRA++VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+++LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIAR

Query:  LVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDG
        LVICAGPESF++EAF+SSEPFTEQLLERGV+VVP ATDV++LNFEFDERE++KD+T+KRK+LWRLTPVYM EWSAWLDEQKKLAGVS++SPVYLSLRMDG
Subjt:  LVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDG

Query:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1BP58 protein LOW PSII ACCUMULATION 1, chloroplastic

1.04e-241

99.4

Show/hide

Query:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
        MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLR LQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPL SLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV

Query:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
        ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1HGA1 protein LOW PSII ACCUMULATION 1, chloroplastic

6.84e-205

85.71

Show/hide

Query:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
        MVVSMA I S NN G PPH  RTRSHNA N KF R ICC VH   V F+ GPS+A+SLR LQ  RRNLA+ TCSA++KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALANSSRAE+VPDIL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVI +++LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV

Query:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
        ICAGPESFIMEAF++SEPFTE+LLERGV+V+PFATD SSLNFEFDERE++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1HWD0 protein LOW PSII ACCUMULATION 1, chloroplastic

7.87e-205

85.12

Show/hide

Query:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM
        MVVSMA I S NN G PPH  RTRSHNAHN KF R ICC VH   V F+ GPS+A+SLR LQ  RRNLA+ TCSA++KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN+SRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVI +++LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLV

Query:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV
        ICAGPES IMEAF++SEPFTE+LLERGV+V+PFATD SSLNFEFDERE++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFRSSEPFTEQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

SwissProt top hits

e value

%identity

Alignment

Q9SRY4 Protein LOW PSII ACCUMULATION 1, chloroplastic

6.8e-30

30.94

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQS
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+     A  + +      I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  +
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQS

Query:  KVIPLNSLRGIARLVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPF---------------------ATDVSSLNFEFDEREDLKDVTTKRKR--LWR
        +V+ L  LR   R VI AG +  +  A + ++ F  +LL RGV++VP                      AT + S+  +FD R       +K K    ++
Subjt:  KVIPLNSLRGIARLVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPF---------------------ATDVSSLNFEFDEREDLKDVTTKRKR--LWR

Query:  LTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
           V   EW  W+ +Q+   GV+    VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

Arabidopsis top hits

e value

%identity

Alignment

AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein

4.9e-31

30.94

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQS
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+     A  + +      I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  +
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQS

Query:  KVIPLNSLRGIARLVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPF---------------------ATDVSSLNFEFDEREDLKDVTTKRKR--LWR
        +V+ L  LR   R VI AG +  +  A + ++ F  +LL RGV++VP                      AT + S+  +FD R       +K K    ++
Subjt:  KVIPLNSLRGIARLVICAGPESFIMEAFRSSEPFTEQLLERGVVVVPF---------------------ATDVSSLNFEFDEREDLKDVTTKRKR--LWR

Query:  LTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
           V   EW  W+ +Q+   GV+    VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

AT4G28740.1 FUNCTIONS IN: molecular_function unknown

2.9e-100

59.38

Show/hide

Query:  HSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIA
        H  +   + A     +R I    H + + FS         R  QP+     N  C AA++P EIS+ A+IRSEVLSPFRSVRMFFYL FIASG+LGGLIA
Subjt:  HSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIA

Query:  TTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-SKVIPLNSLRGIARLVICAGPESFIMEAFRSS
        T++L+ ALAN +R+ +V +I+KGLG+D GA +LFAFLYF EN  KNAQ+ARLSREE+L  LK+RV++ +KVI +  LRG+ARLVICAGP  FI EAF+ S
Subjt:  TTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-SKVIPLNSLRGIARLVICAGPESFIMEAFRSS

Query:  EPFTEQLLERGVVVVPFATDVSSLNFEFDEREDL-KDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRVRGSGVGYPPWNALVA
        + +T+ L+ERGVVVV +ATD +S   EFDE +   ++++ +RK+LWR+TPV++PEW  WL+EQKKLA VS++SPVYLSLR+DGRVR SGVGYPPW A VA
Subjt:  EPFTEQLLERGVVVVPFATDVSSLNFEFDEREDL-KDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRVRGSGVGYPPWNALVA

Query:  QLPPVKGLWSGLLDGMDGRV
        QLPPVKG+W+GLLDGMDGRV
Subjt:  QLPPVKGLWSGLLDGMDGRV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTAGTTTCCATGGCGAACATTTCCTCCTTCAACAATACTGGTCCACCTCCACATTCTCCTCGCACTCGCAGCCACAACGCTCACAATTTCAAATTCTATCGCCTTAT
CTGCTGCCGCGTCCATTGGAAGACGGTCTTCTTCTCTTCTGGCCCTAGTCTGGCTGAATCGCTTCGTCCTCTGCAGCCCATGAGACGGAATTTAGCCAACTTCACTTGCT
CCGCTGCTGAAAAACCGGAAATCAGTTCCACGGCCAAGATAAGAAGTGAAGTTCTCTCTCCTTTTCGATCCGTTCGGATGTTCTTTTATCTCACTTTCATTGCCAGTGGT
ACATTGGGAGGACTGATTGCAACCACTCAATTGCTAGCTGCATTGGCAAATTCATCAAGAGCTGAACAAGTCCCTGATATTCTAAAAGGACTTGGAATAGACTTCGGAGC
CGTAGCTCTTTTTGCATTTCTTTACTTCAGAGAGAACAATGCGAAAAATGCTCAGTTGGCAAGACTTTCAAGAGAAGAAAGTCTTTCGAATCTGAAGCTTCGAGTGGACC
AAAGCAAAGTTATTCCTCTCAACTCTCTGCGTGGGATTGCTCGTCTGGTAATTTGTGCTGGCCCTGAATCCTTTATCATGGAAGCTTTTAGATCAAGTGAACCTTTCACT
GAACAACTTCTAGAACGGGGCGTGGTAGTCGTACCCTTTGCCACAGATGTCAGTTCCCTGAATTTTGAGTTTGATGAACGTGAAGATTTGAAGGATGTAACCACCAAAAG
AAAAAGACTCTGGCGGTTGACTCCAGTTTACATGCCCGAGTGGTCGGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTATCCACCGAGTCTCCTGTGTATTTATCAC
TGCGAATGGACGGCCGTGTTCGTGGTAGCGGTGTTGGTTATCCTCCTTGGAATGCTCTTGTTGCACAACTACCACCTGTGAAAGGGCTATGGTCAGGTCTTCTAGATGGA
ATGGATGGAAGAGTTCTTTGA

mRNA sequence

Show/hide mRNA sequence

CAATCTGTAAATGAACAAAATCCAAATTCAGTTAACACAATGAATACCAATAAATACTGTTCCTAACTATTCAACAGAAACCACCGCTGACACAGAACCGTCGTCAAATT
CTGAAAACAAGGAATTGAAGACCTGTAGTCTCATCGTGGAAGAAGTTTAATTTGAAATCGTGGTAACACAATGACTACAGATAAAAGTATCGAGAGAGATTAATCAAATC
GAGATATAACAAAACAAGACACAAGTCGGCAATGGATGAATCAAATCAAATCGATCAACTAAAAGCTTAAACACCTAATCTAATTAGATCGACGAATGAAAAGCATTTTA
GCCTAATCGATACTGAGCAATCGCGATTATTAACTTAAGAACTATTTGATTTCCTCGTCGACTAATCAAAACCGTACGGCGTACAGTAATTAGGAAATATGAAATTTAGC
AATCGCGATCGTTGTTCAAGAAGCTACTTGATTTCCTTGTCGACTAATAAAATCGTACAGTAATTAGGAAATGTAAGACCTAGCAATCAATCGCAATACCTCATTCAGAA
ACTATTTGATTTCCTCGTCGACTAATCTAAACCGTACAGTAATAAGGAATATGAAACCTAGCAATCGCGATGGTTGTTTAAGAAAATATTCGATTTCCTCGTCGACTAAT
CAAAATCGTACAGTAATTAAGAATCATAGACCAAGCAATCAAGATTACTGATTAAAGAATAAAGGAATTACGAGGCCTGGCAATCACGATTACTGATCAAACTAGAAATT
GTTTGGTTTTCTGAAAAGTAAATCACCAATAACCAATCACCAGCTCATACAATGAATCGATAAAAGATCATTCATAATCCATCATACCTGTCTTCTTCCGATTCCGCGAT
TCTTGATTTCGAACCATAATCTCATCGCACTTCTGGTCAGAGCAATCTCAAAAACCAAAAACTATCGGAAGCATATTTTGTAGCGTTCAACTCGTTTCCAAGTTCCCGCT
CTTGCATTTATATAGAGTACTAGCGGAAGCGGTTGCAGGAGAAAATGGTAAAAAGGGGTTTTCCGTTTTGTATGGACGACACAACGACGCTGTAGACTATGGTTATTAAG
ACCTAGCCCAATATTGTAAGAGGTTTTATGGGCCTTAAGCCCAATATTGTAAGAGGCATTATGGGCCTCGAGCCCAGTACTCCTCTTTTTCATTTCTTCCTTGCGCCCAC
AGGCCCTTCAAGCTTCGCCGTCTGAGAGTTCTATGGTGCGGCAAATTCTGGGTATCGTGGCGCCATCGAGACCATCCCCGAAATTTGCTTCCATTGGCAAACTGAGAAAC
TACCTTAAATGTCAAGTGTAGTTTCTGGAGTGGACAATCATGGTAGTTTCCATGGCGAACATTTCCTCCTTCAACAATACTGGTCCACCTCCACATTCTCCTCGCACTCG
CAGCCACAACGCTCACAATTTCAAATTCTATCGCCTTATCTGCTGCCGCGTCCATTGGAAGACGGTCTTCTTCTCTTCTGGCCCTAGTCTGGCTGAATCGCTTCGTCCTC
TGCAGCCCATGAGACGGAATTTAGCCAACTTCACTTGCTCCGCTGCTGAAAAACCGGAAATCAGTTCCACGGCCAAGATAAGAAGTGAAGTTCTCTCTCCTTTTCGATCC
GTTCGGATGTTCTTTTATCTCACTTTCATTGCCAGTGGTACATTGGGAGGACTGATTGCAACCACTCAATTGCTAGCTGCATTGGCAAATTCATCAAGAGCTGAACAAGT
CCCTGATATTCTAAAAGGACTTGGAATAGACTTCGGAGCCGTAGCTCTTTTTGCATTTCTTTACTTCAGAGAGAACAATGCGAAAAATGCTCAGTTGGCAAGACTTTCAA
GAGAAGAAAGTCTTTCGAATCTGAAGCTTCGAGTGGACCAAAGCAAAGTTATTCCTCTCAACTCTCTGCGTGGGATTGCTCGTCTGGTAATTTGTGCTGGCCCTGAATCC
TTTATCATGGAAGCTTTTAGATCAAGTGAACCTTTCACTGAACAACTTCTAGAACGGGGCGTGGTAGTCGTACCCTTTGCCACAGATGTCAGTTCCCTGAATTTTGAGTT
TGATGAACGTGAAGATTTGAAGGATGTAACCACCAAAAGAAAAAGACTCTGGCGGTTGACTCCAGTTTACATGCCCGAGTGGTCGGCGTGGTTAGATGAACAAAAGAAGT
TGGCTGGAGTATCCACCGAGTCTCCTGTGTATTTATCACTGCGAATGGACGGCCGTGTTCGTGGTAGCGGTGTTGGTTATCCTCCTTGGAATGCTCTTGTTGCACAACTA
CCACCTGTGAAAGGGCTATGGTCAGGTCTTCTAGATGGAATGGATGGAAGAGTTCTTTGAAGAAAAACACTTGCTCTTCTTCCAACCTTCTGCTTCCTCAAATACCTATA
CTGGAGCTTCCCAGAGCCTTTACCATGGAGTGGAGCAAAGTTTTGCTATCATCTTTCTGTCATATCCAGCACAGAGTCACTGTAAAAGCTCCAACTCCATTGTCAATGGT
GGACTGCCTGAGAAATGGAACTGAATCTCGTGACAGCAGAATACAGGTTTTTTTGTAAAGAGATAAAAAGAAGAGGTTTAGCTTATGTGACATCTGGAATTTTATATTTG
ATCTAGAATCCAATATCCTTATTTATTAGTTATTATAGCTGCAGTAATTGTATTGTAAATCTATATATTGTTAATTGTTAGATGAATGTATATTCAAGTGCCTCAATAAA
TGGAAATCAAGTAATTATACATTTTCATTCAAATAATACTTTCTAGGCTGCTG

Protein sequence

Show/hide protein sequence

MVVSMANISSFNNTGPPPHSPRTRSHNAHNFKFYRLICCRVHWKTVFFSSGPSLAESLRPLQPMRRNLANFTCSAAEKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASG
TLGGLIATTQLLAALANSSRAEQVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQSKVIPLNSLRGIARLVICAGPESFIMEAFRSSEPFT
EQLLERGVVVVPFATDVSSLNFEFDEREDLKDVTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSTESPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLLDG
MDGRVL

MC06g1772 (gene) of Bitter gourd (Dali-11) v1 genome