; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g1783 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1783
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationMC06:25108816..25112801
RNA-Seq ExpressionMC06g1783
SyntenyMC06g1783
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0032544 - plastid translation (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057317.1 ribosome-recycling factor [Cucumis melo var. makuwa]2.68e-14683.7Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLER-----------GVVKAATIEEIEAEKTLIEKDVR
        L DYNGGLNCVKCG ++AH+ SW SA+NYVRL + AL++S+ + VSG++LKNR    FYF++FL             GVV+AATIEEIEAEKTLIEKDV+
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLER-----------GVVKAATIEEIEAEKTLIEKDVR

Query:  SRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR
        +RMEKTIDTVRSNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR
Subjt:  SRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR

Query:  KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEK
        KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEK
Subjt:  KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEK

XP_008449432.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X1 [Cucumis melo]8.12e-14785.98Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
        L DYNGGLNCVKCG ++AH+ SW SA+NYVRL + AL++S+ + VSG++LKNR            RGVV+AATIEEIEAEKTLIEKDV++RMEKTIDTVR
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR

Query:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
        SNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
Subjt:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA

Query:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

XP_022159166.1 ribosome-recycling factor, chloroplastic isoform X1 [Momordica charantia]3.36e-16295.08Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
        L DYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNR            RGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR

Query:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
        SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
Subjt:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA

Query:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

XP_038888223.1 ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida]6.37e-14786.74Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
        L DYN GLNCVKCG +T H+ SW SA+NYVRL R AL++S+ + VSG+LLKNR            RGVV+AATIEEIEAEKTLIEKDV++RMEKTIDTVR
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR

Query:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
        SNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
Subjt:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA

Query:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

XP_038888224.1 ribosome-recycling factor, chloroplastic isoform X2 [Benincasa hispida]5.04e-14686.36Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
        L DYN GLNCVKCG +T H+ SW SA+NYVRL R AL++S+ + VSG+LLKNR             GVV+AATIEEIEAEKTLIEKDV++RMEKTIDTVR
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR

Query:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
        SNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
Subjt:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA

Query:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

TrEMBL top hitse value%identityAlignment
A0A0A0KJG4 Ribosome-recycling factor, chloroplastic1.86e-14585.98Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
        L DYNGGLNCVKCG  TAH+ SW SA+NYVRL R AL+IS+ + VSG++ KNR            R VV+AATIEEIEAEKTLIEKDV++RMEKTIDTVR
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR

Query:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
        SNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
Subjt:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA

Query:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

A0A1S3BMN4 Ribosome-recycling factor, chloroplastic3.93e-14785.98Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
        L DYNGGLNCVKCG ++AH+ SW SA+NYVRL + AL++S+ + VSG++LKNR            RGVV+AATIEEIEAEKTLIEKDV++RMEKTIDTVR
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR

Query:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
        SNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
Subjt:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA

Query:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

A0A1S3BMY6 Ribosome-recycling factor, chloroplastic3.11e-14685.61Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
        L DYNGGLNCVKCG ++AH+ SW SA+NYVRL + AL++S+ + VSG++LKNR             GVV+AATIEEIEAEKTLIEKDV++RMEKTIDTVR
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR

Query:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
        SNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
Subjt:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA

Query:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

A0A5A7URP7 Ribosome-recycling factor, chloroplastic1.30e-14683.7Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLER-----------GVVKAATIEEIEAEKTLIEKDVR
        L DYNGGLNCVKCG ++AH+ SW SA+NYVRL + AL++S+ + VSG++LKNR    FYF++FL             GVV+AATIEEIEAEKTLIEKDV+
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLER-----------GVVKAATIEEIEAEKTLIEKDVR

Query:  SRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR
        +RMEKTIDTVRSNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR
Subjt:  SRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR

Query:  KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEK
        KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEK
Subjt:  KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEK

A0A6J1DZ32 Ribosome-recycling factor, chloroplastic1.63e-16295.08Show/hide
Query:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
        L DYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNR            RGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR
Subjt:  LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVR

Query:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
        SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA
Subjt:  SNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA

Query:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

SwissProt top hitse value%identityAlignment
A2YMU2 Ribosome-recycling factor, chloroplastic6.9e-7875Show/hide
Query:  ERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS
        +R V++ ATIEEIEAEK++IE   R RMEK I+TV++NFN++RTGRANP+MLD+IEVEYYG+PV+LKSIAQI+TPDA+SLL+QPYDKSSLK IEK IV +
Subjt:  ERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS

Query:  DLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        +LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS+DLQK+TD+YMKKI+ I KQKE+EL+K+
Subjt:  DLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

A3BLC3 Ribosome-recycling factor, chloroplastic6.9e-7875Show/hide
Query:  ERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS
        +R V++ ATIEEIEAEK++IE   R RMEK I+TV++NFN++RTGRANP+MLD+IEVEYYG+PV+LKSIAQI+TPDA+SLL+QPYDKSSLK IEK IV +
Subjt:  ERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS

Query:  DLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        +LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS+DLQK+TD+YMKKI+ I KQKE+EL+K+
Subjt:  DLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

P37706 Ribosome-recycling factor, chloroplastic (Fragment)2.7e-8268.6Show/hide
Query:  WNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVE
        W +AANYV++K      +   +V   L + R             G +K AT+EEIEAEK+LIEK V+ RMEKTI+ V+++FNSIRT R+NP MLDKI+VE
Subjt:  WNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVE

Query:  YYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLE
        YYG+P SLKSIAQISTPD+SSLLV PYDKSSLK IEKAIVNSDLG+TPNNDG+VIRL++PQLT++RRKELSK+VAKQAEEGKVA+RNIRRDA+K+Y+KLE
Subjt:  YYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLE

Query:  KEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        KEKKLSEDNVKDLSSDLQK+ D+Y+KK+D I+KQKEKEL+ V
Subjt:  KEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

P82231 Ribosome-recycling factor, chloroplastic4.0e-8667.05Show/hide
Query:  GLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSI
        G++ ++C +   +V  W S+ANYVR+       S   +V    L+NR G F            + AT+EE+EAEK+LIE + + RMEKTI+T+RSNFNS+
Subjt:  GLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSI

Query:  RTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVA
        RT RA+P+MLD+IEVEYYG+PVSLKSIAQISTPDASSLL+ PYDKSSLK+IEKAIV S LG++PNNDGEVIRL+LP LTS+RRKEL+KVV+K AEEGKVA
Subjt:  RTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVA

Query:  VRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        VRNIRRDALK+YEKLEKEKKLSEDNVKDLS+DLQKLTD+YMKK++ IYKQKE+EL+KV
Subjt:  VRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

Q9M1X0 Ribosome-recycling factor, chloroplastic1.4e-8382.5Show/hide
Query:  ERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS
        +R V+++ATIEEIEAEK+ IE DV+S+MEKTI+T+R++FNSIRTGR+N +MLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNS
Subjt:  ERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS

Query:  DLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        DLG+TPNNDG+VIRL+LP LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ +YKQKEKEL+KV
Subjt:  DLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor2.9e-2338.95Show/hide
Query:  SRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR
        S+ME  ID +  +   +RTGRA P MLD I VE  G  + L  +A +S  D  +L V PYD  ++K +EKAIV S LGL P  DG+ +  ++P LT E  
Subjt:  SRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR

Query:  KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKEL
        + + K+V K +E  K ++R  R+ AL   +K      L +D VK L  ++ +LT  ++K  + + K KEKE+
Subjt:  KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKEL

AT3G63190.1 ribosome recycling factor, chloroplast precursor1.0e-8482.5Show/hide
Query:  ERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS
        +R V+++ATIEEIEAEK+ IE DV+S+MEKTI+T+R++FNSIRTGR+N +MLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNS
Subjt:  ERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS

Query:  DLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        DLG+TPNNDG+VIRL+LP LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ +YKQKEKEL+KV
Subjt:  DLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTTAGATTATAATGGAGGGTTAAATTGCGTCAAATGTGGGTTGAATACGGCGCATGTTTATTCATGGAACTCTGCTGCAAACTATGTCAGACTCAAGCGGCATGCCCT
AATGATCTCTTCCCACGTCATTGTTTCTGGGAGTCTGTTGAAAAACAGGCAAGGGAATTTCTTCTATTTCATTCACTTTCTTGAAAGAGGAGTTGTGAAGGCTGCAACTA
TCGAAGAAATTGAAGCGGAGAAAACCTTGATTGAGAAAGATGTAAGATCAAGGATGGAAAAGACTATCGACACAGTTCGGTCTAATTTCAACTCAATTAGGACCGGGAGA
GCAAACCCTTCAATGCTCGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCCCAAATTAGTACACCTGATGCCAGCTCTCTCTTGGTCCA
GCCATACGATAAATCTAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAGGTCATACGGTTAACTCTCCCTCAAC
TTACATCCGAAAGAAGGAAGGAGTTGTCCAAAGTTGTTGCAAAGCAGGCAGAGGAAGGGAAGGTGGCAGTTAGGAATATAAGAAGAGATGCTTTGAAAGCCTATGAAAAA
CTCGAGAAGGAGAAAAAACTTTCAGAAGATAATGTAAAGGACTTGTCAAGTGATTTGCAGAAACTAACTGATGACTATATGAAGAAGATTGATGTCATATACAAGCAGAA
AGAGAAGGAGTTGTTAAAGGTGTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTAGATTATAATGGAGGGTTAAATTGCGTCAAATGTGGGTTGAATACGGCGCATGTTTATTCATGGAACTCTGCTGCAAACTATGTCAGACTCAAGCGGCATGCCCT
AATGATCTCTTCCCACGTCATTGTTTCTGGGAGTCTGTTGAAAAACAGGCAAGGGAATTTCTTCTATTTCATTCACTTTCTTGAAAGAGGAGTTGTGAAGGCTGCAACTA
TCGAAGAAATTGAAGCGGAGAAAACCTTGATTGAGAAAGATGTAAGATCAAGGATGGAAAAGACTATCGACACAGTTCGGTCTAATTTCAACTCAATTAGGACCGGGAGA
GCAAACCCTTCAATGCTCGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCCCAAATTAGTACACCTGATGCCAGCTCTCTCTTGGTCCA
GCCATACGATAAATCTAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAGGTCATACGGTTAACTCTCCCTCAAC
TTACATCCGAAAGAAGGAAGGAGTTGTCCAAAGTTGTTGCAAAGCAGGCAGAGGAAGGGAAGGTGGCAGTTAGGAATATAAGAAGAGATGCTTTGAAAGCCTATGAAAAA
CTCGAGAAGGAGAAAAAACTTTCAGAAGATAATGTAAAGGACTTGTCAAGTGATTTGCAGAAACTAACTGATGACTATATGAAGAAGATTGATGTCATATACAAGCAGAA
AGAGAAGGAGTTGTTAAAGGTGTGACCAAGAGCAACGATTGAGAGAAGTTCTCCTGATGGTGTGAATTTTTAAATTGTATTTCAGGAGTTGTTGAAGGTGTGACCAAGAG
CAAACGATAGAGAGAAGTTCCCGGTGTGAATTGTGAAATATCACATCTCTGGTTTTTCCAAGAATAGAGTTTTAAAAATCTCATTGTTAGAATCAAACCCCCATTTATTT
TTTTTCTTTTTCTTTGGTTGAAATGAGATACACCGCCTTATGGGAAATGGTAAATATCTCAAATCTCTCACTCTGTACATTGAAACTGGATATTATCATCACTCACACAT
TTTGATTCTCAC
Protein sequenceShow/hide protein sequence
LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGR
ANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEK
LEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV