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MC06g1827 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1827
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-H2 finger protein ATL2-like
Genome locationMC06:25572383..25572526
RNA-Seq ExpressionMC06g1827
SyntenyMC06g1827
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159502.1 RING-H2 finger protein ATL2-like [Momordica charantia]1.86e-28100Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
        CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL

XP_022996076.1 RING-H2 finger protein ATL46-like [Cucurbita maxima]6.42e-2380.85Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML
        CTICL +ME+SE MREL NCCHVFH++CLDTWIDEF+ITCP+CRSML
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML

XP_023520502.1 RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]1.25e-2283.33Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
        CTICLS+ME+SE MREL NC HVFH+ECLDTWIDEFQITCP+CRS LL
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL

XP_023533023.1 RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]5.70e-2282.22Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS
        CTICL +ME+SE MRELSNCCHVFH +CLDTWIDEF+ITCP+CRS
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS

XP_038907243.1 RING-H2 finger protein ATL2-like [Benincasa hispida]1.25e-2277.08Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
        CT+CL +ME+SE MREL NCCHVFH+EC D WIDEFQITCP+CRS+LL
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL

TrEMBL top hitse value%identityAlignment
A0A1R3K6P6 Zinc finger, RING-type9.13e-2070.21Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML
        CT+CL  ME+++KMREL NC HVFH+ECLDTW+DE Q+TCP+CRS L
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML

A0A438DBU0 E3 ubiquitin-protein ligase RHA1B1.75e-2070.21Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML
        C++CL  +++S ++RELSNCCHVFHKECLDTW+DE Q+TCP+CRSML
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML

A0A6J1AZI3 E3 ubiquitin-protein ligase RHA2B-like1.55e-1970.21Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML
        CT+CL  MEKSE++R L  CCHVFHKECLDTW++E Q+TCP+CRS L
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML

A0A6J1E009 RING-H2 finger protein ATL2-like9.02e-29100Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
        CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL

A0A6J1K3P6 RING-H2 finger protein ATL46-like3.11e-2380.85Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML
        CTICL +ME+SE MREL NCCHVFH++CLDTWIDEF+ITCP+CRSML
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML

SwissProt top hitse value%identityAlignment
Q9SLC3 E3 ubiquitin-protein ligase ATL411.1e-0848.89Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS
        C +CLS +++ +K REL NC H+FH +C+DTW+     TCP+CR+
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS

Q9SUS5 E3 ubiquitin-protein ligase RHA1B6.2e-0955.1Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWI-DEFQITCPICRSMLL
        CT+CLS     +K+R+L  C HVFH  CLD WI D  +ITCPICR+  L
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWI-DEFQITCPICRSMLL

Q9XF92 Brassinosteroid-responsive RING protein 13.6e-0948.89Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS
        C +CL + E  +++R L NC H+FH+ CLD W+D  Q TCP+CR+
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS

Q9ZT50 E3 ubiquitin-protein ligase RHA2A3.3e-1052.08Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
        C +CLSK+++ E++R+L  C HVFHK+CL+ W+ +F  TCP+CRS L+
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL

Q9ZU51 E3 ubiquitin-protein ligase RHA2B6.2e-0950Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
        C +CLSK++  E++R+L +C HVFHK+CL+ W+      CP+CRS LL
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A2.3e-1152.08Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL
        C +CLSK+++ E++R+L  C HVFHK+CL+ W+ +F  TCP+CRS L+
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL

AT2G42360.1 RING/U-box superfamily protein7.5e-1048.89Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS
        C +CLS +++ +K REL NC H+FH +C+DTW+     TCP+CR+
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS

AT3G43430.1 RING/U-box superfamily protein5.7e-1042.86Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWI--------DEFQITCPICRSMLL
        C +CL  +E  +++REL NC HVFH++C+D W+        D+   TCP+CR+ LL
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWI--------DEFQITCPICRSMLL

AT3G60220.1 TOXICOS EN LEVADURA 47.5e-1051.06Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML
        C +CLSK E  +++R L  CCH FH +C+D W+   Q TCP+CRS L
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML

AT3G61460.1 brassinosteroid-responsive RING-H22.6e-1048.89Show/hide
Query:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS
        C +CL + E  +++R L NC H+FH+ CLD W+D  Q TCP+CR+
Subjt:  CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTACGATCTGCTTGAGTAAAATGGAGAAATCGGAGAAGATGAGAGAGCTCTCCAATTGCTGCCATGTCTTCCACAAGGAGTGTTTGGATACGTGGATAGACGAATTCCA
GATTACTTGCCCTATTTGTAGATCCATGCTTTTG
mRNA sequenceShow/hide mRNA sequence
TGTACGATCTGCTTGAGTAAAATGGAGAAATCGGAGAAGATGAGAGAGCTCTCCAATTGCTGCCATGTCTTCCACAAGGAGTGTTTGGATACGTGGATAGACGAATTCCA
GATTACTTGCCCTATTTGTAGATCCATGCTTTTG
Protein sequenceShow/hide protein sequence
CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL