CuGenDBv2

Gene ID	MC06g1931
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NERD domain-containing protein
Genome location	MC06:26726704..26735907
RNA-Seq Expression	MC06g1931
Synteny	MC06g1931
Gene Ontology terms	NA
InterPro domains	IPR011528 - Nuclease-related domain, NERD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148346.1 uncharacterized protein LOC101206635 isoform X1 [Cucumis sativus]

6.30e-195

83.85

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        MWAEILCGF+AFRVLRRFF P+DEMEIE  DS+A+FA ASRLEKLYGG+ F+GLRIPDADTG RQSIDMVLVTKG+AVVI VKNLSG VS+SADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDG Q+SEI+PDPV ETRRW SILESY EQRGVALPEGYLS KVLLPNPKFRT+H NYFPSEV+ YDQ+I LKPEPKS FSGWIK A  GGKKEMQ+SMD
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        QKLNFVLNTAPMWDRLEL GNN +LGEF+EFK KKEDMQALR+I+RSKVSCI+IQ++R I FVPSRFRVLYS RDYRN GASASEWKEVTVGSST+VVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRK+KIS+I SLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

XP_022157167.1 uncharacterized protein LOC111023945 [Momordica charantia]

1.61e-229

99.69

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRN+GASASEWKEVTVGSSTVVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRKIKISTIASLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

XP_022957721.1 uncharacterized protein LOC111459180 [Cucurbita moschata]

6.02e-193

82.61

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        M+ EILCGFIAFR+LRRFF  +DE+EIE SDSNA+FA ASRLEK+Y G++F+GLRIPDADTG RQSIDMVLVTKG+AVV+ VKNLSG VS+SADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ++QLKPEPKS FSGWIK ALRGGKKE+QES D
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        +KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R+Y+N G SASEWKE+T+GS+T+VVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRKIKIS+I SLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

XP_022995191.1 uncharacterized protein LOC111490811 [Cucurbita maxima]

8.55e-193

82.92

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        MW EILCGFIAFR+LRRFF   D +EIE SDSNA+FA ASRLEK+Y G++F+GLRIPDADTG RQSIDMVLVTKG+AVV+ VKNLSG VS+SADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ+IQLKPE KS FSGWIK ALRGGKKEMQES D
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        +KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R+Y+N G SASEWKE+T+GS+T+VVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRKIKIS+I SLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

XP_023534697.1 uncharacterized protein LOC111796185 [Cucurbita pepo subsp. pepo]

7.01e-192

81.99

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        M+ EILCGFIAFR+LRRFF  +DE+EIE SDSNA+FA ASRLEK+Y G++F+GLRIPDADTG RQSIDMVLVTKG+AVV+ VKN+SG VS+SADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ++QLKPEPKS FSGWIK ALRGGKKE+QES D
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        +KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQ LR+IKRSKVSCIVIQ+MR I F PSR RVLYS R+Y+N G SASEWKE+T+GS+T+VVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRKIKIS+I SLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKG9 NERD domain-containing protein

3.05e-195

83.85

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        MWAEILCGF+AFRVLRRFF P+DEMEIE  DS+A+FA ASRLEKLYGG+ F+GLRIPDADTG RQSIDMVLVTKG+AVVI VKNLSG VS+SADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDG Q+SEI+PDPV ETRRW SILESY EQRGVALPEGYLS KVLLPNPKFRT+H NYFPSEV+ YDQ+I LKPEPKS FSGWIK A  GGKKEMQ+SMD
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        QKLNFVLNTAPMWDRLEL GNN +LGEF+EFK KKEDMQALR+I+RSKVSCI+IQ++R I FVPSRFRVLYS RDYRN GASASEWKEVTVGSST+VVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRK+KIS+I SLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

A0A6J1DTU9 uncharacterized protein LOC111023945

7.78e-230

99.69

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRN+GASASEWKEVTVGSSTVVVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRKIKISTIASLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

A0A6J1H014 uncharacterized protein LOC111459180

2.91e-193

82.61

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        M+ EILCGFIAFR+LRRFF  +DE+EIE SDSNA+FA ASRLEK+Y G++F+GLRIPDADTG RQSIDMVLVTKG+AVV+ VKNLSG VS+SADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ++QLKPEPKS FSGWIK ALRGGKKE+QES D
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        +KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R+Y+N G SASEWKE+T+GS+T+VVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRKIKIS+I SLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

A0A6J1K1B0 uncharacterized protein LOC111490811

4.14e-193

82.92

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        MW EILCGFIAFR+LRRFF   D +EIE SDSNA+FA ASRLEK+Y G++F+GLRIPDADTG RQSIDMVLVTKG+AVV+ VKNLSG VS+SADGSWICE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        GDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ+IQLKPE KS FSGWIK ALRGGKKEMQES D
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        +KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R+Y+N G SASEWKE+T+GS+T+VVFQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
        MEYSSKVRKIKIS+I SLSLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

A0A6P9DW32 uncharacterized protein LOC109012405

1.17e-162

70.5

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Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        MW EI CG I +R+ R FF   D +++E SDS A+F+ A+RLEKLY G+V++GLRIPDADTGSRQ+IDMVLVTKG+AVVISV NLSG VS++ADGSW+CE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        G    R+E + DPVVET+R ASILESYLEQRGVALPEGYLSCKV+LPNPK   +H +YFPSEV+TYDQ++QLKPEPKS FSGW+KGA RGGKKEMQES+ 
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        QKLNF+L TAPMWDRLELKGN + LGEF+EFKGK+ED+QAL+ IKRSKVS +VIQ+  M    PS  +VLYS RDYR+ GASASEWKEVTV SST V+FQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
         E S+KVRK K+S++ SL L+A
Subjt:  MEYSSKVRKIKISTIASLSLSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

5.0e-110

60.25

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE
        MW EI+CG + ++++RRFF   +  ++E SDS A+F+ A RLEKLYGG+ ++GLRIPDADT SRQ ID+VLVTKGD VVISVKNLSG+V++++DGSW+CE
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICE

Query:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD
        G     +E  PDP+ E ++ AS+LESYLEQRGV L EG +SCKV++PNP FRT+H   FPSEV+TY+ + QLKP  KS  SGW+KGA   G KEMQES  
Subjt:  GDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMD

Query:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ
        QKLNF+L TAP WDR+ELK +  +LGEF+EFKGK+ED  ALR+IKRSKV  + IQ+  M    PSR +VLYS RDYR+ G+S +E KEVTV SST V+FQ
Subjt:  QKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQ

Query:  MEYSSKVRKIKISTIASLSLSA
           S+K++K K+S++ S+SLSA
Subjt:  MEYSSKVRKIKISTIASLSLSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGGCTGAGATACTCTGTGGTTTTATAGCGTTTAGAGTGCTCAGGCGATTCTTTTGTCCAAAGGATGAAATGGAGATCGAGGCCTCCGATTCTAATGCCATTTTCGC
TGCCGCTTCTAGATTAGAAAAGCTCTATGGTGGAAGGGTTTTTTTGGGGCTTCGAATTCCAGATGCTGACACTGGTTCGCGACAGAGTATTGATATGGTTCTTGTAACTA
AAGGGGATGCAGTGGTGATATCTGTAAAAAATCTTTCAGGTTTGGTTTCCATCAGTGCTGATGGAAGCTGGATCTGTGAAGGTGATGGTACACAAAGGTCAGAGATTATG
CCTGATCCAGTGGTTGAGACACGAAGATGGGCCTCAATTCTCGAGTCATACCTTGAACAGAGAGGAGTTGCGCTGCCAGAAGGATATTTATCGTGTAAAGTTTTGCTTCC
CAATCCAAAATTTCGAACAGTTCATTTGAACTATTTTCCTTCTGAAGTCGTCACATATGATCAGTATATACAGTTGAAACCAGAACCAAAAAGTACGTTCTCCGGTTGGA
TCAAGGGTGCTTTGCGTGGAGGAAAAAAAGAGATGCAGGAATCTATGGATCAGAAGCTAAATTTTGTCCTCAACACTGCACCCATGTGGGATAGGCTGGAACTTAAAGGA
AATAATTTTATTCTGGGAGAATTCATGGAGTTCAAAGGGAAAAAGGAAGATATGCAGGCTTTGAGAGATATCAAAAGATCAAAAGTTAGTTGCATAGTCATCCAGAGGAT
GAGAATGATCAGATTTGTTCCTTCAAGATTTCGAGTTTTATACTCTGCTCGGGATTATCGAAACAACGGGGCCTCTGCTTCTGAGTGGAAGGAAGTAACGGTAGGATCCA
GTACAGTGGTAGTATTTCAGATGGAATATTCTTCTAAAGTTCGAAAAATCAAGATCTCTACAATTGCATCTCTGTCATTGAGTGCCTGA

mRNA sequence

Show/hide mRNA sequence

GTATAGATAGAGCCACCCCTTTAATTAATATCTGATTTCGAGAATAGAATAAATTCAATTTTTTTTAAAAAGAATAAAACTATAGTTTTTGAACGGCTGTTTTCTGATTT
GTTCCATTAATATTTATGAGAACATACCTCGTGATACTATTCGAAGAACAGGGTTTTCTAGTTGCCTCGCCTCGATCGAGAAAGTTTTCCCTGTCATGTGGGCTGAGATA
CTCTGTGGTTTTATAGCGTTTAGAGTGCTCAGGCGATTCTTTTGTCCAAAGGATGAAATGGAGATCGAGGCCTCCGATTCTAATGCCATTTTCGCTGCCGCTTCTAGATT
AGAAAAGCTCTATGGTGGAAGGGTTTTTTTGGGGCTTCGAATTCCAGATGCTGACACTGGTTCGCGACAGAGTATTGATATGGTTCTTGTAACTAAAGGGGATGCAGTGG
TGATATCTGTAAAAAATCTTTCAGGTTTGGTTTCCATCAGTGCTGATGGAAGCTGGATCTGTGAAGGTGATGGTACACAAAGGTCAGAGATTATGCCTGATCCAGTGGTT
GAGACACGAAGATGGGCCTCAATTCTCGAGTCATACCTTGAACAGAGAGGAGTTGCGCTGCCAGAAGGATATTTATCGTGTAAAGTTTTGCTTCCCAATCCAAAATTTCG
AACAGTTCATTTGAACTATTTTCCTTCTGAAGTCGTCACATATGATCAGTATATACAGTTGAAACCAGAACCAAAAAGTACGTTCTCCGGTTGGATCAAGGGTGCTTTGC
GTGGAGGAAAAAAAGAGATGCAGGAATCTATGGATCAGAAGCTAAATTTTGTCCTCAACACTGCACCCATGTGGGATAGGCTGGAACTTAAAGGAAATAATTTTATTCTG
GGAGAATTCATGGAGTTCAAAGGGAAAAAGGAAGATATGCAGGCTTTGAGAGATATCAAAAGATCAAAAGTTAGTTGCATAGTCATCCAGAGGATGAGAATGATCAGATT
TGTTCCTTCAAGATTTCGAGTTTTATACTCTGCTCGGGATTATCGAAACAACGGGGCCTCTGCTTCTGAGTGGAAGGAAGTAACGGTAGGATCCAGTACAGTGGTAGTAT
TTCAGATGGAATATTCTTCTAAAGTTCGAAAAATCAAGATCTCTACAATTGCATCTCTGTCATTGAGTGCCTGAAGGTGTCTGGTCAGTTTTGTATTTTTTTTATTATTA
TTTTTTAAATTTTGATCATAACTCTCCTGAGATTGATTGAGCTGGGAAGATAAAACTATATTTTTTTTCACCTTTTTTTGGTTCCTTTCTATAATTTTTTATGGTCATTG
TTCCTTCTTCAACGGGTTTTTATCATATCAAGCCGAGGCTGCTGTGTCAGAAACTTGAACAGTAAATGTCTTCAAATTAGTGTATATCTGATATATATATATAGTAGTTA
CATGTGTTTTTAATACCTCTAGTGATTTATTGTTGACATGAAACTCTACTTTAAATGGATA

Protein sequence

Show/hide protein sequence

MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKNLSGLVSISADGSWICEGDGTQRSEIM
PDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKG
NNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNNGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

MC06g1931 (gene) of Bitter gourd (Dali-11) v1 genome