; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g1972 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1972
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionserine/arginine-rich splicing factor RS40-like
Genome locationMC06:27235908..27239255
RNA-Seq ExpressionMC06g1972
SyntenyMC06g1972
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449100.1 PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo]4.77e-21989.21Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGG GGGGG    SRR
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRR

Query:  SSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLF+INFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH
        RKRRSPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSDHVR  PS+ P  HQRER NDDRV 
Subjt:  RKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH

Query:  NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE
        NRS SPYGRER  GSPTDGRG+SYSP RDRERS NPDNGH+    Q+ N   EPG+SPNYG TQSPKHRGY+S  PQAEE
Subjt:  NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE

XP_011650503.1 serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]2.06e-21788.38Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREFGRKGRRLRVEWTKQERGIRRP GGGGG GGG  SRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLF+INFDPYHTR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRS
        SPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSPYQR R  GSPDY RGRSP HSPYRRERERSSDH+R PSHSP PHQRER NDDR+ NRS S
Subjt:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRS

Query:  PYGRER--GSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE
        PY RER  GSP  GRG SYSP RDRER NPDNGH+ + NT AEPG+ P+Y GTQSPKHRGYNS  PQAEE
Subjt:  PYGRER--GSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE

XP_022159582.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia]1.92e-24496.17Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGG    GGSRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLF+INFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPY
        SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR SPDYGRGRSPNHSPYRRERERSSDHVRPPSHSP PHQRERANDDRVHNRSRSPY
Subjt:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPY

Query:  GRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE
        GRERGSPTDGRG+SYSPPRD ERSNPDNGHEQRLNT AEPGDSP+YGGTQSP HRGYNS  PQAEE
Subjt:  GRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE

XP_022159586.1 serine/arginine-rich splicing factor RS40-like [Momordica charantia]2.18e-22999.4Show/hide
Query:  MKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKI
        M  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKI
Subjt:  MKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKI

Query:  LSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDY
        LSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDY
Subjt:  LSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDY

Query:  GSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ
        GSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ
Subjt:  GSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ

Query:  RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE
        RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE
Subjt:  RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE

XP_038904888.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida]8.41e-23192.68Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGG GGG GGGGGSRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLF+INFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRS
        SPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSD VR PSHSP PHQRER NDDRVHNRS S
Subjt:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRS

Query:  PYGRERGSPTDGRGSSYSPPRDRERS-NPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE
        PYGRERGSPTDGRG+SYSP RDRERS NPDNGH+Q+ NT  EPG+SP+YGGTQSPKHRGY S  PQAEE
Subjt:  PYGRERGSPTDGRGSSYSPPRDRERS-NPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE

TrEMBL top hitse value%identityAlignment
A0A0A0L2A0 Uncharacterized protein1.44e-21788.92Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPG----GGGGGVGGGGGSRR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPG    GGGGG GGGGGSRR
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPG----GGGGGVGGGGGSRR

Query:  SSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLF+INFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHN
        RKRRS SPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSDHVR PSH P  HQRER NDDRV N
Subjt:  RKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHN

Query:  RSRSPYGR--ERGSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE
        RS SPYGR  E+GSP DGRG+SYSP RDRERS NPDNGH+    Q+  T  EPG+SPNYGGTQSPK RGY S  PQAEE
Subjt:  RSRSPYGR--ERGSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE

A0A1S4DXA1 serine/arginine-rich splicing factor RS40-like isoform X12.31e-21989.21Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGG GGGGG    SRR
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRR

Query:  SSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLF+INFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH
        RKRRSPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSDHVR  PS+ P  HQRER NDDRV 
Subjt:  RKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH

Query:  NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE
        NRS SPYGRER  GSPTDGRG+SYSP RDRERS NPDNGH+    Q+ N   EPG+SPNYG TQSPKHRGY+S  PQAEE
Subjt:  NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE

A0A5A7VJB8 Serine/arginine-rich splicing factor RS40-like isoform X12.31e-21989.21Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRR
        MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGG GGGGG    SRR
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGG----SRR

Query:  SSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD
        SSTNTRPSKTLF+INFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+KRNGYSPDRNRDRSPD
Subjt:  SSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPD

Query:  RKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH
        RKRRSPSPYRRERGSPDYGNGI+RSPYRRQRASPDYGSRRSPSPYQR R  GSPDYGRGRSPNHSPYRRERERSSDHVR  PS+ P  HQRER NDDRV 
Subjt:  RKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR--GSPDYGRGRSPNHSPYRRERERSSDHVR-PPSHSPHPHQRERANDDRVH

Query:  NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE
        NRS SPYGRER  GSPTDGRG+SYSP RDRERS NPDNGH+    Q+ N   EPG+SPNYG TQSPKHRGY+S  PQAEE
Subjt:  NRSRSPYGRER--GSPTDGRGSSYSPPRDRERS-NPDNGHE----QRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE

A0A6J1E078 serine/arginine-rich splicing factor RS40-like isoform X19.28e-24596.17Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGG    GGSRRSSTN
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
        TRPSKTLF+INFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPY
        SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNR SPDYGRGRSPNHSPYRRERERSSDHVRPPSHSP PHQRERANDDRVHNRSRSPY
Subjt:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPY

Query:  GRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE
        GRERGSPTDGRG+SYSPPRD ERSNPDNGHEQRLNT AEPGDSP+YGGTQSP HRGYNS  PQAEE
Subjt:  GRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSPKHRGYNS--PQAEE

A0A6J1E4D4 serine/arginine-rich splicing factor RS40-like1.06e-22999.4Show/hide
Query:  MKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKI
        M  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKI
Subjt:  MKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKI

Query:  LSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDY
        LSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDY
Subjt:  LSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITRSPYRRQRASPDY

Query:  GSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ
        GSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ
Subjt:  GSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQ

Query:  RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE
        RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE
Subjt:  RLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE

SwissProt top hitse value%identityAlignment
P92964 Serine/arginine-rich splicing factor RS315.6e-7055.21Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDERDAEDAIR LD   FG + RRL VEW K ERG  R            G  ++ +N
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         +P+KTLF+INFDP  T+  D+E+HF+PYGK+ +VRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+      DRN  RSP   RR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNH----SPYRRERERSSDHVRPPSHSPHPHQR
        S SP  R R SPDYG     SP + +R SPDYG  RSP  Y R +G   Y R RSP++    S Y R+R    D  R  S SP P  R
Subjt:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNH----SPYRRERERSSDHVRPPSHSPHPHQR

P92965 Serine/arginine-rich splicing factor RS403.4e-10761.73Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER        GG    GGGSRRSS++
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLF+INFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR
        SPSPY+RERGSPDYG G +  + YR++R SPDYG RRSPSPY+++ RGSP+YGR R  N SP RRER  S     P  +S  P ++RER +       + 
Subjt:  SPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR

Query:  SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE
        SP+ +E  SP +G G   SP   R+R RS+P+NG  +   +         Y G +SP  K R   SP A+E
Subjt:  SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE

P92966 Serine/arginine-rich splicing factor RS418.6e-10359.37Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +R         GG G  GGSRRSS+ 
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLF+INFD  +TRTRDLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP
        SPSPYRRERGSPDYG G +   ++R+R SPDYG  RRSPSPY+R R SPDY R         RRER  S ++    + SP   + E        +RS  P
Subjt:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP

Query:  YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP-KHRGYNSPQAEE
        Y + R S    P + R  S SPP         R R +S+P+NG  +      E      Y G  SP +     SP AEE
Subjt:  YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP-KHRGYNSPQAEE

Q08170 Serine/arginine-rich splicing factor 45.9e-1128.18Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        M  ++ G   Y AR+ D+ER F  YGK+  VD+K+G+ F+  +D RDA+DA+  L+ ++    G R+ VE     RG RR G  G G   G G RRS  +
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  T--RPSKTLFIINFDPYHTRT--RDLERHFDPYGKIL---SVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDR
            P++T + +  +   +R   +DL+ +    G++    + + R+N   +++    D  RALE  + +++  R I +    +    +R  YS  R+  R
Subjt:  T--RPSKTLFIINFDPYHTRT--RDLERHFDPYGKIL---SVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDR

Query:  SPDRKRRSPSPYRR---ERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYR---------RERERSSDHV-RPPSHSPH
        S  R R S     R    + S       +RS  R +  S      RS S  +++R SP   + RS +HS  +          E+ +++D+V +P S SP 
Subjt:  SPDRKRRSPSPYRR---ERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYR---------RERERSSDHV-RPPSHSPH

Query:  PHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGD
         H+ +  +  R  ++ R     +RGS + GR    S  + R RS    G   R  + ++  D
Subjt:  PHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGHEQRLNTAAEPGD

Q9ZPX8 Serine/arginine-rich splicing factor RS31A1.1e-6248.37Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-RPGGGGGGVGGGGGSRRSST
        M+ ++ GNF+YD R  DLERLF ++G+V RVDMKSG+AF+Y EDERDAEDAIR  D   FG   R+L VEW K  +G R +P  G           ++ +
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIR-RPGGGGGGVGGGGGSRRSST

Query:  NTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKR
        N RP+KTLF+INFDP  TR RD+ERHF+PYGK+L+VR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+ + Y        +  R+R
Subjt:  NTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKR

Query:  RSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP
        RSPSP  R R SPDY           +R SP+Y   + P+PY+R R SPDYGR              RSSD+ R  + SP             ++RSRSP
Subjt:  RSPSPYRRERGSPDYGNGITRSPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP

Query:  YGRERG
          R RG
Subjt:  YGRERG

Arabidopsis top hitse value%identityAlignment
AT4G25500.1 arginine/serine-rich splicing factor 352.4e-10861.73Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER        GG    GGGSRRSS++
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLF+INFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR
        SPSPY+RERGSPDYG G +  + YR++R SPDYG RRSPSPY+++ RGSP+YGR R  N SP RRER  S     P  +S  P ++RER +       + 
Subjt:  SPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR

Query:  SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE
        SP+ +E  SP +G G   SP   R+R RS+P+NG  +   +         Y G +SP  K R   SP A+E
Subjt:  SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE

AT4G25500.3 arginine/serine-rich splicing factor 353.2e-8959.82Show/hide
Query:  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSV
        GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER        GG    GGGSRRSS++ RPSKTLF+INFD  +TRTRDLE+HF+PYGKI++V
Subjt:  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSV

Query:  RIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGS
        RIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G +  + YR++R SPDYG 
Subjt:  RIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGS

Query:  RRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGH
        RRSPSPY+++ RGSP+YGR R  N SP RRER  S     P  +S  P ++RER +       + SP+ +E  SP +G G   SP   R+R RS+P+NG 
Subjt:  RRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGH

Query:  EQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE
         +   +         Y G +SP  K R   SP A+E
Subjt:  EQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE

AT4G25500.4 arginine/serine-rich splicing factor 352.4e-10861.73Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ER        GG    GGGSRRSS++
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLF+INFD  +TRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR
        SPSPY+RERGSPDYG G +  + YR++R SPDYG RRSPSPY+++ RGSP+YGR R  N SP RRER  S     P  +S  P ++RER +       + 
Subjt:  SPSPYRRERGSPDYGNGITR-SPYRRQRASPDYGSRRSPSPYQRN-RGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHP-HQRERANDDRVHNRSR

Query:  SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE
        SP+ +E  SP +G G   SP   R+R RS+P+NG  +   +         Y G +SP  K R   SP A+E
Subjt:  SPYGRERGSPTDGRGSSYSP--PRDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.1e-10459.37Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +R         GG G  GGSRRSS+ 
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLF+INFD  +TRTRDLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP
        SPSPYRRERGSPDYG G +   ++R+R SPDYG  RRSPSPY+R R SPDY R         RRER  S ++    + SP   + E        +RS  P
Subjt:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP

Query:  YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP-KHRGYNSPQAEE
        Y + R S    P + R  S SPP         R R +S+P+NG  +      E      Y G  SP +     SP AEE
Subjt:  YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP-KHRGYNSPQAEE

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-10359.21Show/hide
Query:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN
        MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+GR GRRLRVEWTK +R         GG G  GGSRRSS+ 
Subjt:  MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTN

Query:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR
         RPSKTLF+INFD  +TRTRDLERHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYSP+R RDRSPDR+RR
Subjt:  TRPSKTLFIINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRR

Query:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP
        SPSPYRRERGSPDYG G +   ++R+R SPDYG  RRSPSPY+R R SPDY R         RRER  S ++    + SP   + E        +RS  P
Subjt:  SPSPYRRERGSPDYGNGITRSPYRRQRASPDYG-SRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSP

Query:  YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE
        Y + R S    P + R  S SPP         R R +S+P+NG  +      E      Y G  SP  +     SP AEE
Subjt:  YGRERGS----PTDGRGSSYSPP---------RDRERSNPDNGHEQRLNTAAEPGDSPNYGGTQSP--KHRGYNSPQAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCCGATCTGGAAAGACTTTTTGGTAGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTTT
TGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTAGACCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAAC
AAGAGCGTGGCATTAGAAGACCAGGTGGTGGTGGTGGTGGAGTTGGAGGTGGAGGTGGTTCAAGGAGATCCTCTACTAATACAAGGCCTTCAAAGACTTTATTTATTATC
AACTTTGATCCATATCATACTAGGACGAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTCGCATTTGTCCAGTATGA
ATTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCGGTGGAATATGCTGTTCGAGATGATGACGAGAAAAGAAATG
GGTACAGTCCTGATAGGAATCGTGATAGATCTCCTGACAGAAAGCGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTACGGCAATGGTATTACCCGC
AGTCCATACAGGAGACAAAGGGCCAGTCCTGATTATGGCAGTCGTCGTAGCCCAAGTCCTTATCAGAGAAACAGGGGCTCTCCTGATTATGGCCGTGGTCGTAGCCCCAA
TCATAGTCCTTATAGACGGGAGAGAGAGAGATCAAGTGACCATGTTAGGCCCCCTAGCCATAGTCCCCATCCTCATCAGAGGGAAAGAGCAAACGATGACCGAGTCCACA
ACCGAAGTCGCAGTCCTTACGGGAGAGAAAGGGGGAGCCCTACTGATGGACGTGGCTCCAGCTATAGTCCTCCTCGTGATAGAGAGAGGTCAAACCCGGACAATGGTCAC
GAGCAGCGGCTAAATACAGCCGCAGAACCTGGGGATAGCCCCAATTATGGTGGGACTCAGAGCCCAAAGCATCGGGGATATAACAGCCCCCAAGCAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
AAATAGTTGAACTCAAATAAATGACTAAAAAAGTTATCCCGTAAATTAAAATTAGGGTTAGAAAAAAAGAAAAACCCTAAAAGCAGCTATTTTTCCCCTAGCCGCAGCCC
TCCCCCCGGTACGCAACTCTCTCTCTGCAGTTCCCTTCCCTCTCCGATACCGGCTACTGCGGCGGCACGACCAGGCGACGGCGATCCAGATCCTGCGGCGGCGCGATCAT
CCCTACCCGACGGCACTCGGCGAACACACCCGTTCGCGACCCGAAGCCCCCTGCGTCAGTCGACCTCCGACGAAGGGTAGTATGAAGCCGATTTTTTGTGGAAACTTTGA
GTATGATGCTCGACAGCCCGATCTGGAAAGACTTTTTGGTAGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTTTTGCTTTTATCTACATGGAGGATGAGAGAG
ATGCTGAGGATGCTATCCGTGCACTAGACCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCAGGTGGT
GGTGGTGGTGGAGTTGGAGGTGGAGGTGGTTCAAGGAGATCCTCTACTAATACAAGGCCTTCAAAGACTTTATTTATTATCAACTTTGATCCATATCATACTAGGACGAG
GGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTCGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAGAGCATTGG
AGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCGGTGGAATATGCTGTTCGAGATGATGACGAGAAAAGAAATGGGTACAGTCCTGATAGGAATCGTGATAGA
TCTCCTGACAGAAAGCGGCGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTACGGCAATGGTATTACCCGCAGTCCATACAGGAGACAAAGGGCCAGTCC
TGATTATGGCAGTCGTCGTAGCCCAAGTCCTTATCAGAGAAACAGGGGCTCTCCTGATTATGGCCGTGGTCGTAGCCCCAATCATAGTCCTTATAGACGGGAGAGAGAGA
GATCAAGTGACCATGTTAGGCCCCCTAGCCATAGTCCCCATCCTCATCAGAGGGAAAGAGCAAACGATGACCGAGTCCACAACCGAAGTCGCAGTCCTTACGGGAGAGAA
AGGGGGAGCCCTACTGATGGACGTGGCTCCAGCTATAGTCCTCCTCGTGATAGAGAGAGGTCAAACCCGGACAATGGTCACGAGCAGCGGCTAAATACAGCCGCAGAACC
TGGGGATAGCCCCAATTATGGTGGGACTCAGAGCCCAAAGCATCGGGGATATAACAGCCCCCAAGCAGAGGAATGATGATCCACAAAATGAAGTGATGTTGCTCTCAATT
TGCTCCAGACCATATCTAGATGTATAATCAGCATCTGCACTGCCGCTAAACATGTACTGTAAGGATAATGTTCTGTGATTTCTGTATGGTTCTATCTATTCTAAGGATAT
GGTGTTAGTTACTAGGGGTTTAAGTTAGCTATCAGAATACTTGGCACCTCTGATTATCCGTATTTGACAGACAGTCTTTATTAACGTTGCTTCTTTTTGCAGTTCTTAAC
AGTTAAAATGAAACATGTTTGTTGTGGAACTTGTTTTTTGTTTGTTGGGTATAAACATGTTAGATGATTGATTCGTAACAATTTCATTATGTGATTCTCAGATTTAGTTG
GAT
Protein sequenceShow/hide protein sequence
MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGVGGGGGSRRSSTNTRPSKTLFII
NFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGITR
SPYRRQRASPDYGSRRSPSPYQRNRGSPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPHPHQRERANDDRVHNRSRSPYGRERGSPTDGRGSSYSPPRDRERSNPDNGH
EQRLNTAAEPGDSPNYGGTQSPKHRGYNSPQAEE