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MC06g1974 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1974
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC06:27245812..27246026
RNA-Seq ExpressionMC06g1974
SyntenyMC06g1974
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044449.1 hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa]1.98e-0745.07Show/hide
Query:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS
        R  FW+EL +L  +C   WILG  +    W  E S  NP   SMKRFN FI    L+D PL   N +FT S
Subjt:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS

TYJ99326.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.98e-0745.07Show/hide
Query:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS
        R  FW+EL +L  +C   WILG  +    W  E S  NP   SMKRFN FI    L+D PL   N +FT S
Subjt:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS

TYK29577.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.97e-0745.07Show/hide
Query:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS
        R  FW+EL +L  +C   WILG  +    W  E S  NP   SMKRFN FI    L+D PL   N +FT S
Subjt:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS

XP_022145142.1 uncharacterized protein LOC111014657 [Momordica charantia]6.91e-0848.28Show/hide
Query:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQS-MKRFNIFIEQVALMD
        R  FWQEL DL+ LCG  W+LG  +    WS E S+ NP Q+ M +FN FI+   L+D
Subjt:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQS-MKRFNIFIEQVALMD

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]1.26e-0952.17Show/hide
Query:  FWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNP-TQSMKRFNIFIEQVALMDFPLALLNNRFTLSK
        FWQEL DLS LC  +WIL   +    WS EKSNG P T+SM  FN FIE  +L+D PL   N + T S+
Subjt:  FWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNP-TQSMKRFNIFIEQVALMDFPLALLNNRFTLSK

TrEMBL top hitse value%identityAlignment
A0A5A7TTA1 DUF4283 domain-containing protein9.60e-0845.07Show/hide
Query:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS
        R  FW+EL +L  +C   WILG  +    W  E S  NP   SMKRFN FI    L+D PL   N +FT S
Subjt:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS

A0A5D3BJP3 LINE-1 retrotransposable element ORF2 protein9.57e-0845.07Show/hide
Query:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS
        R  FW+EL +L  +C   WILG  +    W  E S  NP   SMKRFN FI    L+D PL   N +FT S
Subjt:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS

A0A5D3E0F6 LINE-1 retrotransposable element ORF2 protein9.54e-0845.07Show/hide
Query:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS
        R  FW+EL +L  +C   WILG  +    W  E S  NP   SMKRFN FI    L+D PL   N +FT S
Subjt:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQ-SMKRFNIFIEQVALMDFPLALLNNRFTLS

A0A6J1CVN2 uncharacterized protein LOC1110146573.35e-0848.28Show/hide
Query:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQS-MKRFNIFIEQVALMD
        R  FWQEL DL+ LCG  W+LG  +    WS E S+ NP Q+ M +FN FI+   L+D
Subjt:  RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQS-MKRFNIFIEQVALMD

A0A6J1E2G6 uncharacterized protein LOC1110254056.12e-1052.17Show/hide
Query:  FWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNP-TQSMKRFNIFIEQVALMDFPLALLNNRFTLSK
        FWQEL DLS LC  +WIL   +    WS EKSNG P T+SM  FN FIE  +L+D PL   N + T S+
Subjt:  FWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNP-TQSMKRFNIFIEQVALMDFPLALLNNRFTLSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATCCCAATTTTGGCAAGAGCTATCTGATCTTTCTTATTTGTGTGGTGAAAACTGGATTCTTGGCAGATATTATAAATTTTGCATATGGTCTTCTGAAAAGTCTAATGG
AAACCCCACTCAAAGTATGAAACGTTTCAATATATTCATTGAACAAGTGGCATTGATGGACTTCCCTCTGGCTCTCCTTAACAATAGATTCACATTGTCCAAA
mRNA sequenceShow/hide mRNA sequence
AGATCCCAATTTTGGCAAGAGCTATCTGATCTTTCTTATTTGTGTGGTGAAAACTGGATTCTTGGCAGATATTATAAATTTTGCATATGGTCTTCTGAAAAGTCTAATGG
AAACCCCACTCAAAGTATGAAACGTTTCAATATATTCATTGAACAAGTGGCATTGATGGACTTCCCTCTGGCTCTCCTTAACAATAGATTCACATTGTCCAAA
Protein sequenceShow/hide protein sequence
RSQFWQELSDLSYLCGENWILGRYYKFCIWSSEKSNGNPTQSMKRFNIFIEQVALMDFPLALLNNRFTLSK