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MC06g1983 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g1983
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCDGSH iron-sulfur domain-containing protein NEET
Genome locationMC06:27343378..27344721
RNA-Seq ExpressionMC06g1983
SyntenyMC06g1983
Gene Ontology termsGO:0010150 - leaf senescence (biological process)
GO:0010506 - regulation of autophagy (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:0072593 - reactive oxygen species metabolic process (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR018967 - Iron-binding zinc finger, CDGSH type
IPR042216 - MitoNEET, CDGSH iron-sulfur domain
IPR045131 - CDGSH iron-sulfur domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035586.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita argyrosperma subsp. argyrosperma]4.83e-4085.9Show/hide
Query:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        RR + VVRAE G + INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Subjt:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

XP_022159571.1 CDGSH iron-sulfur domain-containing protein NEET [Momordica charantia]7.23e-71100Show/hide
Query:  MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKA
        MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKA
Subjt:  MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKA

Query:  TGDNVGPLLLKKQ
        TGDNVGPLLLKKQ
Subjt:  TGDNVGPLLLKKQ

XP_022996357.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]1.40e-4188.46Show/hide
Query:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        RRR+ VVRAE G E INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Subjt:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

XP_023534172.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]1.40e-4188.46Show/hide
Query:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        RRR+ VVRAE G E INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Subjt:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

XP_038876467.1 CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida]2.54e-4081.48Show/hide
Query:  GGGRRRLAVVRAE-AGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK
        G GRR   VVRA+ +G EPINPAIRK+EDKVVDSVL+++L+KPLT YCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLK+
Subjt:  GGGRRRLAVVRAE-AGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK

TrEMBL top hitse value%identityAlignment
A0A0A0KL88 ZnF_CDGSH domain-containing protein7.55e-4083.75Show/hide
Query:  GRRRLAVVRAEAGA--EPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK
        GRRR  VVRAE G+  E INPAIRKSEDKVVDSVL+ +L+KPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Subjt:  GRRRLAVVRAEAGA--EPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK

A0A5A7UKN7 CDGSH iron-sulfur domain-containing protein NEET2.16e-3969.61Show/hide
Query:  VASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGA-EPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL
        ++S SS+ +    L   RS    GRRR  VVRAE  + E INPAIRKSE+KVVDSVL+++L+KPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  VASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGA-EPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL

Query:  KK
        KK
Subjt:  KK

A0A6J1E4B9 CDGSH iron-sulfur domain-containing protein NEET3.50e-71100Show/hide
Query:  MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKA
        MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKA
Subjt:  MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKA

Query:  TGDNVGPLLLKKQ
        TGDNVGPLLLKKQ
Subjt:  TGDNVGPLLLKKQ

A0A6J1H2X5 CDGSH iron-sulfur domain-containing protein NEET2.34e-4085.9Show/hide
Query:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        RR + VVRAE G + INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Subjt:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

A0A6J1K1P5 CDGSH iron-sulfur domain-containing protein NEET6.80e-4288.46Show/hide
Query:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        RRR+ VVRAE G E INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Subjt:  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

SwissProt top hitse value%identityAlignment
Q05B71 CDGSH iron-sulfur domain-containing protein 22.2e-1761.9Show/hide
Query:  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + DL     AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6AZG1 CDGSH iron-sulfur domain-containing protein 2B2.2e-1761.9Show/hide
Query:  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + DL     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6PCF8 CDGSH iron-sulfur domain-containing protein 2A2.2e-1761.9Show/hide
Query:  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + DL     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q7T326 CDGSH iron-sulfur domain-containing protein 21.3e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + DL  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q9FLI7 CDGSH iron-sulfur domain-containing protein NEET6.3e-2872.84Show/hide
Query:  GGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        G  ++R+ VVRAE G   INP IRK+EDKVVDSV++++L+K +T YCRCWRS TFPLCDGSHVKHNKA GDNVGPLLLKKQ
Subjt:  GGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Arabidopsis top hitse value%identityAlignment
AT5G51720.1 2 iron, 2 sulfur cluster binding4.4e-2972.84Show/hide
Query:  GGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        G  ++R+ VVRAE G   INP IRK+EDKVVDSV++++L+K +T YCRCWRS TFPLCDGSHVKHNKA GDNVGPLLLKKQ
Subjt:  GGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGATTATTGTGACCATTGCTGGTTCTGTGGCATCAATATCATCAACACACGCTGCTCACCGGAACTTGTACTCGAGCCGGAGCAGCCGCGGCGGAGGGCGGAG
GCGACTGGCCGTCGTCCGAGCAGAAGCCGGCGCTGAACCCATAAACCCGGCCATCAGGAAGAGCGAGGACAAAGTCGTCGACTCTGTTCTTCTTTCTGACCTTGCCAAGC
CCCTCACTGCCTATTGCAGATGTTGGAGGTCAGCCACTTTTCCTCTGTGTGATGGAAGTCATGTTAAGCACAACAAGGCAACTGGAGATAATGTTGGTCCTTTGCTCTTA
AAGAAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
CGGGGAGCCAAGTATTATCGAAATTAAAATTGAAACTTGAGGTTGAAATTTGATAGGAGTCGAAAATGATAAGAGTTAAAAATGGATATGTTCTCCAAAAAGTAATAAAA
AAAAAGGTAATATTAATTAGGGCAGGGGATCCACCAATTTGGATTAGGCCGCTTTAAAACCGTGCCCTCCACACGTTCCTCACCCACTCGCACACACAAACACACGCACA
GAGAGAGATCTGAAGCACAGGTATGGCGTCGATTATTGTGACCATTGCTGGTTCTGTGGCATCAATATCATCAACACACGCTGCTCACCGGAACTTGTACTCGAGCCGGA
GCAGCCGCGGCGGAGGGCGGAGGCGACTGGCCGTCGTCCGAGCAGAAGCCGGCGCTGAACCCATAAACCCGGCCATCAGGAAGAGCGAGGACAAAGTCGTCGACTCTGTT
CTTCTTTCTGACCTTGCCAAGCCCCTCACTGCCTATTGCAGATGTTGGAGGTCAGCCACTTTTCCTCTGTGTGATGGAAGTCATGTTAAGCACAACAAGGCAACTGGAGA
TAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAGAAATTATTCTTTTTTTTTTTCTAGCTCTTATCAATTATCATTGCATCAGCTTCAACTCTACATTCTCCTAATGTCT
TGATCTATCATTTTTTTTCTTCTCTCAATAGTTTATTTATCTTGTGTTTTGTTCGATATAGTGAATCGGTTTATTGTTTTAAGGTCTTTTTTTCTTATAATAATTTTTAA
TTCTCTCCCTTGATTTGAGAAAAATTGAAATGTGTGGTGAACTTGTTTTATCCAAATTGTAGTAACCATAAAAAGGTAAATAACAAGGTTTGTACAGTTTTGAAACGTGT
GGCGAACTAAATTGATGCTAAGTTTTAGGTAGCTTTCGAGGTGTGAGAATATAGATTAGACATAAACACATAAAACAATAGCCTAAACATAAGATGTCTTACCCGAAAAA
TAAAGAGTTGGTTAGCGTTCTTTAGGTACTAACTTCTCATAGACATATGTGTGGTAGTTAGCCTAAGCTCGCAGCCAACATTGGTCTGTGATAAGAGGAGAACTTTGGTT
GTAGTGAATTTAATTACGTAACAAATTCTTTAATTCATTT
Protein sequenceShow/hide protein sequence
MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL
KKQ