; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g2019 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g2019
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationMC06:27688248..27692291
RNA-Seq ExpressionMC06g2019
SyntenyMC06g2019
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437161.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo]1.59e-19091.23Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSS+PC QPQIKVSQP LSF TK+YSGLK QSA PFGG KPN+T EFYGKVHKSL +RTHNKKAARAQFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIETS+K YMYINGPGGDLTP+MA+YDTMQSL SPVATHCVGYAYN+AAFLLAAGEKGNRFAMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAG+ARGQADDIQNEANELLRIRDYLF+ELSKKTGQPVEKI+KDLSR+K FNAQEALDYGLIDRI RPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_022158384.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia]2.72e-207100Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_022957748.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucurbita moschata]2.13e-17988.07Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MA SS+PC QPQI  SQ PLS ATK+YSGLKLQSA PFGGAKPNLT EFYGKVHKSL S T+NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIE+SK LYMYINGPGGDLTPS+AIYDTMQSLKS V THCVGYAY+LAAFLLAAGEKG+R AMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        P GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_022995667.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like [Cucurbita maxima]2.13e-17987.72Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MA SS+PC QPQI  SQ P+S ATK+YSGLKLQSA PFGGAKPNLTVEFYGKVHKSL S T+NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIE+SK LYMY+NGPGGDLTPS+AIYDTMQSLKS V THCVGYAY+LAAFLLAAGEKG+R AMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        P GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_038906920.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida]1.27e-19695.44Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSS+PCLQPQIKVSQPPLSF TK+YSGLK QSA PFGGAKPNLT EFYGKVHKSL +R  NKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAGAARGQADDIQNEANELLRIRDYL+DELSKKTGQPVEKIN+DLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

TrEMBL top hitse value%identityAlignment
A0A0A0KKQ7 ATP-dependent Clp protease proteolytic subunit1.71e-17885.61Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAV+S PCLQPQIKVSQP LS ATK+Y+GLK QSA PFGGAKPN+T EFYGKVHKSL +RT+NKKAARAQFQMMPIGTPRVPY+TPGEG WQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIG  +DEEFSNQILATMLYLDS+E SKKLY+YINGPGGDLTP++A+YDTMQSLKSP+ATHC+G AYN+AAFLLAAGEKGNR AMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAG+ARG+ADDIQNEAN+LL+IRDYLFDELSKKTGQPVEKI+KDLS  KRFNAQ+AL+YGLIDRI RP RIKADAPRKD GTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A1S3ATH1 ATP-dependent Clp protease proteolytic subunit7.72e-19191.23Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSS+PC QPQIKVSQP LSF TK+YSGLK QSA PFGG KPN+T EFYGKVHKSL +RTHNKKAARAQFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIETS+K YMYINGPGGDLTP+MA+YDTMQSL SPVATHCVGYAYN+AAFLLAAGEKGNRFAMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAG+ARGQADDIQNEANELLRIRDYLF+ELSKKTGQPVEKI+KDLSR+K FNAQEALDYGLIDRI RPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A6J1DZ88 ATP-dependent Clp protease proteolytic subunit1.31e-207100Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A6J1H153 ATP-dependent Clp protease proteolytic subunit1.03e-17988.07Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MA SS+PC QPQI  SQ PLS ATK+YSGLKLQSA PFGGAKPNLT EFYGKVHKSL S T+NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIE+SK LYMYINGPGGDLTPS+AIYDTMQSLKS V THCVGYAY+LAAFLLAAGEKG+R AMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        P GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A6J1JZK9 ATP-dependent Clp protease proteolytic subunit1.03e-17987.72Show/hide
Query:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MA SS+PC QPQI  SQ P+S ATK+YSGLKLQSA PFGGAKPNLTVEFYGKVHKSL S T+NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
        YRERVIFIGQNIDEEFSNQILATMLYLDSIE+SK LYMY+NGPGGDLTPS+AIYDTMQSLKS V THCVGYAY+LAAFLLAAGEKG+R AMPLSRIALQS
Subjt:  YRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        P GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

SwissProt top hitse value%identityAlignment
Q20F17 ATP-dependent Clp protease proteolytic subunit6.4e-5349.48Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VP+R PGE + QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ E SK LY+YIN PGG +T  +A+YDTM  +K+ V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI
        ++A+F+LA G +G R A+P SRI +  P G +RGQA ++ +E+ E++RIR  +    +++TGQP+ +I++DL R +  +A+EA DYG++D++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI

Q3MDK7 ATP-dependent Clp protease proteolytic subunit 21.4e-5553.89Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VPYR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS +  K +Y+YIN PGG +T  +AIYDTMQ +KS V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ +FLLAAG KG R A+P SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    +AQEA +YGLIDR++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 25.0e-5855.44Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VPYR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS +  K + +YIN PGG +T  MAIYDTMQ +KS V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ +FLLAAG KG R A+P SRI +  P+G  RGQA DI+ EA E+LR+R  L +  +  TGQP+EKI +D+ R    +A+EA +YGLIDR++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q8YP43 Probable ATP-dependent Clp protease proteolytic subunit 34.7e-5653.89Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VPYR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS +  K +Y+YIN PGG +T  +AIYDTMQ +KS V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ +FLLAAG KG R A+P SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    +AQEA++YGLIDR++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic8.4e-11473.17Show/hide
Query:  MAVSSSPCLQPQIKVSQPPL--SFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWN
        MAVS +  L       QP L  S + KLYSGLK QSA        NL  EFYG+V+KSL S T   KA+R++ +MMPIGTPRVPYR   EGTWQWVD+WN
Subjt:  MAVSSSPCLQPQIKVSQPPL--SFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWN

Query:  ALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIAL
        ALYRERVIFIGQNIDEEFSNQILATMLYLD+++ S+++YMY+NGPGGDLTPS+AIYDTM+SLKSPV THCVG AYNLA FLLAAGEKG+RFAMPLSRIAL
Subjt:  ALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIAL

Query:  QSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        QSPAGAARGQADDIQNEA EL RIRDYLF+EL+K TGQP E++ KDLSR+KRFNA+EA++YGLID+IVRPPRIK DAPR+D   GLG
Subjt:  QSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 52.3e-3740.69Show/hide
Query:  TPRVPYRTPGEGTWQWV-----DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYA
        +P  P    G+G    V      + + L++ R+I  G  +D++ +N I+A +LYLD+++ +K + MY+N PGG +T  MAI+DTM+ ++  V+T CVG A
Subjt:  TPRVPYRTPGEGTWQWV-----DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYA

Query:  YNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIK
         ++ AFLL+AG KG R+++P SRI +  P G A+G   DI  +ANE+L  +  L   L+  TGQ +EKIN+D  R    +A+EA +YGLID ++  P +K
Subjt:  YNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIK

Query:  ADAP
        A  P
Subjt:  ADAP

AT1G12410.1 CLP protease proteolytic subunit 26.0e-11573.17Show/hide
Query:  MAVSSSPCLQPQIKVSQPPL--SFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWN
        MAVS +  L       QP L  S + KLYSGLK QSA        NL  EFYG+V+KSL S T   KA+R++ +MMPIGTPRVPYR   EGTWQWVD+WN
Subjt:  MAVSSSPCLQPQIKVSQPPL--SFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWN

Query:  ALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIAL
        ALYRERVIFIGQNIDEEFSNQILATMLYLD+++ S+++YMY+NGPGGDLTPS+AIYDTM+SLKSPV THCVG AYNLA FLLAAGEKG+RFAMPLSRIAL
Subjt:  ALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIAL

Query:  QSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        QSPAGAARGQADDIQNEA EL RIRDYLF+EL+K TGQP E++ KDLSR+KRFNA+EA++YGLID+IVRPPRIK DAPR+D   GLG
Subjt:  QSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

AT5G23140.1 nuclear-encoded CLP protease P75.2e-3438.25Show/hide
Query:  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLS
        D+++ L +ER+I I   I+++ S+ ++A +LYL+S   SK ++MY+N PGG +T  +AIYDTMQ ++SP++T C+G A ++A+ LLAAG KG R ++P +
Subjt:  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLS

Query:  RIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV--RPPRIKADA
         + +  P+G   GQA DI     +++R+ D L +   K TGQP++ +  ++ R      +EA  +G+ID ++  RP  +  DA
Subjt:  RIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV--RPPRIKADA

AT5G45390.1 CLP protease P41.4e-3137.21Show/hide
Query:  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLS
        D+   L RER++F+G +ID+  ++ I++ +L LD+ +  K + ++IN PGG L+ +MAIYD +Q +++ V+T  +G A + A+ +L AG KG RFAMP +
Subjt:  DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLS

Query:  RIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        RI +  P G A GQA D++ +A E++  ++ +   ++  T +  E++ KD+ R +  +  EA++YGLID ++
Subjt:  RIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

ATCG00670.1 plastid-encoded CLP P5.2e-4241.97Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VP+R+PGEG   WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL   + +K LY++IN PGG +   MAIYDTMQ ++  V T C+G A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGA-ARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI
        ++A+F+L  G    R A P +R+ +  PA +    Q  +   EA ELL++R+ +     ++TG+P+  I++D+ R    +A EA  +G++D +
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGA-ARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCTTCTTCTCCGTGTCTTCAACCTCAAATTAAAGTTTCTCAGCCTCCTCTCAGCTTTGCAACGAAGCTTTACTCCGGACTAAAGCTTCAATCTGCTTGTCC
GTTTGGAGGAGCAAAACCTAATCTTACTGTAGAATTCTATGGAAAAGTTCATAAAAGTCTACACTCCAGGACACATAACAAGAAGGCAGCTCGTGCACAATTTCAGATGA
TGCCTATAGGGACACCAAGGGTGCCTTACAGAACTCCTGGTGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTATATCGAGAACGGGTTATCTTCATTGGGCAA
AACATCGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATGCTATATCTTGACAGCATTGAGACGTCCAAGAAACTCTATATGTACATAAATGGCCCTGGTGGAGATCT
AACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGAAGAGCCCTGTAGCAACCCATTGTGTGGGCTATGCCTATAATCTTGCAGCCTTTCTACTTGCAGCTGGAG
AAAAGGGTAACCGCTTTGCGATGCCTCTATCACGAATTGCTTTGCAATCCCCAGCTGGAGCTGCTCGTGGTCAGGCTGACGATATTCAAAATGAAGCAAACGAGCTCTTG
AGAATCAGGGATTATCTTTTTGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATTAACAAGGACTTGAGTCGAATGAAGCGCTTTAATGCTCAGGAAGCCCT
TGATTATGGGCTTATTGACCGTATAGTTAGGCCACCACGGATTAAGGCCGATGCACCCCGTAAGGATGCTGGAACAGGGCTTGGTTAG
mRNA sequenceShow/hide mRNA sequence
CAAAGCGAAATATTTTTGATATTTGGGAGGGTTTAGGCCAGCTCGCTCCTCGACTAATCTAAAATAAAAAAAGGAGAGATATTTTAAATCAAAATTGTTCTTTTAACTTC
ACCATACAAAGGAAATTTTTGCGACTACGACGGATTGTTGAGCTAGGGTAAATTAAAAAGAGGGACACGTGTGAAATGACCGTAGCTAATTTTTGATATGCAAGGCGTTG
GGATATGGGCCTGATTGGAGCCCACAAACATCAATCGGGCTCCAGCCCAAAAGGCCCAATCGGAAAGCTGTCTCCACCTGCGAGGCGAGGCGCTGTGTCATCTTCTTCGG
AATCAGACCCAAGAGGGCCTCGCTCTCTCGTGTTGGGTGTTCGTGTTCTGTTATCGGCTGATAATGGCAGTCTCTTCTTCTCCGTGTCTTCAACCTCAAATTAAAGTTTC
TCAGCCTCCTCTCAGCTTTGCAACGAAGCTTTACTCCGGACTAAAGCTTCAATCTGCTTGTCCGTTTGGAGGAGCAAAACCTAATCTTACTGTAGAATTCTATGGAAAAG
TTCATAAAAGTCTACACTCCAGGACACATAACAAGAAGGCAGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAGGGTGCCTTACAGAACTCCTGGTGAGGGA
ACTTGGCAATGGGTTGATTTGTGGAATGCCCTATATCGAGAACGGGTTATCTTCATTGGGCAAAACATCGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATGCTATA
TCTTGACAGCATTGAGACGTCCAAGAAACTCTATATGTACATAAATGGCCCTGGTGGAGATCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGAAGAGCC
CTGTAGCAACCCATTGTGTGGGCTATGCCTATAATCTTGCAGCCTTTCTACTTGCAGCTGGAGAAAAGGGTAACCGCTTTGCGATGCCTCTATCACGAATTGCTTTGCAA
TCCCCAGCTGGAGCTGCTCGTGGTCAGGCTGACGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTTTGATGAGCTTTCTAAGAAAACAGGCCA
GCCTGTTGAAAAGATTAACAAGGACTTGAGTCGAATGAAGCGCTTTAATGCTCAGGAAGCCCTTGATTATGGGCTTATTGACCGTATAGTTAGGCCACCACGGATTAAGG
CCGATGCACCCCGTAAGGATGCTGGAACAGGGCTTGGTTAGAGTGAAGATCAATTGTTCACTTCACATTGAAAGTATCTTTAACCACATTAAAATGGCTGGATTGAATTT
AGAATGTATGTGGGCATGGAGTGATTGTTGTATTTGAAGTTCTTGACTATGAGAGAATATGAAGGGTTTTTCAAGGCCTACGGTAGAGGATTCTGGAGAGAAATACGAGG
ACGGGAAATTCAATGGAATTTTTTTTTTAAAGAAATTTCACTGCATAAATTTATATAATATTATTTTATATTGAGATAGTTTGGATGATGCTATTTATCATAAAATTTCA
GACGTTCTACTTTTAGAAGTATATATTTGTATTATGTCATTTGGAAATGGCTTTTTTTTTTCCCTTATTTTTCCCCCTTCTATGCATTTATATAGCTTTCTAATAACAAT
TATTTGTTTATTATTCATAGTATGTATTGCCAATTGC
Protein sequenceShow/hide protein sequence
MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSRTHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQ
NIDEEFSNQILATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELL
RIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG