; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g2034 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g2034
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationMC06:27861272..27868094
RNA-Seq ExpressionMC06g2034
SyntenyMC06g2034
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028290.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita argyrosperma subsp. argyrosperma]1.70e-24988.21Show/hide
Query:  MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
        MS K K   ++  S  EQ VGKEGIEWIMNLPDVPMKLPPH+EL RTR ECKADAPIHTDTIQYSGAYAS+G+DNSL+LD FR NFKIEVIDL EDD+EF
Subjt:  MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF

Query:  DMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
        DMIGIDP+LANAFRR LIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PI VDPRLFEYSD+DTPNEKNTIVFRLH RCERGKPRLT TSKALTWLPN
Subjt:  DMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN

Query:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
        GSEFPLVSDKSV N+KPKTYTSFSCSQD LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAEE
Subjt:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE

Query:  LKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        LK+KCPV+VFDIEDIANGKKRATV RPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  LKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

XP_022158557.1 DNA-directed RNA polymerases I and III subunit RPAC1-like isoform X1 [Momordica charantia]4.65e-25693.37Show/hide
Query:  SKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAF
        S+ EQ  GKEGIEWIMNLPDVPMKLPPHLE+ RTR ECKADAPIHTDTIQYSGAYASMGVDNSL+LDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAF
Subjt:  SKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAF

Query:  RRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVP
        RR LIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNTIVFRLHARCERGKPRLTVTSK LTWLPNGSEFPLVSDKSVP
Subjt:  RRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVP

Query:  NSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIE
        NSKPKTYTSFSCSQD LPEFS N IGPKD+DIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELK KCPVDVFDIE
Subjt:  NSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIE

Query:  DIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        DIANGKKRA V RPRSCTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  DIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

XP_022158862.1 LOW QUALITY PROTEIN: DNA-directed RNA polymerases I and III subunit RPAC1-like [Momordica charantia]1.76e-28399.74Show/hide
Query:  MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
        MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
Subjt:  MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF

Query:  DMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
        DMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
Subjt:  DMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN

Query:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
        GSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
Subjt:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE

Query:  LKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        LKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
Subjt:  LKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]1.02e-24888.24Show/hide
Query:  MSAKDKRSRDILGSKFE-QCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS KDK   ++  S  E + VGKEGIEWIMNLPDVPMKLPPH+EL RTR ECKADAPIHTDTIQYSGAYAS+G+DNSL+LD FR NFKIEVIDL EDD+E
Subjt:  MSAKDKRSRDILGSKFE-QCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRR LIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PI VDPRLFEYSD+DTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQD LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        ELK+KCPV+VFDIEDIANGKKRATV RPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]8.41e-25090.03Show/hide
Query:  MSAKDKRSRDILGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS KDK   ++  S+ EQ  V KEGIEWIMNLPDVPMKLPPHLEL RTR ECKADAPIHTDTIQYSGA+ASMGVDNSL+LDYFRNNFKIEVIDL EDDIE
Subjt:  MSAKDKRSRDILGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLVPIHVDPRLFEYSD+DTPNEKNTIVFRLHA CERGK RLTVTSKALTWLP
Subjt:  FDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQD LPEFS NPIGPKDSDII+ARL PGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI+DELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        ELK KCPV+VFDIEDIA GKKRATV RPR+CTLCRECIRG+ WEKRV+LRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A1S4DX61 DNA-directed RNA polymerases I and III subunit RPAC11.18e-24085.97Show/hide
Query:  MSAKDKRSRDIL--GSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDI
        MS KDK    ++      ++ VGKEGIEWIMNLPDVPMKLPPH+EL RTR ECK DAPIHTDTIQYSGA+ASMG DNSL+LD FRNNFKIEVI+L  DDI
Subjt:  MSAKDKRSRDIL--GSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDI

Query:  EFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWL
        EFDMIGIDPALANAFRR LIAEVPTMAIEKVL ANNTSI+QDEVLAHRLGL+PI VDPRLF+YSD+D PNE NTIVFRLHARCERGKPRLTV S+ALTWL
Subjt:  EFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWL

Query:  PNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        PNGSEFPLVSDKS+PNSKP+TYTSFSCSQD LPEFSKN IGPKDSDII+ARL PGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Subjt:  PNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        EELK KCPV+VFDIEDIA GKKRATV RPR+CTLCRECIRG+AWEKRV+LRRVK+HFIFKIESTGALPP VLFTEA+KILEDKCERLIAELS
Subjt:  EELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC12.25e-25693.37Show/hide
Query:  SKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAF
        S+ EQ  GKEGIEWIMNLPDVPMKLPPHLE+ RTR ECKADAPIHTDTIQYSGAYASMGVDNSL+LDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAF
Subjt:  SKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAF

Query:  RRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVP
        RR LIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNTIVFRLHARCERGKPRLTVTSK LTWLPNGSEFPLVSDKSVP
Subjt:  RRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVP

Query:  NSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIE
        NSKPKTYTSFSCSQD LPEFS N IGPKD+DIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELK KCPVDVFDIE
Subjt:  NSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIE

Query:  DIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        DIANGKKRA V RPRSCTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  DIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC18.50e-28499.74Show/hide
Query:  MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
        MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF
Subjt:  MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEF

Query:  DMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
        DMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN
Subjt:  DMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPN

Query:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
        GSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE
Subjt:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEE

Query:  LKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        LKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
Subjt:  LKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC14.93e-24988.24Show/hide
Query:  MSAKDKRSRDILGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS KDK   ++  S  EQ  VGKEGIEWIMNLPDVPMKLPPH+EL RTR ECKADAPIHTDTIQYSGAYAS+G+DNSL+LD FR NFKIEVIDL EDD+E
Subjt:  MSAKDKRSRDILGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRR LIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PI VDPRLFEYSD+DTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQD LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        ELK+KCPV+VFDIEDIANGKKRATV RPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC11.41e-24888.24Show/hide
Query:  MSAKDKRSRDILGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE
        MS +DK    +  S  EQ  VGKEGIEWIMNLPDVPMKLPPH+EL RTR ECKADAPIHTDTIQYSGAYAS+G+DNSL+LD FR NFKIEVIDL EDD+E
Subjt:  MSAKDKRSRDILGSKFEQ-CVGKEGIEWIMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRR LIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PI VDPRLFEYSD+DTPNEKNTIVFRLH RCERGKPRLT TS+ALTWLP
Subjt:  FDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQD LPEF+ NPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        ELK+KCPV+VFDIEDIANGKKRATV RPR+CTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  ELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC11.1e-7646.22Show/hide
Query:  TIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFE
        T  + G Y+  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRR L+AEVPTMA+EKVLV NNTSI+QDE+LAHRLGL+PIH DPRLFE
Subjt:  TIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFE

Query:  YSD--EDTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDI
        Y +  ++   E +T+ FRL  RC R                   V ++ +TW+P G++  L                          F +  I P   DI
Subjt:  YSD--EDTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDI

Query:  IIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKR
        +IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V +++++  GKK A V  PR  T  RE  R E  +K 
Subjt:  IIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKR

Query:  VSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL
        V L RV++H+IF +ESTG LPP+VL +EAIK+L  KC R + EL
Subjt:  VSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC12.4e-6339.54Show/hide
Query:  ADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPI
        +D      ++ + G Y     DN   LD F+ N K+ +  L ++ + F++ GID ++ANAFRR LIAE+PT+A E V + NNTSIIQDEVL+HR+GLVPI
Subjt:  ADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPI

Query:  HVDPRLFEY------SDEDTPNEKNTIVFRLHARCERGK---------PRLTVTSKA----LTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEF
          DP +F++        E T  + +T+VF L+ +CE  K          RL V S+     L W P G +                             F
Subjt:  HVDPRLFEY------SDEDTPNEKNTIVFRLHARCERGK---------PRLTVTSKA----LTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEF

Query:  SKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLC
        + NPI   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + +   P  V ++E+  +GKK+A V   R  T+ 
Subjt:  SKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLC

Query:  RECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKC
        REC+R   +  +V L RV++H++F +ESTG + P+VLF ++I +L+ KC
Subjt:  RECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC11.2e-7548.24Show/hide
Query:  TIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFE
        T  + G YA  G D++   + F  NF+++V+ + ED +EFDM+GID A+ANAFRR L+AEVPTMA+EKVLV NNTSI+QDE+LAHRLGL+PI  DPRLFE
Subjt:  TIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFE

Query:  YSD--EDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIAR
        Y +  E+   E +T+ FRL  RC R               PN ++     D S PN         ++  T+       D  PE     I P   DI+IA+
Subjt:  YSD--EDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIAR

Query:  LCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLR
        L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL       V ++E++  GKK A V   R  T  RE  R E  +K V L 
Subjt:  LCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKRVSLR

Query:  RVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL
        RV++H+IF +ESTG LPP+VL +EAIKIL  KC R + EL
Subjt:  RVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC13.9e-7746.8Show/hide
Query:  TIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFE
        T  + G Y+  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRR L+AEVPTMA+EKVLV NNTSI+QDE+LAHRLGL+PIH DPRLFE
Subjt:  TIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFE

Query:  YSD--EDTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDI
        Y +  ++   E +T+ FRL  RC R                   V ++ +TW+P G++  L                          F +  I P   DI
Subjt:  YSD--EDTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDI

Query:  IIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKR
        +IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V ++++I  GKK A V  PR  T  RE  R E  +K 
Subjt:  IIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECIRGEAWEKR

Query:  VSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL
        V L RV++HFIF +ESTG LPP+VL +EAIK+L  KC+R + EL
Subjt:  VSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac17.8e-7042.05Show/hide
Query:  PHLELHRTRECKADAPI-HTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQ
        P+LE  RT+    ++ + +     YSGAY S+G DNS  L+ F+ NFKI ++    +++ F+MIGID  +ANA RR +I+E+PTMAIEKV + NNTSI+Q
Subjt:  PHLELHRTRECKADAPI-HTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQ

Query:  DEVLAHRLGLVPIHVDPRLFEYSDEDTPNE----KNTIVFRLHARCER----GK-PRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDAL
        DEVLAHRLG++PI VDPR F +     PN+    ++T++F+L  +CE+    GK    T  SK L W+P   +     ++  PN + +            
Subjt:  DEVLAHRLGLVPIHVDPRLFEYSDEDTPNE----KNTIVFRLHARCER----GK-PRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDAL

Query:  PEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSC
                 P + DI I +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L  KCP  VFDIED      +    RP  C
Subjt:  PEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSC

Query:  TLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKC
        T+CRECIR   +E+ V + RV++HFIF IESTGAL    +F EAIKI  +KC
Subjt:  TLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 437.4e-14067.95Show/hide
Query:  IMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIE
        I +LPDVP  LPPHLEL RTR  CK D+ IH   I +SGAY+SMGVDNS++L+ F  +FK++VI L E D+ FDMIG+   +ANAFRR L+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIE

Query:  KVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEY-SDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        KV VANNTS+IQDEVLAHRLGL+PI  DPRLFEY S+ D PNEKNTIVF+LH +C +G PR  V +  L WLPNGSE  L+ +     + PKTYTSF+ S
Subjt:  KVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEY-SDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTR
        QD+ PEF++NPI P   DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL   CP  VFDIED+  G+KRATV R
Subjt:  QDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTR

Query:  PRSCTLCRECIR-GEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS
        PR C+LCRECIR G  WE +V LRRVKNHFIF IESTG+ PPEVLF EA+KILEDKCER+I+ELS
Subjt:  PRSCTLCRECIR-GEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein1.1e-13065.28Show/hide
Query:  IMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAI
        I +LPDVP  LPPHL+  +TR   K +AP HT +  YSG Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRR LIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEY-SDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GL+PI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEY-SDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVT
        SQD+LPEF+ NPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L + CP +VFDIED+  GKKRATV 
Subjt:  SQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVT

Query:  RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERL
        +PR CTLC+EC+R +     V L  VKNHFIF IESTG+LPPEVLFTEA+KILE KCE +
Subjt:  RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein1.1e-13065.28Show/hide
Query:  IMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAI
        I +LPDVP  LPPHL+  +TR   K +AP HT +  YSG Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRR LIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEY-SDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GL+PI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEY-SDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVT
        SQD+LPEF+ NPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L + CP +VFDIED+  GKKRATV 
Subjt:  SQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVT

Query:  RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERL
        +PR CTLC+EC+R +     V L  VKNHFIF IESTG+LPPEVLFTEA+KILE KCE +
Subjt:  RPRSCTLCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein2.2e-9164.89Show/hide
Query:  IMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAI
        I +LPDVP  LPPHL+  +TR   K +AP HT +  YSG Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRR LIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELHRTR-ECKADAPIHTDTIQYSGAY-ASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEY-SDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GL+PI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEY-SDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQD+LPEF+ NPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein5.1e-3232.15Show/hide
Query:  KIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVD-------PRLFEYSDEDTPNEKNTIVFRLHA
        KI++ +L +D  +F++   D ++ANA RR +I+EVPT+AI+ V +  N+S++ DE +AHRLGL+P+  +        R  +  D D   E  ++ FRL +
Subjt:  KIEVIDLGEDDIEFDMIGIDPALANAFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVD-------PRLFEYSDEDTPNEKNTIVFRLHA

Query:  RCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATA
        +C   +  L VTS+ L               + P   P  +T  S   D+           +   III +L  GQE++L A A KG+GK HAKWSP AT 
Subjt:  RCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATA

Query:  WYRMLPEVVLLEEIEDELAEELK----SKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECI-RGEAWEK--RVSLRRVKNHFIFKIESTGALPPEVLFT
         +   P++++ E++ D L++E K       P  VF ++ +    ++  V  P + T   E I + EA  K   + +    + FIF +ESTGA+    L  
Subjt:  WYRMLPEVVLLEEIEDELAEELK----SKCPVDVFDIEDIANGKKRATVTRPRSCTLCRECI-RGEAWEK--RVSLRRVKNHFIFKIESTGALPPEVLFT

Query:  EAIKILEDKCE
         AI +L+ K +
Subjt:  EAIKILEDKCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCTAAAGATAAGAGATCGCGTGATATATTGGGCTCAAAATTTGAACAATGTGTGGGCAAAGAAGGCATTGAATGGATAATGAATCTTCCAGACGTGCCCATGAA
GCTCCCACCGCACTTGGAATTGCATAGGACCAGAGAATGCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATATGCTTCGATGGGTGTTGATA
ACAGTTTACAATTGGATTATTTTCGCAACAACTTTAAAATTGAAGTGATTGATCTAGGAGAGGATGACATTGAGTTTGACATGATTGGTATTGACCCGGCACTCGCTAAT
GCGTTTCGAAGAACCCTTATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACGTCAATAATCCAAGATGAAGTGCTTGCCCATAGGTTAGG
CCTCGTTCCGATTCATGTTGATCCAAGGCTTTTTGAGTACTCAGATGAAGACACACCAAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAACGTGGAA
AACCTCGTCTTACAGTGACATCAAAAGCATTGACGTGGTTACCTAATGGTAGTGAATTTCCTTTGGTATCGGACAAATCAGTTCCAAACTCAAAACCCAAAACCTATACT
TCTTTTAGTTGCAGCCAAGATGCGCTACCAGAATTTTCCAAAAATCCAATTGGTCCGAAAGACAGTGATATTATAATTGCTAGACTTTGCCCGGGTCAGGAAATTGAACT
TGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTATAGGATGCTTCCAGAGGTTGTACTTTTGGAGGAGATAGAGG
ATGAGTTGGCTGAAGAACTCAAAAGTAAATGTCCTGTTGATGTATTTGACATTGAAGACATTGCTAATGGTAAGAAAAGGGCAACTGTAACACGCCCACGATCTTGCACA
TTATGTAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGTGTGAAGAATCATTTCATTTTTAAGATTGAATCAACCGGAGCTTTACCTCCTGA
GGTGCTGTTCACTGAAGCTATAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCTAAAGATAAGAGATCGCGTGATATATTGGGCTCAAAATTTGAACAATGTGTGGGCAAAGAAGGCATTGAATGGATAATGAATCTTCCAGACGTGCCCATGAA
GCTCCCACCGCACTTGGAATTGCATAGGACCAGAGAATGCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATATGCTTCGATGGGTGTTGATA
ACAGTTTACAATTGGATTATTTTCGCAACAACTTTAAAATTGAAGTGATTGATCTAGGAGAGGATGACATTGAGTTTGACATGATTGGTATTGACCCGGCACTCGCTAAT
GCGTTTCGAAGAACCCTTATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACGTCAATAATCCAAGATGAAGTGCTTGCCCATAGGTTAGG
CCTCGTTCCGATTCATGTTGATCCAAGGCTTTTTGAGTACTCAGATGAAGACACACCAAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAACGTGGAA
AACCTCGTCTTACAGTGACATCAAAAGCATTGACGTGGTTACCTAATGGTAGTGAATTTCCTTTGGTATCGGACAAATCAGTTCCAAACTCAAAACCCAAAACCTATACT
TCTTTTAGTTGCAGCCAAGATGCGCTACCAGAATTTTCCAAAAATCCAATTGGTCCGAAAGACAGTGATATTATAATTGCTAGACTTTGCCCGGGTCAGGAAATTGAACT
TGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTATAGGATGCTTCCAGAGGTTGTACTTTTGGAGGAGATAGAGG
ATGAGTTGGCTGAAGAACTCAAAAGTAAATGTCCTGTTGATGTATTTGACATTGAAGACATTGCTAATGGTAAGAAAAGGGCAACTGTAACACGCCCACGATCTTGCACA
TTATGTAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGTGTGAAGAATCATTTCATTTTTAAGATTGAATCAACCGGAGCTTTACCTCCTGA
GGTGCTGTTCACTGAAGCTATAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGATTCTTGTCATGGATAACCAATATAGATCAACTTATTATTC
CATTATATTTACAAGTCACAAATTTTTGTAGTATGCGAGCTCTGATCTTCTATTTTTCTTTTGAAAAGAAAGTGGAACAGCAAGTCTTGTTGGGCCCAATTTTAAGAATG
CCAAAGGAGATCCCGAGGCCTTCGTTATGTTAAATCAAGAATACCAGAAGAATTAATTACAAAACAGGCCTGCACAAACTCGAGAGAACTCGGGATAAAACCTCTCCAAT
GCTCTCTGTTTACGCTGTCCCTAGCGAAAATTACATAATAGAAAAACTCTTGCCGTGGTGCGATTAGGCAGCGAGTCCAATAGTACGGGAGTATCATTTTTAATACGGTA
GTGATGTGGGAAATAGTGAATGAAAGAGAGTATGGTACTTTTATAGTACCAAAAAATTTCCTTGCAACTACAAGTGCAAGTGACCAAGTTGTGAGCTGGAGCTGATTGCT
TTTGATTTTCAAATTATTCATGATTATTTGAATTATTATGTTTTTTGTCTTTTATTTTTTGAGTACAATTTGAGAGCATGGAAGTTTGAATCTTCGATCTCAAAAGGAGT
AGGTGTCAATTATTGTTGAGATATACTTATGTTGACTTGAATTATTATGTTTTTAATGTTTC
Protein sequenceShow/hide protein sequence
MSAKDKRSRDILGSKFEQCVGKEGIEWIMNLPDVPMKLPPHLELHRTRECKADAPIHTDTIQYSGAYASMGVDNSLQLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALAN
AFRRTLIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLVPIHVDPRLFEYSDEDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYT
SFSCSQDALPEFSKNPIGPKDSDIIIARLCPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKSKCPVDVFDIEDIANGKKRATVTRPRSCT
LCRECIRGEAWEKRVSLRRVKNHFIFKIESTGALPPEVLFTEAIKILEDKCERLIAELS