; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g2057 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g2057
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionU6 snRNA phosphodiesterase
Genome locationMC06:28055730..28060479
RNA-Seq ExpressionMC06g2057
SyntenyMC06g2057
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008467330.1 PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]1.27e-14875.77Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPP----------PPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKK
        MDAL+ASY GSSSDEE D VS + +  S P          P    LPPPPLSLL+FPNS   L DLPI Q TR RSFPHV+GNYALHVYIPVY+PT ++K
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPP----------PPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKK

Query:  EVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEII
        EV LF+KK+SSLVP+LHLVDID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ  RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  AGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMA-PSKRCIFTTKFSGIECKIGKKTYKICKSPDE
         GGLMEIRKQIQVVNEVYK HNLPEFYKE RPHISLAWALGD+S++ S+ V +++KRS++  P KRCIFTTKF+GIECKIGKK YKICK  DE
Subjt:  AGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMA-PSKRCIFTTKFSGIECKIGKKTYKICKSPDE

XP_022155865.1 U6 snRNA phosphodiesterase [Momordica charantia]3.15e-200100Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS
        MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS

Query:  SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ
        SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ
Subjt:  SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ

Query:  IQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE
        IQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE
Subjt:  IQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE

XP_022928923.1 U6 snRNA phosphodiesterase [Cucurbita moschata]1.12e-14777.32Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPS--------LPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEV
        M+AL ASY GSSSDE+ D VS + +  S   P  S        LPPPPLSLLDFPNS SAL DLPI Q  R RSFPHV+GNYALH+YIPVYI T ++KEV
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPS--------LPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEV

Query:  VLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
         LFLKK+S LVP+LHLVDID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  VLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAP-SKRCIFTTKFSGIECKIGKKTYKICKSPDE
        GLMEIRK IQVVNEVYK HNLPEFYKE RPHISLAWALGDLSKLLS+ V D+MK+S +   SKR IFT KF+GIECKIGKK +KICK PDE
Subjt:  GLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAP-SKRCIFTTKFSGIECKIGKKTYKICKSPDE

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]2.55e-14976.79Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSL----------PPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKK
        M+AL ASY GSSSDE+ D VS + +  S     P L          PPPPLSLLDFPNS SAL DLPI Q  R RSFPHV+GNYA+H+YIPVYIPT ++K
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSL----------PPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKK

Query:  EVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEII
        EV LFLKK+S LVP+LHLVDID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  AGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAP-SKRCIFTTKFSGIECKIGKKTYKICKSPDE
        AGGLMEIRK IQVVNEVYK HNLPEFYKE RPHISLAWALGDLSKLLS+ V D+MK+S +   SKRCIFT KF+GIECKIGKK +KICK PDE
Subjt:  AGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAP-SKRCIFTTKFSGIECKIGKKTYKICKSPDE

XP_038875354.1 U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]1.18e-14977.66Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPS--------LPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEV
        MDAL+ASY GSSSDEE D VS + +  S   P  S        LPPP  SLL FPNS S L DLPI Q TR RSFPHV+GNYALH+YIPVY+PT  +KEV
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPS--------LPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEV

Query:  VLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
         LFLKKVSSLVP+LHLVDIDVPL  LCKD+HKLEQALAREFH+SLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  VLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSS-MAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE
        GLMEIRKQIQ+VNEVYK HNLPEFYKE RPHISLAWA+GDLSKLLS+ V ++MK S+ M   KRCIFTTKF GIECKIGKK YKICK PDE
Subjt:  GLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSS-MAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase1.45e-14775.43Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPP----------PPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKK
        MDAL+ASY GSSSDEE D VS   +  S P          P    LPPPPLSLL+FPNS   L DLPI Q TR RSFPHV+GNYALHVYIPVY+PT ++K
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPP----------PPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKK

Query:  EVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEII
        EV LF+KK+SSLVP+LHLVDID+PL  LCKD+ KLEQA AREFHISLSRTVPIRVHQIDSIV+MLRQKLQ  RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  AGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMA-PSKRCIFTTKFSGIECKIGKKTYKICKSPDE
         GGLMEIRKQIQVVNEVYK HNLPEFYKE RPHIS+AWALGD+S+L S+ V +++KRS++  P KRCIFTTKF+GIECKIGKK YKICK PDE
Subjt:  AGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMA-PSKRCIFTTKFSGIECKIGKKTYKICKSPDE

A0A1S3CTB0 U6 snRNA phosphodiesterase6.17e-14975.77Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPP----------PPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKK
        MDAL+ASY GSSSDEE D VS + +  S P          P    LPPPPLSLL+FPNS   L DLPI Q TR RSFPHV+GNYALHVYIPVY+PT ++K
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPP----------PPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKK

Query:  EVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEII
        EV LF+KK+SSLVP+LHLVDID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ  RRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  AGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMA-PSKRCIFTTKFSGIECKIGKKTYKICKSPDE
         GGLMEIRKQIQVVNEVYK HNLPEFYKE RPHISLAWALGD+S++ S+ V +++KRS++  P KRCIFTTKF+GIECKIGKK YKICK  DE
Subjt:  AGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMA-PSKRCIFTTKFSGIECKIGKKTYKICKSPDE

A0A6J1DNL4 U6 snRNA phosphodiesterase1.52e-200100Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS
        MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS

Query:  SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ
        SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ
Subjt:  SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ

Query:  IQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE
        IQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE
Subjt:  IQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE

A0A6J1EQH7 U6 snRNA phosphodiesterase5.42e-14877.32Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPS--------LPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEV
        M+AL ASY GSSSDE+ D VS + +  S   P  S        LPPPPLSLLDFPNS SAL DLPI Q  R RSFPHV+GNYALH+YIPVYI T ++KEV
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPS--------LPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEV

Query:  VLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
         LFLKK+S LVP+LHLVDID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  VLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAP-SKRCIFTTKFSGIECKIGKKTYKICKSPDE
        GLMEIRK IQVVNEVYK HNLPEFYKE RPHISLAWALGDLSKLLS+ V D+MK+S +   SKR IFT KF+GIECKIGKK +KICK PDE
Subjt:  GLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAP-SKRCIFTTKFSGIECKIGKKTYKICKSPDE

A0A6J1HYN3 U6 snRNA phosphodiesterase3.87e-14776.09Show/hide
Query:  MDALKASYRGSSSDEEDDIVS------TAPSDLSPPPPPPS--------LPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPT
        M+AL ASY GSSSDE+ D VS      +A +  S   P  S        LPPPPLSLLDFPNS SAL DLPI Q  R RSFPHV+GNYA+H+YIPVYIPT
Subjt:  MDALKASYRGSSSDEEDDIVS------TAPSDLSPPPPPPS--------LPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPT

Query:  TSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLS
         ++KEV LFLKK+S LVP+LHLVDID+PL  LCKD+ KLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKWETFVNDDLSRTFLS
Subjt:  TSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIIAGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAP-SKRCIFTTKFSGIECKIGKKTYKICKSPDE
        MEIIAGGLMEIRK+IQVVNEVYK HNLPEFYKE RPHISLAWALGDLSKLLS+ V D+MK+S +   SKRCIFT KF+GIECKIGKK +KICK PDE
Subjt:  MEIIAGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAP-SKRCIFTTKFSGIECKIGKKTYKICKSPDE

SwissProt top hitse value%identityAlignment
Q5I0I5 U6 snRNA phosphodiesterase2.3e-1525.36Show/hide
Query:  SSSDEEDDIVSTAPSDLSP----------PPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS
        SSS  ED+  + A     P          P P    P P   L  FP++     D       R R+FPH  GN+A H+YIP       +  + + L +  
Subjt:  SSSDEEDDIVSTAPSDLSP----------PPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS

Query:  SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ
           P L  ++                     EFH+SLS++V +R H I   V +L+ ++   +R++   ++ + + N + +RTF+ +E ++ G  +    
Subjt:  SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ

Query:  IQVVNEVYKFHNLPEFYKEERPHISLAWALGD------------LSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECK
        +  V+ V K  +L  FY++   H+SLAW +GD            L +++    D +M    +A   RC    KF  +  K
Subjt:  IQVVNEVYKFHNLPEFYKEERPHISLAWALGD------------LSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECK

Q6DEF6 U6 snRNA phosphodiesterase4.7e-1633.17Show/hide
Query:  PSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREF
        P LP P      F +S     D       R RSF H  GN+A +V+ P Y P  +  EV   L K+ +   +      D+PLT            ++ EF
Subjt:  PSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREF

Query:  HISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG--GLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALG
        H+SLS+TV +R H I   V  +R  L   ++++    K + + N + +RTFL ME+  G   L+E+ K   +V+E  K  NL  FY++   HISLAW +G
Subjt:  HISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG--GLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALG

Query:  DLSKLLSR
        D ++ L +
Subjt:  DLSKLLSR

Q7ZYI9 U6 snRNA phosphodiesterase6.6e-1829.24Show/hide
Query:  SSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLP--IAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHL
        SSS+E++   S  P    PP PPP+      ++L     +    DL        R RSF H  GN+A +VYIP                      P    
Subjt:  SSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLP--IAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHL

Query:  VDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVY
        +D+   L S+  +   L   ++ EFHIS S+TV +R H I+  V  L+ KL C  R+     + + + N + +RTFL +E ++ G+  + + +  V+   
Subjt:  VDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVY

Query:  KFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCI-------FTTKFSG--IECKIGKKTYKI
        +  NL  FY+E   H+SLAW +GD          +K+K S +   ++ I         T+F+   I CK G KT+ I
Subjt:  KFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCI-------FTTKFSG--IECKIGKKTYKI

Q91W78 U6 snRNA phosphodiesterase9.5e-1726.43Show/hide
Query:  SSSDEEDDIVSTAPSDLSP----------PPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS
        SSS  ED+  + A     P          P P   LP P   L  FP++     D       R R+FPH  GN+A H+YIP       +  +   L +  
Subjt:  SSSDEEDDIVSTAPSDLSP----------PPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVS

Query:  SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ
          VP L L++                     EFH+SLS++V +R H I   V +L+ ++   +R++   ++ + + N + +RTF+ +E ++ G  +    
Subjt:  SLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQ

Query:  IQVVNEVYKFHNLPEFYKEERPHISLAWALGD------------LSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECK
        +  V+   K  +L  FY++   HISLAW +GD            L +++    D +M    +A   RC    KF  +  K
Subjt:  IQVVNEVYKFHNLPEFYKEERPHISLAWALGD------------LSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECK

Q9BQ65 U6 snRNA phosphodiesterase4.4e-1427.88Show/hide
Query:  SSDEEDDIVSTAPSDLS-----PPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSL
        S DE +D + T P D S      P P    P P   L  FP +     D       R R+FPH  GN+A HVY+P          + + L    + VP L
Subjt:  SSDEEDDIVSTAPSDLS-----PPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSL

Query:  HLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNE
          + +                     FH+SLS++V +R H I   V  L+ ++    R++   ++ + + N + +RTF+ +E+ +G   +    +  V+ 
Subjt:  HLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNE

Query:  VYKFHNLPEFYKEERPHISLAWALGD
        V +  NL  FY++   H+SLAW +GD
Subjt:  VYKFHNLPEFYKEERPHISLAWALGD

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein2.1e-8859.59Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPP---------SLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKE
        M+AL+ASY  SSSD + D       DLSP  P           SLPPPPL+LLD   S  +L         R R+FPHV+GNYALHVY+PV IP   KKE
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPP---------SLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKE

Query:  VVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIA
        +V FLKKV+S+VP LHLV+ DVPL+ LCKD+ K E+AL REFHISL R VP+RVHQI+S++SMLRQKLQ Q+RY IDF+KWE FVNDD +R+FLS+EI  
Subjt:  VVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIA

Query:  GGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPS-KRCIFTTKFSGIECKIGKKTYKICKSPDE
         GL EI KQI  VNEVYK HNLPEFYK+ RPHISL WALGD+   L   VD ++++       +  IFT+KF GIECKIG KT+KICK PDE
Subjt:  GGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISLAWALGDLSKLLSRVVDDKMKRSSMAPS-KRCIFTTKFSGIECKIGKKTYKICKSPDE

AT5G51170.2 unknown protein6.7e-5856.81Show/hide
Query:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPP---------SLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKE
        M+AL+ASY  SSSD + D       DLSP  P           SLPPPPL+LLD   S  +L         R R+FPHV+GNYALHVY+PV IP   KKE
Subjt:  MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPP---------SLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKE

Query:  VVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIA
        +V FLKKV+S+VP LHLV+ DVPL+ LCKD+ K E+AL REFHISL R VP+RVHQI+S++SMLRQKLQ Q+RY IDF+KWE FVNDD +R+FLS+EI  
Subjt:  VVLFLKKVSSLVPSLHLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIA

Query:  GGLMEIRKQIQVV
         GL E+  ++ ++
Subjt:  GGLMEIRKQIQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTCTGAAGGCCTCGTATAGAGGCAGCTCGTCGGATGAAGAAGACGACATAGTCTCAACTGCACCGTCAGACTTGTCGCCGCCGCCGCCGCCTCCGTCTCTGCC
ACCGCCGCCTCTCTCGCTTCTCGATTTTCCCAATTCCATCTCCGCGTTACATGACTTACCAATCGCTCAGCCCACTAGATTTCGGAGCTTCCCTCATGTTGAAGGAAACT
ATGCCCTACACGTCTATATTCCAGTTTATATACCAACTACATCAAAGAAGGAGGTGGTCCTGTTTTTGAAGAAAGTCTCCTCACTTGTGCCCTCTCTCCATCTTGTTGAT
ATTGACGTTCCTTTGACCTCTTTATGCAAAGATGAGCACAAGCTTGAGCAAGCCTTGGCCAGAGAATTTCACATAAGTTTATCAAGAACAGTGCCAATCCGAGTGCACCA
GATTGACTCAATAGTGTCAATGCTTCGTCAGAAGCTTCAGTGTCAAAGGCGTTATTGGATTGATTTTAGCAAGTGGGAGACTTTTGTTAATGATGACCTCTCTCGGACCT
TCCTGTCAATGGAAATTATCGCTGGAGGGCTAATGGAGATAAGAAAACAGATTCAAGTTGTTAATGAGGTTTATAAGTTCCACAATCTTCCTGAATTTTACAAGGAAGAG
AGGCCACATATATCCTTAGCCTGGGCATTAGGTGACCTTAGTAAATTATTGAGTCGTGTAGTTGACGACAAAATGAAGAGGTCCTCCATGGCACCATCAAAGAGATGTAT
TTTCACCACTAAATTCAGTGGCATTGAATGTAAGATTGGTAAAAAAACGTATAAAATATGTAAATCTCCAGATGAATAA
mRNA sequenceShow/hide mRNA sequence
CTCTCTTACCTTTACAAAATGGTTTTAAAAAATTCCTAGAACTAACGTAACGCTGCTGATGTGGTATTGATATTTATTAATTTTATATTTTTAAATTATTTGTCATTTTT
TTCCTATTTTTGTCTTTGATTCTCTCTCATTTTCCCCCTTCTCTCTTATCAGACCCATCAACGAGTGGGGAGTATGTGCCCTTTTGTGTTACATTAAATTTTCACAGATC
GTTTTTCGAATCCATTTCGTCCCCCAATATGCAGAGCTTGAAATTCCCACTATTTCCTGTGGGTTCTATTCCTATGCAAAACCCTCTTACCCAGAAGCTCAATTATCTCC
CTCTTCGTCTTCAACCCTCATCTGAAATTCCGAATGCCGCGAAGTGCCGTTTCTCTCGAACCCACAGTTCCACTTACCCAGAAGCCCAATTCTCTCCCTTGCTTCACTGA
ACTTCCATCTCGCCCATAATTTGACCGAAGTTTTGAGCTTCATCGTCCAATTTTCCCCCCAACTATTAGAACTTGTAGAGAGAGGAAGAGAGACCTACGAGAAGGATGAA
GAGGGGAGAAAGAGGGAGAGAAGGGGAACAGGAGAGAAAATTAAAGAAAAATGGGAAAAAATGACAAATAATTTTAAAAATATAAAATTAATAAATATCAGTGCCACATC
AGCCTTCCGTGTTAACCTAGGTATTATTTTATAAATATTTTAAAAAATCAAATGGATTATGATTCAATGGCTGAAACAACAAACCAATTCAATTGAGATATTTTATGTCA
AAATCCATTAATCAAATATTTAAACCAACCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGATGGATGCTCTGAAGGCCTCGTATAGAGGCAGC
TCGTCGGATGAAGAAGACGACATAGTCTCAACTGCACCGTCAGACTTGTCGCCGCCGCCGCCGCCTCCGTCTCTGCCACCGCCGCCTCTCTCGCTTCTCGATTTTCCCAA
TTCCATCTCCGCGTTACATGACTTACCAATCGCTCAGCCCACTAGATTTCGGAGCTTCCCTCATGTTGAAGGAAACTATGCCCTACACGTCTATATTCCAGTTTATATAC
CAACTACATCAAAGAAGGAGGTGGTCCTGTTTTTGAAGAAAGTCTCCTCACTTGTGCCCTCTCTCCATCTTGTTGATATTGACGTTCCTTTGACCTCTTTATGCAAAGAT
GAGCACAAGCTTGAGCAAGCCTTGGCCAGAGAATTTCACATAAGTTTATCAAGAACAGTGCCAATCCGAGTGCACCAGATTGACTCAATAGTGTCAATGCTTCGTCAGAA
GCTTCAGTGTCAAAGGCGTTATTGGATTGATTTTAGCAAGTGGGAGACTTTTGTTAATGATGACCTCTCTCGGACCTTCCTGTCAATGGAAATTATCGCTGGAGGGCTAA
TGGAGATAAGAAAACAGATTCAAGTTGTTAATGAGGTTTATAAGTTCCACAATCTTCCTGAATTTTACAAGGAAGAGAGGCCACATATATCCTTAGCCTGGGCATTAGGT
GACCTTAGTAAATTATTGAGTCGTGTAGTTGACGACAAAATGAAGAGGTCCTCCATGGCACCATCAAAGAGATGTATTTTCACCACTAAATTCAGTGGCATTGAATGTAA
GATTGGTAAAAAAACGTATAAAATATGTAAATCTCCAGATGAATAAGAGGAACATGATAAATTTGTACGAGTATTATATTGCTTTCTTGGTATACCCATGAAATTATTTC
TAGTTATTTGGGTCTTTTCAAAACCTCATTAACATACCAAGAAAGTAAAACAACTTTCTTTCTGTTCTGCAGAGGTTTCTCTTTTATAGTCTTCCATGATATTTAATTGT
GAAGCTTTGTTTCTATGATTTTTAGGGTGTACATTCTTGGCACCATTGATATAAAAGAGCTCCGGAATCATGTTAGGAAATGGAGGGAACACTGGGAGTTTGCGAGTAGA
TAATCTTCTAAAAGAGGGAGAAAATGACAAAACAAAAGGAAG
Protein sequenceShow/hide protein sequence
MDALKASYRGSSSDEEDDIVSTAPSDLSPPPPPPSLPPPPLSLLDFPNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSLHLVD
IDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKFHNLPEFYKEE
RPHISLAWALGDLSKLLSRVVDDKMKRSSMAPSKRCIFTTKFSGIECKIGKKTYKICKSPDE