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MC06g2059 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g2059
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box/LRR-repeat protein
Genome locationMC06:28084634..28084915
RNA-Seq ExpressionMC06g2059
SyntenyMC06g2059
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649006.1 hypothetical protein Csa_008454 [Cucumis sativus]7.14e-1240.22Show/hide
Query:  PNLKSVQFYNVVPCVKSASEFLCIHEIHI-LVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK
        P L+++ F NV+P VKS  EF  I ++ I LV  +E  +R   +    +LL VFH A SFTLP   T  +    +    CF N+KHL+ +TK
Subjt:  PNLKSVQFYNVVPCVKSASEFLCIHEIHI-LVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK

XP_004141639.1 F-box/LRR-repeat protein At3g26922 [Cucumis sativus]7.09e-1240.22Show/hide
Query:  PNLKSVQFYNVVPCVKSASEFLCIHEIHI-LVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK
        P L+++ F NV+P VKS  EF  I ++ I LV  +E  +R   +    +LL VFH A SFTLP   T  +    +    CF N+KHL+ +TK
Subjt:  PNLKSVQFYNVVPCVKSASEFLCIHEIHI-LVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]1.85e-1141.05Show/hide
Query:  PNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHY----EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK
        P LK+V F NV+P ++S SEF CI ++ I ++      +    Q+++     LL V HNA+SFTLP   TQV+     LS   F N++HL+ KTK
Subjt:  PNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHY----EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]1.51e-3161.46Show/hide
Query:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHILV-RHY--EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKT
        +C PNL+SV+F NV+PC+KSASEF+C+H+++I V  +Y    RN+QK++EN+S+LLRVFHNATSFTLP N  QV+FK+PSL+G  F NL+HL+F+T
Subjt:  MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHILV-RHY--EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKT

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]1.96e-1245.26Show/hide
Query:  PNLKSVQFYNVVPCVKSASEFLCIHEIHILVRH--YEP--RNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK
        P L++V F NV+P VKS SEF CIH++ I ++   +E      QK++ N  +LL VFHNA SFTLP   T V+     L    F N+ HL+ KTK
Subjt:  PNLKSVQFYNVVPCVKSASEFLCIHEIHILVRH--YEP--RNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK

TrEMBL top hitse value%identityAlignment
A0A061FRY8 F-box/RNI-like superfamily protein3.63e-0634.69Show/hide
Query:  APNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHYEPRNRQKMEENISKLLRV---FHNATSFTLPSNTTQVLFKAPSLSG---FCFPNLKHLKFKTK
        AP L + ++  + P V        + +++  ++   P  ++  EE++ +L++    F +A S TL S+T QVL K PSL G   F F NLKHLK K K
Subjt:  APNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHYEPRNRQKMEENISKLLRV---FHNATSFTLPSNTTQVLFKAPSLSG---FCFPNLKHLKFKTK

A0A0A0KSW6 F-box domain-containing protein4.09e-1240.22Show/hide
Query:  PNLKSVQFYNVVPCVKSASEFLCIHEIHI-LVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK
        P L+++ F NV+P VKS  EF  I ++ I LV  +E  +R   +    +LL VFH A SFTLP   T  +    +    CF N+KHL+ +TK
Subjt:  PNLKSVQFYNVVPCVKSASEFLCIHEIHI-LVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X18.95e-1241.05Show/hide
Query:  PNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHY----EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK
        P LK+V F NV+P ++S SEF CI ++ I ++      +    Q+++     LL V HNA+SFTLP   TQV+     LS   F N++HL+ KTK
Subjt:  PNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHY----EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK

A0A5A7TCF1 F-box/LRR-repeat protein7.24e-0742.67Show/hide
Query:  PNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHY----EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQ-VLF
        P LK+V F NV+P ++S SEF CI ++ I ++      +    Q+++     LL V HNA+SFTLP   TQ VLF
Subjt:  PNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHY----EPRNRQKMEENISKLLRVFHNATSFTLPSNTTQ-VLF

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like1.06e-0641.89Show/hide
Query:  CAPNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHYEPRNR-----QKMEENISKLLRVFHNATSFTLPSNTTQ
        C  +L++V F N++P V SA EF CI +++I V +Y+  +      Q      S+L RVFHNA SF LP   TQ
Subjt:  CAPNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHYEPRNR-----QKMEENISKLLRVFHNATSFTLPSNTTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCCCCAAATCTCAAAAGTGTCCAGTTTTACAATGTTGTGCCTTGTGTAAAATCTGCTTCTGAGTTTCTGTGCATACACGAAATACATATATTAGTTCGTCATTA
TGAACCCAGAAACCGGCAAAAGATGGAGGAAAATATCTCTAAATTGCTTAGAGTTTTTCATAATGCAACTTCTTTTACGCTGCCGTCCAATACAACACAGGTTCTGTTTA
AAGCTCCTTCTTTAAGCGGGTTTTGTTTTCCTAATTTGAAACATTTGAAGTTCAAAACAAAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCCCCAAATCTCAAAAGTGTCCAGTTTTACAATGTTGTGCCTTGTGTAAAATCTGCTTCTGAGTTTCTGTGCATACACGAAATACATATATTAGTTCGTCATTA
TGAACCCAGAAACCGGCAAAAGATGGAGGAAAATATCTCTAAATTGCTTAGAGTTTTTCATAATGCAACTTCTTTTACGCTGCCGTCCAATACAACACAGGTTCTGTTTA
AAGCTCCTTCTTTAAGCGGGTTTTGTTTTCCTAATTTGAAACATTTGAAGTTCAAAACAAAG
Protein sequenceShow/hide protein sequence
MCAPNLKSVQFYNVVPCVKSASEFLCIHEIHILVRHYEPRNRQKMEENISKLLRVFHNATSFTLPSNTTQVLFKAPSLSGFCFPNLKHLKFKTK