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MC06g2109 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g2109
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box/LRR-repeat protein
Genome locationMC06:28583103..28583348
RNA-Seq ExpressionMC06g2109
SyntenyMC06g2109
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]2.81e-1858.43Show/hide
Query:  MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAG--KDSHRPHYST-----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+N TPPSLF FL +  ILL  TPL A+RRL  +A     DS RP  +T     +PP AV+D  T  S+NY VSLRKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAG--KDSHRPHYST-----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

KAB2066894.1 hypothetical protein ES319_A09G189700v1 [Gossypium barbadense]6.12e-0439.47Show/hide
Query:  PSLFFFLLLLTILLAATPLSASRRLSTAA--AGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        PS F  LL+L ++LA   LS+ R+L+ A+    K S   H+S+    +V  N+   +  + VS + VP GPNPLHN
Subjt:  PSLFFFLLLLTILLAATPLSASRRLSTAA--AGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

KAG4184591.1 hypothetical protein ERO13_A09G180600v2 [Gossypium hirsutum]1.53e-0439.47Show/hide
Query:  PSLFFFLLLLTILLAATPLSASRRLSTAA--AGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        PS F  LL+L ++LA   LS+ R+L+ A+    K S   H+S+    +V  N+   +  + VS + VP GPNPLHN
Subjt:  PSLFFFLLLLTILLAATPLSASRRLSTAA--AGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]3.28e-1253.93Show/hide
Query:  MASKNP-TPPSLFFFLLLLTILLAATPLSASRRLSTAAAG--KDSHRPHYST----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+NP T   LF F++LLT      PLSA RRLSTA      DS  P  ++    +PP  VE+     SQNYAVS RKVPAGPNPLHN
Subjt:  MASKNP-TPPSLFFFLLLLTILLAATPLSASRRLSTAAAG--KDSHRPHYST----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]2.42e-1550.55Show/hide
Query:  MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAGKDS-----HRPHYST----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+N  PP+  F  L + +L   TPL A+RR  T+A   ++     H P  ST    +PP AVED  T  S+NY VSLRKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAGKDS-----HRPHYST----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein1.17e-1550.55Show/hide
Query:  MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAGKDS-----HRPHYST----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+N  PP+  F  L + +L   TPL A+RR  T+A   ++     H P  ST    +PP AVED  T  S+NY VSLRKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAGKDS-----HRPHYST----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

A0A2P2QBS8 Uncharacterized protein1.22e-0439.53Show/hide
Query:  PPSLFFFLLLLTILLAATPLSASRRLSTAAAGKDSHRP-----------HYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        P S F FL+ L ILLA + LS+ R L  +  G++S  P           H+S + P     N    +  Y  S R VPAGPNPLHN
Subjt:  PPSLFFFLLLLTILLAATPLSASRRLSTAAAGKDSHRP-----------HYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein1.36e-1858.43Show/hide
Query:  MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAG--KDSHRPHYST-----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        MAS+N TPPSLF FL +  ILL  TPL A+RRL  +A     DS RP  +T     +PP AV+D  T  S+NY VSLRKVPAGPNPLHN
Subjt:  MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAG--KDSHRPHYST-----EPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

A0A5D2P6R7 Uncharacterized protein2.96e-0439.47Show/hide
Query:  PSLFFFLLLLTILLAATPLSASRRLSTAA--AGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        PS F  LL+L ++LA   LS+ R+L+ A+    K S   H+S+    +V  N+   +  + VS + VP GPNPLHN
Subjt:  PSLFFFLLLLTILLAATPLSASRRLSTAA--AGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

A0A5J5UHJ6 Uncharacterized protein2.96e-0439.47Show/hide
Query:  PSLFFFLLLLTILLAATPLSASRRLSTAA--AGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN
        PS F  LL+L ++LA   LS+ R+L+ A+    K S   H+S+    +V  N+   +  + VS + VP GPNPLHN
Subjt:  PSLFFFLLLLTILLAATPLSASRRLSTAA--AGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAAAACCCCACTCCTCCCTCTCTCTTCTTCTTCCTCCTCCTCCTCACAATTCTCCTCGCCGCCACCCCTCTCTCCGCCTCCCGCCGCCTCTCCACCGCCGC
CGCCGGTAAGGATTCCCACCGTCCGCATTACTCCACGGAGCCGCCGCTCGCCGTGGAAGACAACACCACGCCTCAAAGTCAAAACTACGCCGTTTCGCTCCGCAAAGTCC
CGGCCGGTCCGAACCCACTACATAAC
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAAAACCCCACTCCTCCCTCTCTCTTCTTCTTCCTCCTCCTCCTCACAATTCTCCTCGCCGCCACCCCTCTCTCCGCCTCCCGCCGCCTCTCCACCGCCGC
CGCCGGTAAGGATTCCCACCGTCCGCATTACTCCACGGAGCCGCCGCTCGCCGTGGAAGACAACACCACGCCTCAAAGTCAAAACTACGCCGTTTCGCTCCGCAAAGTCC
CGGCCGGTCCGAACCCACTACATAAC
Protein sequenceShow/hide protein sequence
MASKNPTPPSLFFFLLLLTILLAATPLSASRRLSTAAAGKDSHRPHYSTEPPLAVEDNTTPQSQNYAVSLRKVPAGPNPLHN