CuGenDBv2

Gene ID	MC06g2207
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	serine/arginine-rich splicing factor 11
Genome location	MC06:29435442..29439350
RNA-Seq Expression	MC06g2207
Synteny	MC06g2207
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

1.98e-83

91.26

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Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+Y+RS SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

1.35e-95

100

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022970036.1 probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita maxima]

7.17e-81

91.8

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Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSSSA+ +TSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSES+YSRS SSSQSEPE SGRSKRHKKND TKK  
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_023531665.1 probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita pepo subsp. pepo]

7.17e-81

91.8

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSSSA+ +TSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSES+YSRS SSSQSEPE SGRSKRHKKND TKK  
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

1.46e-85

91.8

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSSSATS+TSDSSSSSSRRRRRRR+RR+KDRD LR+RKKSRSHSKR RRHRRSSSDSLSSSDSES+YSR+ SSSQSEPETSGRSKRHK+NDR K+DK
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ3 Uncharacterized protein

1.36e-80

89.62

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSS+DSES+YSRS   S+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

9.59e-84

91.26

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+Y+RS SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

6.52e-96

100

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

3.47e-81

91.8

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSSSA+ +TSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSES+YSRS SSSQSEPE SGRSKRHKKND TKK  
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1I4D4 NKAP family protein isoform X2

1.94e-80

91.26

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK
        MAASSSSA+ +TSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSES+YSRS SSSQSEPE SGRSKRHKKND TKK  
Subjt:  MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         RERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

1.1e-34

63.78

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKK
        MAASSSS++S  S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+RRR R+ SSDS  SS S+S    S  SS SE E   +S+RHKK+++ KK
Subjt:  MAASSSSATSFTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKK

Query:  DKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         K++ERSKSH HKR K++ ++K   E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  DKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

AT5G27860.2 unknown protein

1.1e-34

63.78

Show/hide

Query:  MAASSSSATSFTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKK
        MAASSSS++S  S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+RRR R+ SSDS  SS S+S    S  SS SE E   +S+RHKK+++ KK
Subjt:  MAASSSSATSFTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKK

Query:  DKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         K++ERSKSH HKR K++ ++K   E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  DKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCGCCTCGTCTTCGTCGGCGACATCCTTCACTTCCGATTCATCGTCTTCTTCTTCTCGACGCCGCCGCCGGCGGAGAAGTCGCCGAGACAAAGATCGGGACGCCCT
TAGGATTCGCAAGAAGAGTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCATCCGATTCCCTCTCTTCCTCTGACTCTGAATCCGAATACTCCAGAAGTG
GTAGCTCGTCTCAAAGCGAGCCTGAAACCTCGGGTCGTTCAAAGCGGCATAAGAAGAATGATAGAACGAAGAAGGACAAGGAGAGAGAGCGAAGTAAGAGTCATCACCAT
AAAAGGCGTAAACATAAAGCTAAAGAGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTACAGCTTTCTAAGTTCCTAGCTCGTGAGAAGGATGATGGTGCCCGACGGAG
TGCTGTCTCTGGCAAAAAGATTTTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGATT
GA

mRNA sequence

Show/hide mRNA sequence

AAAAAAAAAAAGAAAAAGTAAAGAAAAAAATAGTATTTTAATAATTGTTTTCATATTTATTTATTATTTTAAAAGGATATTGAACTTAAATTTCCATAAAAGGCCCAAAG
TGTTAGGAATTACGATTCCTTTCCCCACATCTGTCTCTTAGCCCTTTGCCCTTTGGGGTTTTCTGTTTTCGAAACCGTAAGCTCTCTCTCTCTCTTCGATGGCCGCCTCG
TCTTCGTCGGCGACATCCTTCACTTCCGATTCATCGTCTTCTTCTTCTCGACGCCGCCGCCGGCGGAGAAGTCGCCGAGACAAAGATCGGGACGCCCTTAGGATTCGCAA
GAAGAGTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCATCCGATTCCCTCTCTTCCTCTGACTCTGAATCCGAATACTCCAGAAGTGGTAGCTCGTCTC
AAAGCGAGCCTGAAACCTCGGGTCGTTCAAAGCGGCATAAGAAGAATGATAGAACGAAGAAGGACAAGGAGAGAGAGCGAAGTAAGAGTCATCACCATAAAAGGCGTAAA
CATAAAGCTAAAGAGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTACAGCTTTCTAAGTTCCTAGCTCGTGAGAAGGATGATGGTGCCCGACGGAGTGCTGTCTCTGG
CAAAAAGATTTTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGATTGATGGCTGGGGG
CTGTGTTTGAAATGAAGGTAAGAGGCATTGATAGAATGGAATCACAGTGGTGTTGGGTTCAGTTGCAGTAGAAGAGACATTCAAGCCTGTGAACTTTCTTTCCTTGGATG
TTTTTATGCATATGAATAGAGATCAATTCTCATGGAAAAGAAATTGAAATTGAAATGAAATAAAAAAAAAAAATGATTTGCTTGTTTGATTAATTAATGGGATGGGATGG
GATGGGATGATTGGTTCTTATGATTAGCTTGTATGACTTTTAGAAATGATTGGAGAGAATTATTCACCATGTAAAATGATGAAAAGTTAATCATTTGCACTAATGCTTAG
TTGCTTACCTCTCTCTAGTATGTAAAGTATGTATTCAGGATCTTTTATGGTTGATAATAGAAGAAATTAGGTTTGGATGATAG

Protein sequence

Show/hide protein sequence

MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDKERERSKSHHH
KRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

MC06g2207 (gene) of Bitter gourd (Dali-11) v1 genome