; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC06g2222 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g2222
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionrho-N domain-containing protein 1, chloroplastic-like
Genome locationMC06:29545475..29546680
RNA-Seq ExpressionMC06g2222
SyntenyMC06g2222
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
InterPro domainsIPR011112 - Rho termination factor, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151986.1 rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus]8.35e-19876.41Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSD RC+PCSGVSGRAA  S  SL  EHRIN  VKF  LNCTSLG SFTC A+SGGHRRNPDF KQNRHGFSR RNRQNEER+ L+N++ESDLL SK
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLS+SS TPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKK+EAQG TKGSETVDSLLKLLRKHSVEQGKRSSG   S  KD SFN VKEN 
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEG+G+S FGLS NLREK Q        RP+SNFQR+SPVPRVKYQPIYPGE SIV ST G+NS+G+K NG +TGS++K KVW R+ES+RE W+ELQ 
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH-----EDLNSLKLAELRAIAKSRGLKRFSKIRKSELV
        QRE    P+PD EFELEPE E+Y+LEHE DEMEPELVNLL VSSDV+DTF+DDVKDNE F KH     EDLNSLKLAELRAIAKSR L+ FSK++KSELV
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH-----EDLNSLKLAELRAIAKSRGLKRFSKIRKSELV

Query:  QLLSEAQ
        QLLS  Q
Subjt:  QLLSEAQ

XP_022155658.1 rho-N domain-containing protein 1, chloroplastic-like isoform X1 [Momordica charantia]1.90e-275100Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSE
        QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSE
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSE

Query:  AQ
        AQ
Subjt:  AQ

XP_022155659.1 rho-N domain-containing protein 1, chloroplastic-like isoform X2 [Momordica charantia]5.04e-27299.5Show/hide
Query:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
        ++DGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
Subjt:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP

Query:  LLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD
        LLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD
Subjt:  LLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD

Query:  EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE
        EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE
Subjt:  EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE

Query:  TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSEAQ
        TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSEAQ
Subjt:  TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSEAQ

XP_038887988.1 rho-N domain-containing protein 1, chloroplastic-like isoform X1 [Benincasa hispida]9.87e-20479.8Show/hide
Query:  FGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKN
        FGLSD RC+PCSGVSGRAA VSSRSL  EHRI+A+VKF  LNCTSLGASFTC A+SGGHRRNPDFSKQNRHGFSR RNRQNEER+ L+N++ESDLLSSKN
Subjt:  FGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKN

Query:  GPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGG---KDFSFNQVKE
        GPLLS+SS TPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKK+EAQG TKGSETVDSLLKLLRKHSVEQGKRSSG  S GG   KDF+FN VKE
Subjt:  GPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGG---KDFSFNQVKE

Query:  NDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREES-KRESWKE
        N  YDEGKGTSIFGLSANLREK QEPT  SFSRP+SNFQRKSPVPRVKYQPI+PGE SIV+ST GVNS+G+K NG ET S++K+KVW R+ES +R  W+E
Subjt:  NDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREES-KRESWKE

Query:  LQPQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH---EDLNSLKLAELRAIAKSRGLKRFSKIRKSEL
        LQ Q ET   P+ D E+ELEPE ESYELEH+PDE E ELVNLL VSSD++DTFDDDVKDNE F KH   EDLNSLK+AELRAIAKSR LK FSK++KSEL
Subjt:  LQPQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH---EDLNSLKLAELRAIAKSRGLKRFSKIRKSEL

Query:  VQLLSE
        VQLLS+
Subjt:  VQLLSE

XP_038887989.1 rho-N domain-containing protein 1, chloroplastic-like isoform X2 [Benincasa hispida]1.58e-20179.46Show/hide
Query:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
        L+D RC+PCSGVSGRAA VSSRSL  EHRI+A+VKF  LNCTSLGASFTC A+SGGHRRNPDFSKQNRHGFSR RNRQNEER+ L+N++ESDLLSSKNGP
Subjt:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP

Query:  LLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGG---KDFSFNQVKEND
        LLS+SS TPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKK+EAQG TKGSETVDSLLKLLRKHSVEQGKRSSG  S GG   KDF+FN VKEN 
Subjt:  LLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGG---KDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREES-KRESWKELQ
         YDEGKGTSIFGLSANLREK QEPT  SFSRP+SNFQRKSPVPRVKYQPI+PGE SIV+ST GVNS+G+K NG ET S++K+KVW R+ES +R  W+ELQ
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREES-KRESWKELQ

Query:  PQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH---EDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQ
         Q ET   P+ D E+ELEPE ESYELEH+PDE E ELVNLL VSSD++DTFDDDVKDNE F KH   EDLNSLK+AELRAIAKSR LK FSK++KSELVQ
Subjt:  PQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH---EDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQ

Query:  LLSE
        LLS+
Subjt:  LLSE

TrEMBL top hitse value%identityAlignment
A0A0A0L7X8 Rho_N domain-containing protein4.04e-19876.41Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSD RC+PCSGVSGRAA  S  SL  EHRIN  VKF  LNCTSLG SFTC A+SGGHRRNPDF KQNRHGFSR RNRQNEER+ L+N++ESDLL SK
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLS+SS TPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKK+EAQG TKGSETVDSLLKLLRKHSVEQGKRSSG   S  KD SFN VKEN 
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEG+G+S FGLS NLREK Q        RP+SNFQR+SPVPRVKYQPIYPGE SIV ST G+NS+G+K NG +TGS++K KVW R+ES+RE W+ELQ 
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH-----EDLNSLKLAELRAIAKSRGLKRFSKIRKSELV
        QRE    P+PD EFELEPE E+Y+LEHE DEMEPELVNLL VSSDV+DTF+DDVKDNE F KH     EDLNSLKLAELRAIAKSR L+ FSK++KSELV
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH-----EDLNSLKLAELRAIAKSRGLKRFSKIRKSELV

Query:  QLLSEAQ
        QLLS  Q
Subjt:  QLLSEAQ

A0A1S3BHF2 rho-N domain-containing protein 1, chloroplastic isoform X72.12e-19676.49Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSD RC+PCSGVSGRAA  S RSL  EH IN  VKF  LNCTSLG SFTC A+SG HRRNPDF KQNR G+SR RNRQNEER+ LEN++ESDLLSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLS+SS TPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKKMEAQG TKGSETVDSLLKLLRKH+VEQGKRSSG+  S  KD SFN VKEN 
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEG+G+SIFGLS NLREK QEP   SF RP SNFQR+SPVPRVKYQPIYPGE SIV+ST G+NS+G+K NG ETGS++K+KVW R+ES+RE W+ELQ 
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH---EDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQL
        QR+T   P+ D EFE+EPE E+Y+LEHE DEMEPELVNLL VSSD++DTF+DD+KDNE F KH   E+LNSLKLAELRAIAKSR L+ FSK++KSELVQL
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH---EDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQL

Query:  LSEA
        LS +
Subjt:  LSEA

A0A5D3DAG1 Rho-N domain-containing protein 11.71e-19676.49Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSD RC+PCSGVSGRAA  S RSL  EH IN  VKF  LNCTSLG SFTC A+SG HRRNPDF KQNR G+SR RNRQNEER+ LEN++ESDLLSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLS+SS TPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKKMEAQG TKGSETVDSLLKLLRKH+VEQGKRSSG+  S  KD SFN VKEN 
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEG+G+SIFGLS NLREK QEP   SF RP SNFQR+SPVPRVKYQPIYPGE SIV+ST G+NS+G+K NG ETGS++K+KVW R+ES+RE W+ELQ 
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH---EDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQL
        QR+T   P+ D EFE+EPE E+Y+LEHE DEMEPELVNLL VSSD++DTF+DD+KDNE F KH   E+LNSLKLAELRAIAKSR L+ FSK++KSELVQL
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKH---EDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQL

Query:  LSEA
        LS +
Subjt:  LSEA

A0A6J1DNJ1 rho-N domain-containing protein 1, chloroplastic-like isoform X19.22e-276100Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSE
        QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSE
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSE

Query:  AQ
        AQ
Subjt:  AQ

A0A6J1DQX2 rho-N domain-containing protein 1, chloroplastic-like isoform X22.44e-27299.5Show/hide
Query:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
        ++DGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
Subjt:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP

Query:  LLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD
        LLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD
Subjt:  LLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD

Query:  EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE
        EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE
Subjt:  EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE

Query:  TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSEAQ
        TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSEAQ
Subjt:  TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSEAQ

SwissProt top hitse value%identityAlignment
Q8L4E7 SAP-like protein BP-735.0e-3536.07Show/hide
Query:  KFPTLNCTSLGASFTCNATSGGHR-RNPDFSKQNRHGFSRGRNRQNEERDGLENLEE--SDLLSSKNGPLLSLSSSTPKSQATATPGPREKEIVELFREV
        K P L    L  S  C+A    HR R+ D ++  + G +R +++  +E+D  EN++E  +D++SSKNGP +SL+S++ + QAT+ PG REKEIVELF+ V
Subjt:  KFPTLNCTSLGASFTCNATSGGHR-RNPDFSKQNRHGFSRGRNRQNEERDGLENLEE--SDLLSSKNGPLLSLSSSTPKSQATATPGPREKEIVELFREV

Query:  QAQLRERAAMKEEKKMEAQGHTKGSE-TVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPI
        QAQLR R   KEEKK E Q   +G   +VDSLL LLRKHSV+Q +R SG      K+ S +Q K ++     + +SIF +  + +E+ ++P  ++F RP 
Subjt:  QAQLRERAAMKEEKKMEAQGHTKGSE-TVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPI

Query:  SNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPDEME
        SNF+R+SPVP VK+QP+     + V++   +N+     + ++          A +E    S  E     E       D +   + EP++ + +    E +
Subjt:  SNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPDEME

Query:  PELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLS
           + + +V   ++++ D  +K +       DL++LK+ ELR +AKSRG+K +SK++K++LV+LLS
Subjt:  PELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLS

Q94K75 Rho-N domain-containing protein 1, chloroplastic5.8e-6044.17Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        G+ LSD RC   S VS R   +   S  ++H+       P        +SF C A+SGG+RRNPDFS+ N+HG+ RG NRQ+  R+  + +E SD+LSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK
        NGPL +LSSS PK QAT++PGPREKEIVELFR+VQAQLR R AA KEEKK+E  ++G  K SETVDSLLKLLRKHS EQ KR     SS G+        
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK

Query:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRES--W
        + D  D+   T     S N     ++   SSF+RP S+F+RKSPVPR +  P Y  E +  +S+          +   T ++ K  V   +E + E    
Subjt:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRES--W

Query:  KELQPQRETGPGPDP---DPEFELEPEPESYELEHEPDEMEPELVN----LLTVSSDVNDTFDDDVKDNENFEKH--EDLNSLKLAELRAIAKSRGLKRF
         E +P+ E+ PGP     +P+ EL+PE  S+  E E D++  ++++    +L V SD +++ DD  +D++  E+   +DL+ LKL ELR IAKSRGLK  
Subjt:  KELQPQRETGPGPDP---DPEFELEPEPESYELEHEPDEMEPELVN----LLTVSSDVNDTFDDDVKDNENFEKH--EDLNSLKLAELRAIAKSRGLKRF

Query:  SKIRKSELVQLL
        SK++K+ELV+LL
Subjt:  SKIRKSELVQLL

Arabidopsis top hitse value%identityAlignment
AT1G06190.1 Rho termination factor4.1e-6144.17Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        G+ LSD RC   S VS R   +   S  ++H+       P        +SF C A+SGG+RRNPDFS+ N+HG+ RG NRQ+  R+  + +E SD+LSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK
        NGPL +LSSS PK QAT++PGPREKEIVELFR+VQAQLR R AA KEEKK+E  ++G  K SETVDSLLKLLRKHS EQ KR     SS G+        
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK

Query:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRES--W
        + D  D+   T     S N     ++   SSF+RP S+F+RKSPVPR +  P Y  E +  +S+          +   T ++ K  V   +E + E    
Subjt:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRES--W

Query:  KELQPQRETGPGPDP---DPEFELEPEPESYELEHEPDEMEPELVN----LLTVSSDVNDTFDDDVKDNENFEKH--EDLNSLKLAELRAIAKSRGLKRF
         E +P+ E+ PGP     +P+ EL+PE  S+  E E D++  ++++    +L V SD +++ DD  +D++  E+   +DL+ LKL ELR IAKSRGLK  
Subjt:  KELQPQRETGPGPDP---DPEFELEPEPESYELEHEPDEMEPELVN----LLTVSSDVNDTFDDDVKDNENFEKH--EDLNSLKLAELRAIAKSRGLKRF

Query:  SKIRKSELVQLL
        SK++K+ELV+LL
Subjt:  SKIRKSELVQLL

AT1G06190.2 Rho termination factor7.6e-4749.06Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        G+ LSD RC   S VS R   +   S  ++H+       P        +SF C A+SGG+RRNPDFS+ N+HG+ RG NRQ+  R+  + +E SD+LSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK
        NGPL +LSSS PK QAT++PGPREKEIVELFR+VQAQLR R AA KEEKK+E  ++G  K SETVDSLLKLLRKHS EQ KR     SS G+        
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK

Query:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTA
        + D  D+   T     S N     ++   SSF+RP S+F+RKSPVPR +  P Y  E +  +S++
Subjt:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTA

AT2G31150.1 ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism1.1e-2639.35Show/hide
Query:  HRR-NPDFSKQNRHGFSRGRNRQNEERDGL-ENLEESDLLSSKNGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRER-AAMKEEKKMEAQGHT
        HRR NPDFS+ N+HGF RGRNR+NE++DGL +   E D+LSSKN                      EKEIVELF++VQ QLR R AA KEEKK E     
Subjt:  HRR-NPDFSKQNRHGFSRGRNRQNEERDGL-ENLEESDLLSSKNGPLLSLSSSTPKSQATATPGPREKEIVELFREVQAQLRER-AAMKEEKKMEAQGHT

Query:  KG---SETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPG
        +G   SETVDSLLKLLRKHS EQ K+   + +S        Q++ +D   E +  S    S+    + ++   + F+RP S+F+R SPVPR K Q  Y  
Subjt:  KG---SETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPG

Query:  EDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTF---
        E    E+++                   S  W +++ + ES  E  P+ E  P P+   E++ EPEPE+   E+EP E EPEL  L +VS    ++F   
Subjt:  EDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTF---

Query:  DDDVKDNENF
        +D+ +++ NF
Subjt:  DDDVKDNENF

AT4G18740.1 Rho termination factor7.9e-0452.63Show/hide
Query:  EKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLL
        EK   + ++KLAEL+ +AK+RG+K +SK+RKSEL++L+
Subjt:  EKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTTTGGACTGTCAGATGGCAGATGCGTACCATGCTCTGGAGTTTCAGGACGAGCGGCCCCAGTCTCTTCTCGCTCTTTATATGTTGAACATAGAATTAATGCACAGGT
CAAATTCCCAACCCTAAACTGTACTTCATTGGGGGCTTCTTTTACGTGCAATGCAACCTCGGGCGGTCACAGGAGAAACCCAGATTTCTCTAAGCAGAATAGGCATGGCT
TTTCTAGAGGCAGAAATAGGCAAAATGAGGAGAGAGATGGCCTTGAAAATCTTGAAGAATCCGATTTATTATCATCTAAGAATGGACCATTACTCTCCCTTTCTAGTAGT
ACCCCTAAATCCCAAGCCACTGCCACCCCAGGCCCAAGGGAGAAAGAAATTGTTGAACTTTTCAGGGAGGTTCAAGCTCAGCTACGGGAGCGAGCTGCAATGAAAGAAGA
AAAGAAAATGGAAGCACAAGGGCACACGAAAGGGAGTGAAACTGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTTGAGCAAGGAAAGAGAAGCAGTGGTAGCA
GCAGCAGTGGGGGCAAGGATTTCAGTTTCAACCAAGTTAAAGAGAATGATCCATACGATGAAGGCAAAGGCACAAGCATTTTTGGCTTAAGTGCAAACCTGAGAGAGAAG
ACACAAGAACCAACCAGATCTTCTTTCAGTAGACCCATATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAATACCAACCAATTTACCCTGGGGAGGACAGTAT
TGTTGAGTCCACTGCTGGTGTGAATTCAAGGGGGTTGAAATTCAATGGAATCGAGACAGGTTCTGAGATGAAGTCGAAGGTTTGGGCACGGGAAGAGTCAAAACGAGAGT
CGTGGAAAGAGCTGCAACCGCAAAGGGAGACAGGGCCAGGGCCAGACCCAGACCCAGAGTTTGAGTTGGAGCCAGAGCCTGAATCATATGAGCTAGAGCATGAACCTGAT
GAGATGGAGCCTGAACTGGTTAATTTATTAACTGTGTCTTCAGATGTCAATGATACATTTGATGACGATGTTAAAGACAATGAAAATTTTGAAAAGCACGAGGACTTGAA
CTCGTTGAAGCTAGCTGAACTGAGGGCAATTGCCAAATCACGCGGTTTGAAACGGTTCTCGAAGATAAGGAAGAGCGAGCTTGTGCAGTTGCTAAGCGAGGCTCAA
mRNA sequenceShow/hide mRNA sequence
GGTTTTGGACTGTCAGATGGCAGATGCGTACCATGCTCTGGAGTTTCAGGACGAGCGGCCCCAGTCTCTTCTCGCTCTTTATATGTTGAACATAGAATTAATGCACAGGT
CAAATTCCCAACCCTAAACTGTACTTCATTGGGGGCTTCTTTTACGTGCAATGCAACCTCGGGCGGTCACAGGAGAAACCCAGATTTCTCTAAGCAGAATAGGCATGGCT
TTTCTAGAGGCAGAAATAGGCAAAATGAGGAGAGAGATGGCCTTGAAAATCTTGAAGAATCCGATTTATTATCATCTAAGAATGGACCATTACTCTCCCTTTCTAGTAGT
ACCCCTAAATCCCAAGCCACTGCCACCCCAGGCCCAAGGGAGAAAGAAATTGTTGAACTTTTCAGGGAGGTTCAAGCTCAGCTACGGGAGCGAGCTGCAATGAAAGAAGA
AAAGAAAATGGAAGCACAAGGGCACACGAAAGGGAGTGAAACTGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTTGAGCAAGGAAAGAGAAGCAGTGGTAGCA
GCAGCAGTGGGGGCAAGGATTTCAGTTTCAACCAAGTTAAAGAGAATGATCCATACGATGAAGGCAAAGGCACAAGCATTTTTGGCTTAAGTGCAAACCTGAGAGAGAAG
ACACAAGAACCAACCAGATCTTCTTTCAGTAGACCCATATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAATACCAACCAATTTACCCTGGGGAGGACAGTAT
TGTTGAGTCCACTGCTGGTGTGAATTCAAGGGGGTTGAAATTCAATGGAATCGAGACAGGTTCTGAGATGAAGTCGAAGGTTTGGGCACGGGAAGAGTCAAAACGAGAGT
CGTGGAAAGAGCTGCAACCGCAAAGGGAGACAGGGCCAGGGCCAGACCCAGACCCAGAGTTTGAGTTGGAGCCAGAGCCTGAATCATATGAGCTAGAGCATGAACCTGAT
GAGATGGAGCCTGAACTGGTTAATTTATTAACTGTGTCTTCAGATGTCAATGATACATTTGATGACGATGTTAAAGACAATGAAAATTTTGAAAAGCACGAGGACTTGAA
CTCGTTGAAGCTAGCTGAACTGAGGGCAATTGCCAAATCACGCGGTTTGAAACGGTTCTCGAAGATAAGGAAGAGCGAGCTTGTGCAGTTGCTAAGCGAGGCTCAA
Protein sequenceShow/hide protein sequence
GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASFTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGPLLSLSSS
TPKSQATATPGPREKEIVELFREVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREK
TQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTAGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPD
EMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIRKSELVQLLSEAQ