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MC06g2259 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC06g2259
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein ROOT PRIMORDIUM DEFECTIVE 1-like
Genome locationMC06:29816988..29817449
RNA-Seq ExpressionMC06g2259
SyntenyMC06g2259
Gene Ontology termsNA
InterPro domainsIPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7804769.1 selenoprotein Pa-like [Senna tora]8.40e-4553.16Show/hide
Query:  MGRFKIAHLLAA-LCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILP----PPSPVDEDGHGHGHGHGHGHQHQHHHRRRH
        M   KI +LL   + +L L+P+ME Q      P   PRPLC+SQ+ALA+YAC RLP    P P  P    PPSPVD  GHGHGHGHGH H H H HR RH
Subjt:  MGRFKIAHLLAA-LCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILP----PPSPVDEDGHGHGHGHGHGHQHQHHHRRRH

Query:  HTHSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRI
        H HS   +ECCRW +EVDS+CVC+ L+ L  FL+RP H +T+ + D C  TYSC G +
Subjt:  HTHSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRI

KAG6571480.1 hypothetical protein SDJN03_28208, partial [Cucurbita argyrosperma subsp. sororia]6.79e-6665.62Show/hide
Query:  MGRFKIAHLLAALCVLV--LIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPV----DEDGHGHGHGHGHGHQHQHHHRRR
        MGR + A+ LAAL  ++  +IP+++ QAWS P     P+PLCSSQFALASYACARLPLNPEP+PI PP SP     D D H H H HGHGH   HHH   
Subjt:  MGRFKIAHLLAALCVLV--LIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPV----DEDGHGHGHGHGHGHQHQHHHRRR

Query:  HHTHSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
        H + SP+ EECCRWAR+VDSECVCDAL HLANF++RPSH FTVAIT+DC+VTYSC GRIK
Subjt:  HHTHSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK

XP_015891580.1 uncharacterized protein DDB_G0272724 [Ziziphus jujuba]6.56e-4554.68Show/hide
Query:  VLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRH-HTHSPVAEECCRWAREVD
        +L+L+P++E Q      P + PRPLC+SQFALASYAC+ +P  P P     PPSP D  GH HGHGHGH H H H H  RH H  SP  E CCRW +++D
Subjt:  VLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRH-HTHSPVAEECCRWAREVD

Query:  SECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGR
        S+CVCD L+HL NFL RP+H ++V + D C VT+SC GR
Subjt:  SECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGR

XP_022155619.1 uncharacterized protein LOC111022709 [Momordica charantia]4.04e-10997.47Show/hide
Query:  MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGH----QHQHHHRRRHH
        MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGH    QHQHHHRRRHH
Subjt:  MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGH----QHQHHHRRRHH

Query:  THSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
        THSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
Subjt:  THSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK

XP_022967638.1 uncharacterized protein LOC111467082 [Cucurbita maxima]3.20e-6869.23Show/hide
Query:  MGRFKIAHLLAALC-VLVLI-PQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRHHTH
        MGR + A+  AAL  VL L+ P++E QAWS P     P+PLCSSQFALASYACARLPLN EP+PI PPPSP  E+GH HGH HGHGH   HHH   H   
Subjt:  MGRFKIAHLLAALC-VLVLI-PQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRHHTH

Query:  SPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
        SP+ EECCRWAR+VD+ECVCDAL HLANF++RPSH FTVAIT+DCIVTYSC GRIK
Subjt:  SPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK

TrEMBL top hitse value%identityAlignment
A0A540M2P4 Uncharacterized protein1.58e-4450.61Show/hide
Query:  MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPP-RPLCSSQFALASYACARLPLNPEPIPILPPP---SPVDEDG----HGHGHGHGHGHQHQHHHR
        M R KI  L      L+ +P+ME Q      PL PP RPLC+SQFALA+YAC+ LP  P P P  PPP   SP  +DG    HGHGHGH HGH+H HH R
Subjt:  MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPP-RPLCSSQFALASYACARLPLNPEPIPILPPP---SPVDEDG----HGHGHGHGHGHQHQHHHR

Query:  RRHHTHS--PVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
         RHH H   P  + CCRW  ++D++CVC+ L HL NFL+RP+H ++V I + C VTY+C   I+
Subjt:  RRHHTHS--PVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK

A0A540MKM3 Uncharacterized protein6.65e-4548.82Show/hide
Query:  MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPP-RPLCSSQFALASYACARLPLNPEPIPI--LPPPSPVDED-----------GHGHGHGHGHGHQ
        M R KI  L      L+ +P+M+ Q       L PP RPLC+SQFALA+YAC+ LP  P P P    PPPSP D+D           GHGHGHGH HGH+
Subjt:  MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPP-RPLCSSQFALASYACARLPLNPEPIPI--LPPPSPVDED-----------GHGHGHGHGHGHQ

Query:  HQHHHRRRHHTHS--PVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
        H HH R RHH H   P  + CC+W  ++D+ECVC+ L+HL NFLIRP+HA++VA+ + C V+Y+C   I+
Subjt:  HQHHHRRRHHTHS--PVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK

A0A6J1DQT3 uncharacterized protein LOC1110227091.95e-10997.47Show/hide
Query:  MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGH----QHQHHHRRRHH
        MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGH    QHQHHHRRRHH
Subjt:  MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGH----QHQHHHRRRHH

Query:  THSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
        THSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
Subjt:  THSPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK

A0A6J1HVN1 uncharacterized protein LOC1114670821.55e-6869.23Show/hide
Query:  MGRFKIAHLLAALC-VLVLI-PQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRHHTH
        MGR + A+  AAL  VL L+ P++E QAWS P     P+PLCSSQFALASYACARLPLN EP+PI PPPSP  E+GH HGH HGHGH   HHH   H   
Subjt:  MGRFKIAHLLAALC-VLVLI-PQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRHHTH

Query:  SPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK
        SP+ EECCRWAR+VD+ECVCDAL HLANF++RPSH FTVAIT+DCIVTYSC GRIK
Subjt:  SPVAEECCRWAREVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK

A0A6P4AZX7 uncharacterized protein DDB_G02727243.17e-4554.68Show/hide
Query:  VLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRH-HTHSPVAEECCRWAREVD
        +L+L+P++E Q      P + PRPLC+SQFALASYAC+ +P  P P     PPSP D  GH HGHGHGH H H H H  RH H  SP  E CCRW +++D
Subjt:  VLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRH-HTHSPVAEECCRWAREVD

Query:  SECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGR
        S+CVCD L+HL NFL RP+H ++V + D C VT+SC GR
Subjt:  SECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-2029.86Show/hide
Query:  PPRPLCSSQFALASYACARLPLN--PEPIPILPPPSPV-----DEDGHGHGHGHGHGHQH----------------------------------------
        PPRPLC+SQ+ALA+YAC+RLP++  P P PI PPP+P+     + D H H H H H H H                                        
Subjt:  PPRPLCSSQFALASYACARLPLN--PEPIPILPPPSPV-----DEDGHGHGHGHGHGHQH----------------------------------------

Query:  -----------------------------------QHH---------HRRRHHTH-----------SPVAEECCRWAREVDSECVCDALIHLANFLIRPS
                                            HH         HRRRHH H           +   +ECC+W +++D+ECVCD L+ L   L +P 
Subjt:  -----------------------------------QHH---------HRRRHHTH-----------SPVAEECCRWAREVDSECVCDALIHLANFLIRPS

Query:  HAFTVAITDDCIVTYSCNGRI
        H +TV + + CIVT+ C GR+
Subjt:  HAFTVAITDDCIVTYSCNGRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGTTCAAAATTGCTCACCTATTAGCAGCATTGTGTGTTTTAGTTCTGATACCCCAAATGGAGGGGCAAGCATGGTCACAGCCGTCGCCGTTGTTGCCTCCACG
TCCTCTATGTTCTTCACAATTTGCACTGGCGAGCTATGCATGTGCGAGGCTGCCTTTGAACCCAGAACCCATTCCAATTCTTCCGCCTCCTTCGCCGGTGGATGAGGATG
GACACGGGCACGGGCACGGGCACGGGCACGGCCATCAGCACCAACACCACCATAGGCGCCGCCACCACACCCACTCACCGGTGGCAGAGGAATGTTGTCGATGGGCGAGG
GAGGTGGATAGCGAATGCGTGTGTGACGCATTAATTCACTTGGCCAACTTCCTGATTCGACCCTCTCATGCATTTACCGTCGCCATCACAGATGATTGCATTGTCACTTA
CTCGTGCAATGGACGAATCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGTTCAAAATTGCTCACCTATTAGCAGCATTGTGTGTTTTAGTTCTGATACCCCAAATGGAGGGGCAAGCATGGTCACAGCCGTCGCCGTTGTTGCCTCCACG
TCCTCTATGTTCTTCACAATTTGCACTGGCGAGCTATGCATGTGCGAGGCTGCCTTTGAACCCAGAACCCATTCCAATTCTTCCGCCTCCTTCGCCGGTGGATGAGGATG
GACACGGGCACGGGCACGGGCACGGGCACGGCCATCAGCACCAACACCACCATAGGCGCCGCCACCACACCCACTCACCGGTGGCAGAGGAATGTTGTCGATGGGCGAGG
GAGGTGGATAGCGAATGCGTGTGTGACGCATTAATTCACTTGGCCAACTTCCTGATTCGACCCTCTCATGCATTTACCGTCGCCATCACAGATGATTGCATTGTCACTTA
CTCGTGCAATGGACGAATCAAG
Protein sequenceShow/hide protein sequence
MGRFKIAHLLAALCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPEPIPILPPPSPVDEDGHGHGHGHGHGHQHQHHHRRRHHTHSPVAEECCRWAR
EVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIK